Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->LBD16       <---------ANAC58       <---------ANAC55(2)       --------->ANAC55(2)       <---------ANAC58       <---------ANAC46      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    --------->ARR14(2)    --------->AGP1                                    --------->AHL20(2)                        <----    <---------ARR14(2)                                <---------AHL20(1)                        ----- -------YAB1                                          --------->AHL20(1)                        <---- ----->AHL20(2)                                      <---------AHL20(2)                        ------ ---->AHL20(2)        <---------HSFB2a(2)     ------->GAMYB  --------->YAB1                    ------ -----AHL20(2) ------->TEIL             --------->TOE1(3)   <---------YAB1                     ------ ----YAB1   <---------ANAC46            --------->TOE2(3) --------->YAB1           <---------AHL20(2) --->ICU4<---------MYB52(1)             --------->YAB1<---------AHL20(2)        --------->ARR11(3)--- --ICU4<---------ANAC55(1)           <-----------GT1 --------->AHL20(2)  <----------ID1   --------->ZAT6 >ICU4<-------TEIL    --------->HSFB2a(2)  --------->MYB52(1)<-----------GT1    <---------ARR11(3)---   aatatagatccgtgatgtatgtctctagacgttatatataaaccataacagcaaaataaattataacaacacatagggaaaagattttatgaccactacc  26189000 -----MYB59 ---------->AGL15                                        --------->ARR11(3) -----------AGL15                                        <---------ARR11(3) ----------->AGL3                                    ---------->DOF2                        <-------- ----------->AGL1                             ---------->DOF2  <-----------GT1 <---------YAB1 ----------->AGL2                          --------->TOE2(3)<---------AHL20(2)<-----------TGA1    --- --->MYB83--------->YAB1                   <----------DOF2 --------->AHL20(2)--------->YAB1 --------- --->MYB46(1)                        <------NtERF2--------->TOE1(3)--------->LBD16      --------->ZAT18   aaatagaggcagtcatagataacaaataacaaatgaggcatcgaactttaaagcttaaagatttaataccgcatttgtatcgtcattaagtgcgataatt  26189100                                            --------->AHL20(1)                                            <---------AHL20(2)                                        --------->AHL20(1)                                        <---------AHL20(2)                                        --------->AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(2)                                   --------->AHL20(2)                              --------->LBD16                             --------->HSFB2a(2)  <-----------GT1     --------->O2                     <-----------RAV1(2)<---------AHL20(1)     <---------ANAC58      --------->ANAC55(2)    <---------HSFB2a(2)<---------AHL20(2)    <---------O2----------->GT1   --------->ICU4 --------->WOX13(1)--------->AHL20(1)     <---------MYB52(1) ---------->DOF2<------- -ATHB51 <-----------GT1<------ZmHOX2a(1)   <---------AHL20(1) <---------ANAC46  ----------->GT1 -------->GT1   <---------YAB1----------->GT1   --------->AHL20(2)<-----------HVH21  ----------->ARR10 >ICU4<---------ANAC55(2)   <---------LBD16 --------->AHL20(2) <---------ANAC58 --------->DAG2      <   ctgtaattatgtaacgttgtcattcaggagtccggaaattaattaattaattaaactatccgttgtcgtgtcacgagaataaaaggttaaattcgccgtg  26189200                        ----------------->AGL1                       --------->PCF2                       ------>NtERF2                      <---------PCF2                      --------->TCP15(1)                      --------->TCP20                                             --------->ANAC58                     <---------TCP23                   <-----------RAV1(2)        --------->ANAC58                     <------NtERF2              <---------AHL20(2)                --------->ANAC46                     <---------TCP15(2)        --------->AHL20(2)               <---------ALFIN1                     --------->ATERF1(1)       <---------AHL20(2)       --------->ANAC58 --ANAC46 <------ZmHOX2a(1)                    --------->AHL20(1)       --------->ANAC58 ---------YAB1     --------->ALFIN1      <---------At4g35610      <-----------HVH21------------------   tttttattaagaggagactaggtggggcccaattgagacagacagcaaatttaatgaacaggtgtccatgtgagacgcattcacacgctctctctctcaa  26189300                                                                                        >>>>>>>>>TBF1                                                                         <---------ANAC58                                 --------->LBD16                         <---------ANAC46                                <---------HSFB2a(2)                      <---------ANAC58        <---           <---------ICU4       --------->HSFB2a(2)        ------>ZmHOX2a(1)  <-------GAMYB      ----    <----------DOF2          <---------MYB52(1)           --------->TOE2(3)  --------->ALFIN1-------- ----->TaNAC69(2)       <-----------GT1                  *TSS       <----------DOF2  >>>>>>>>>TBF1<--   gtctctctttccattactactactataaaccgttctgggaacttgatcaacatttttaatcctaaaacttcttttgagtgtgttgaagaagaagaagatt  26189400                       --------->ALFIN1                                               <---------MYB52(1) ------AHL20(2)     --------->DAG2                                      ----------->HVH21 ----->AHL20(2)    ---------->DOF2                                    --------->ANAC55(2) <----------DOF2 --->GT1       --------->LBD16                 <----------ID1      <-------TEIL     <---------ANAC58 -------YAB1  --------->LBD16>>>>>>>>>TBF1 >>>>>>>>>TBF1       <---------YAB1       <---------ANAC58   aaaattcactaaaaacccgagaaaagtggaagaagaaggaaggaagaagaagacaagagagcattctgattcatgtgactctggtttcgtttctttctgt  26189500                                                <------MYB83                                                <---------MYB46(3)                                                <------MYB46(1)                                               <---------AtMYB61                                              <---------MYB52(1)          <---------ANAC58                    <--------P          <---------ANAC58                    <---------MYB55(1)          <---------ANAC46                   <-------GAMYB         ---------->ID1                     <---------MYB46(3)                                      -   --------->ZAT2                    <---------ANAC58                    --------->ATHB12           <   --------->At4g35610               <---------ANAC58                  <---------WOX13(1)           -   <---------ZAT2<---------LBD16  <----------DOF2                    --------->ATHB12               =   <---------ZAT14             <---------ARR11(3)                   <---------YAB1                  -   <---------At4g35610         --------->ARR11(3)                   --------->ICU4 ---------->DOF2 <-   --------->ZAT14  <------NtERF2------>ZmHOX2a(2)          <---------LBD16<---------WOX13(1)  <-----   gtctctgctgtgtcgttttctcggcatatttctgatctttcgttctcggttggtttttggtttctgggtattgattgattgattcaaaagtcttcaactt  26189600            ------>ZmHOX2a(2)          --------->ARR14(2)          <---------AGP1          <---------ARR14(2)          --------->ARR11(3) -------->HSFB2a(2) ---------HSFB2a(2) -------->LBD16          <---------MYB52(1) ==================HOX2a_HOX2a                            ------->TEIL ----->ZmHOX2a(1)   <-----------GT1                  <------ZmHOX2a(1)  ---------->DOF2--------->ARR14(2) --------LBD16    ---------->TaMYB80             ---------->DOF2 <---------YAB1        <---------ARR14(2) -----DOF2<---------ARR11(3) <-----------GT1----------->GT1   ------>ZmHOX2a(1)        <---------GLK1(2)   tcctggaaactggatctgggtttatccgtttttactcgtctgagaagagaaaaaaggatgaatccttatgatgcgaaagacagaagatggattctctcta  26189700                    --------->HSFB2a(2)              <-----------HVH21                          -----            <---------MYB52(1)                    --------->At4g35610             <----------DOF2         ---------->ID1----------->RAV1(1)        <---------At4g35610         <---------CCA1(2) <----   <<<<<<<<<TBF1    <---------HSFB2a(2)  ---------->ID1  <-------GAMYB     <-----------GT1     <-----   tgttcttcttcgtcgttttgttctgcaacaacgtttcgacttcgtcttcttcatctgtgagttgggcaaaactaaattttctatctttccctgtttttct  26189800                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                               ------                    --------->LBD16                                                            ------                    <---------LBD16                                                            ======                   <---------LBD16                                                           --------             <------MYB83                                                                    --------             <------MYB46(1)                                                 --------->ZAT18 <-------           <--------P--------->LBD16                    <----------DOF2 ---------->DOF2     ---------         <---------MYB46(3)               <----------DOF2            --------->HSFB2a(2) >>>>>>>>>MYB98        <---------AtMYB61               <---------At4g35610  <---------ANAC58--------->ZAT14<-------- ---->HSFB2a(2)    <---------ANAC46     --------->At4g35610  <---------ANAC58<---------ZAT14<-------- -----HSFB2a(2)   <---------LBD16  --------->RVE1(1)  ---------->ID1 <---------HSFB2a(2)<-----------GT1 ----LBD16<-------GAMYB     ----------->GT1          <-----------GT1<---------LBD16    <-----------GT1   gggatttgttttggttggactccggggaaattgcaaaatatcagcttttgggttttttctttttcttgtctctggaaagttcactgattttaacatatcc  26189900  Previous    Next  AGI:  At5g65470.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61608.1); similar to unknown [Populus trichocarpa] (GB:ABK95421.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78778.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 26189357    to: 26192259    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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