Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------YAB1                                                 <---------GLK1(2)                                                 <---------ARR11(3)                                                 --------->ARR11(3)                                               <---------TOE1(3)                 ---------->ID1                <---------TOE2(3)                            ---------      ---------->DOF2                      <----------DOF2                                  <--------   ttaaaaactaaagagatttgttgtaatgctattgggctaattgggctttaagattttgtaattgggctcagttcatcatatatgaaaatagtagacgaca  26174700                                 ------->MYC2                                 <-------MYC2              --------->ANAC46   ------->MYC3                                           <----------DOF2              <----------ID1     <-------MYC3                                   --------->ANAC58            <---------DOF5.7(2)------->TEIL                                     --------->ANAC58     ---------->DOF2         <---------ZAT14                                    --------->ANAC46    < ---------->DOF2             --------->ZAT18                  <---------DAG2   ------->GAMYB<-------- >ANAC46   <---------WRKY12  <---------ZAT18               <-----------GT1 --------->MYB46(3)  <----- --ID1 --------->DAG2        --------->ZAT14  <----------DOF2 <----------DOF2 <---------ALFIN1 ------   aaaaaaagaaaggtaaacgacaaaaaacaagtgcacgttgattccctcctttcttctctattcactttctctctctaacaacacaccattctttctgatt  26174800                                                                 <------NtERF2                                                                 <---------MYB52(1)                                                                <-----------HVH21                                                                <---------ATERF1(1)                                                                ------>NtERF2                                                               --------->DEAR3(1)                                                               --------->RAP2.3(2)                                                               --------->O2                                                               <---------O2                                                              <------NtERF2                      ----                                                              --------->RAP2.3(1)               -----                                                              --------->RRTF1(1)                -----                                                             ------>NtERF2                      -----                                                             <---------ATERF1(1)               ------                                                           <---------LBD16                    <------                                                      ------>ZmHOX2a(1)                       ------>NtERF2                                                      <----------DOF2                        --------           <----------DOF2                           --------->TOE2(3)                       --------   <<<<<<<<<TBF1                                  --------->ARR14(2)                        <-------- <<<<<<<<TBF1                            --------->At4g35610 --------->LBD16        <---------ALFIN1 -YAB1<<<<<<<<<TBF1                      <---------At4g35610--------->ANAC46      ------>NtERF2------ -------------------ANAC81  <----------DOF2       <---------ARR14(2)             --------->DEAR3(1) --->GLK1(1)   <-----------GT1         <-----------RAV1(2) --------->MYB46(3) --------->ANAC46-------   tcttcttcttcttcttttctctctctctagctttaatctctccagatgcccaaatcctttacccgccgtcgcttctctaatcgccaccatcttctccgcc  26174900      ------>MYB46(1)      ------>MYB83 <-----------GT1 -->NtERF2 ---->RAP2.3(2) ---->RAP2.3(3) ---->DEAR3(1) --->ORA47(2)                                                                      <-------TEIL ---ATERF1(1)                                                           <---------DAG2           <--- ->ANAC46                                        ------>ZmHOX2a(1)--------->WOX13(1)         <------- ->DEAR3(1)                                ---------->ID1      --------->TOE2(3) --------->ARR14(2) < -LBD16                            --------->DEAR3(1)     ------------>CBF     --------->ANAC46 <---- --->RAP2.3(1)                  <---------ALFIN1 --------->At4g35610 <-----------GT1  <---------CCA1(2) -->LBD16                    --------->AtMYB61------>ZmHOX2a(1)--------->YAB1 --------->LBD16--------   gtcttaccttccacatttactcttactctcaccatcaccgtcttcgtcctcctctgcatcaccaatgttaatcacctttccacgattcgtctcttccaga  26175000              --------->O2              <---------O2              =========================================bZIP_DOF              <---------WOX13(1)         <---------At4g35610       --------->ARR14(2)                       <------------CBF         --------->At4g35610       <---------ARR14(2)                      --------->ATHB12  <------MYB83       <---------ANAC58   <---------YAB1                          <---------MYB52(1)         <------MYB46(1)       <---------ANAC58  <---------AHL20(2)                      <-------GAMYB <---------MYB46(3) ------WOX13(1)         --------->YAB1                          <---------ANAC58<---------ANAC58 --HSFB2a(2)  <---------TGA1a     <---------MYB52(1)            <---------ANAC58<---------ANAC46 ---------GLK1(2)   <---------TOE2(3)       ---------->DOF2     <---------ANAC46<---------ANAC58 --------CBF  --------->TGA1a    <---------DEAR3(2)   --------->TOE2(3)   <---------YAB1     <------- ->HSFB2a(2) <---------TOE1(2) <---------LBD16        --------->TOE1(3) <------------CBF <-----------RAV1(1)   ttgattctggcttctcacgtttgagattataatgccggtttctcttgaaagtgaaaccttagggtttcgttgtctattgattgggtgtatgatgttggtt  26175100                         ------>ZmHOX2a(2)                        --------->CCA1(2)                        <------ZmHOX2a(2)                       --------->ARR11(3)                       <---------ARR14(3)                       <---------ARR11(3)                       <---------ARR14(2)                       --------->ARR14(2)                       --------->ARR14(3)                      --------->GLK1(1)              <------NtERF2             --------->LBD16             ------>NtERF2             --------->ANAC58                                                 <------ZmHOX2a(1)             --------->ANAC58                                             --------->DEAR3(1)            --------->DEAR3(1)                                           <------NtERF2          <----            <---------ATERF1(2)                                         ------>NtERF2        <------NtERF2            --------->ATERF1(2)                                        --------->DEAR3(1)   ---------      <---------GLK1(2)--------->AGP1                            <----------DOF2           <---------DEAR3(1)    <---------YAB1    <---------GLK1(1)                         <---------ANAC58           <---------ANAC46  <---------At4g35610----------->ARR10                  ---------->ID1--------->MYB46(3)  <---------LBD16 --MYB46(3)<---------LBD16                     ----------->GT1  <---------ANAC58--------->GLK1(2) <--   tttcttctgattcgccggcaatggagatctgcttctgtgagaagagaagaggtgattcgtctcattgctttagccaccgaggaatcttatttggcggagg  26175200                            ----------->ARR10          <---------ALFIN1  <---------ARR14(2)        ------>NtERF2      --------->ATERF1(1)        >>>>>>>>>>>>>>>>>LFY--------->ARR14(2)        --------->LBD16    <------NtERF2       --------->ANAC58   --------->LBD16       --------->ANAC58   <---------ATERF1(1)     --------->SPL7      <---------DEAR3(1)                 <---------MYB52(1)   <---------SPL7        <---------ANAC46                 <---------ANAC58  --------->ZAT6          <  <---------ANAC58    <---------RRTF1(3)                  <---------ANAC58  --------->AtMYB61       -  <---------ANAC58    <---------RRTF1(2)                  <---------ANAC46 --------->MYB46(3)       - <-------TEIL         <---------RAP2.6(2)           <---------MYB52(1)    ------>MYB46(1)           < --ZmHOX2a(1)         <---------RAP2.3(2)          <-------GAMYB          ------>MYB83             <- >LBD16--------->ANAC46 <---------LBD16         <---------At5g28300       -------->P               <- -------HSFB2a(1)    <---------At5g28300       <-----------GT1        --------->ANAC46          <----   aagttcgtcccgccactgttgattacggcggagactcggtttctgatgtttaccgttgtgccgtttgtctataccctaccactactcgttgctctcagtg  26175300         <---------MYB52(1)        <-------GAMYB --------->MYB52(2)       --------->MYB52(2)       <---------MYB46(3)<---------ARR14(2)     <---------MYB52(1)  --------->ARR14(2)                                                 <-------- ---------ARR14(2)   <---------TOE1(2)                         <-----------ARR10            <-------- -------->ARR14(2)  <---------MYB52(1)                         <---------ARR14(2)      --------->ARR11(3) -------->GLK1(2) --------->MYB52(2)        --------->LBD16    --------->GLK1(2)       <---------GLK1(2) -----------ARR10 <---------ANAC58         <---------TOE1(1)   --------->ARR14(2)      <---------ARR11(3) --------CCA1(2)  <---------MYB46(3)    <---------ARR14(2)    <---------GLK1(2)--------->DAG2 --------GLK1(1)  <---------ANAC58      --------->ARR14(2)  <---------TOE2(3) ---------->DOF2  <----- -----ZAT18      <-------TEIL------>ZmHOX2a(1) <------ZmHOX2a(1)            <------ZmHOX2a(1)--------   caaatctgttcgttactggttcgttcgtttcctctcaattcaaatccgaggatgactagtttaagaatctgatcacgaggaaaagtttagatttttaatt  26175400                                --------------->AGL15                                <---------------AGL15                                <----------DOF2                               <-----------------AGL3                               --------------->AGL15                       <---------O2                               <---------DAG2                             <------NtERF2             -                     <---------AHL20(2)                                  ------>NtERF2          -----                     --------->AHL20(2)         --------->ANAC58        ----------->HVH21       <---- -AHL20(2)       <------ZmHOX2a(2)              --------->ANAC46        <---------ETT(2) <xxxxxxxxxxx -YAB1          --------->ARR11(3)        <---------MYB46(3)     --------->ZAT14       <------ZmHOX2a(1) ----WOX13(1)   <---------ARR11(3)       <--------P         <---------GLK1(2)          ============== ->ATHB12   ---------->DOF2 <-----------GT1     --------->ANAC58 <---------ZAT14   --------->ICU4   =   ggttctgtttcttaaaaagatcatttattgttacctttttttggtagttcaagcaagtgtcaaattcttcactggcgacgaggtcataaggaagaatgtc  26175500           --------->YAB1          <---------YAB1          --------->ICU4                            --------->ZAT6        --------->YAB1                         ----------->GT1                                     <-        <---------ICU4                        <---------YAB1                                       <-       --------->ICU4                   --------------->AGL15                                    ----  ----------->RAV1(2)                   <---------YAB1      <---------ARR11(3)                   <--- ----->ZmHOX2a(2)                       <---------------AGL15                                 <------MYB83 ---->ETT(2)                           <-----------------AGL2             <---------WOX13(1) <------- -----ETT(2)                  <---------KAN4(2)--------->YAB1          <---------YAB1        -------- xxxxxxxxxsmallRNA(si3)   <------ZmHOX2a(1)<---------YAB1   --------->ARR11(3)   <---------TOE2(3) <- ======HOX2a_HOX2a ---------->DOF2     <-----------------AGL3       <----------DOF2          <------- ================================HOX2a_HOX2a  <---------TOE2(3) <-----------GT1---------->DOF2<------MYB46(1)   gatcgcctgattatgatgaagaaaaggaggagtatgttcaatctgattatggtaacacttgagattttagcttttgatttataaaggtttcacatttggt  26175600  Previous    Next  AGI:  At5g65450.1    Description:  ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein. Identical to Ubiquitin carboxyl-terminal hydrolase 17 (UBP17) [Arabidopsis Thaliana] (GB:Q9FKP5); similar to UBP16 (UBIQUITIN-SPECIFIC PROTEASE 16), ubiquitin-specific protease [Arabidopsis thaliana] (TAIR:AT4G24560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22677.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394); contains InterPro domain Zinc finger, MYND-type; (InterPro:IPR002893) Range:  from: 26175089    to: 26178322    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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