Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ARR14(2)                   --------->ARR14(2)              ------>MYB46(1)                                    <---------ALFIN1             <------          --------->ARR11(3)                                --------->ARR14(2)           --------->YAB1          <---------ARR11(3)                                <-----------ARR10            <---------ICU4     --------->GLK1(2)                                      <---------ARR14(2)          --------->ICU4 --->AHL20(2) ------>MYB83        <---------CCA1(2)        <---------CCA1(2)            <---------ATHB12   aatagagaatcagaccttccaaatccaattgagggcatctcttcttccaacattcaaatccaaatctccacttctaagtctcttgatgtaatcatcactt  26160800                                                                             ----------->GT1                                                                          <---------ARR14(2)                       --------->AtMYB61                                 <------ZmHOX2a(1)       <---                    --------->ANAC46                                   <---------TOE2(3)     <-------               ------>ZmHOX2a(1)--------->YAB1                     ----------->RAV1(2)       --------   <-----------RAV1(1) <---------ALFIN1   ------>ZmHOX2a(1)        <---------At4g35610       -------- ---O2 <---------At4g35610     <---------YAB1                      --------->At4g35610       <-------   ggcaaatgctgcttctccttctccaccatctccatgataatctcctcactctccgattgagaaaaacccatctgaggaatcgaaatttcaatcggagttt  26160900       --------->YAB1       <---------ICU4                                            ------>ZmHOX2a(1)      <---------ATHB12                                           <---------At4g35610    --------->WOX13(1)                                           --------->At4g35610    --------->YAB1                                        <---------ARR14(2)   --------->MYB46(3)                                     --------->ARR14(2) ------ANAC46                                          <---------HSFB2a(2) --HSFC1(2)                                            >>>>>>>ZML2 ->HSFC1(2)            <---------TOE2(3)            --------->AGP1  ------>NtERF2  <---------ZAT6 ->HSFB2a(1)      --------->YAB1          ---------->DOF2 <---------GLK1(2)    ------->GAMYB --HSFB2a(1)      <---------ICU4 --------------->AtSPL8--------->HSFB2a(2)  ----------->RAV1(1)   cgtcaacaatcatgccctcatcatcaacgttgctctctgtacataaaagactcagttctagattctcctctgccattacaacagagtgttcatgtaagaa  26161000                <------MYB83                <------MYB46(1)                          --------->HSFB2a(2)               --------->MYB59                  <---------GLK1(2)                            --------       ------>ZmHOX2a(1)                   --------->TOE2(3)              ---------->DOF2 <----------DOF2     ------>ZmHOX2a(2)       ---------->DOF2<---------MYB52(1)   <---------LBD16 --------->ATHB12   aaattgatcctttgtatttggtaatcgatctaaaaggaactgtatcgttagattgtcatctagagattggggaagtgaaagaaagattgggtctttgata  26161100                                                     ---------->DOF2                                             --------->At5g28300                                            ----------->GT1                         <------ZmHOX2a(1)                  <------ZmHOX2a(1)       <---------ANAC46       <----------DOF2  <---------TOE2(3)           <---------ANAC46            <--------P   --------->AHL20(2)      <---------AHL20(2)           --------->O2                --------->ALFIN1    --------->ALFIN1 <---------YAB1         -- ->YAB1    <---------O2               <-------GAMYB <---------AHL20(2)<----------DOF2      <---------TOE2(3)   tttctgtatgccctcgtggaggaaggggtttttgttttggggttgagggtaaaattaaagggtgaagcttttcttttttttattgaggaagttaagaaat  26161200                                 <------ZmHOX2a(1)                                       <---------ARR11(3)                    <------------CBF                                                     --------->ARR11(3)       <---------TOE1(3)<---------ANAC58                                       <---------AHL20(2)       <---------TOE2(3)<---------ANAC46        <---------AHL20(2)         ----------->GT1        --- --------->GT1     *TSS <---------ANAC58    <-----------TBP    ----------->GT1--------->AHL20(2)-----   gtggtttttagggtaagatggagattgtgtgagaaggagagaggctatatataatggtgaagaagatgaaaaatgtaagataaaatttgaagattttaga  26161300                                                                                        <------MYB83                                                                                        <------MYB46(1)                                                                                    --------->MYB111(1)                                                                                    --------->MYB52(2)                                                                                    --------->MYB46(2)                                                         <------MYB83               --------->MYB111(2)               ----------->GT1                           <------MYB46(1)         ------------>MYB.PH3(2)            --------->YAB1                   --------->YAB1       <---------At4g35610<-------GAMYB   <------------CBF --------->MYB46(3)      <---------YAB1<------ZmHOX2a(1)    --------->DAG2 -------->GT1 <---------YAB1             --------->ICU4<--------P<---------TOE2(3)  <---------MYB46(3) ----->DOF2<---------YAB1          ----------->GT1  --------->ALFIN1          ---------->DOF2   aagtgaattgactatcatggtaacaaatgtgagaagttggaaaattatgaaaatgtggtaggaaattgaggtgagaattgaaaagttagttggttttatt  26161400                                                 <------MYB83                                                 <------MYB46(1)                                                --------->MYB59                                            <---------MYB46(3)                                         <---------MYB46(3)    ------>NtERF2                                         <------MYB83         --------->ANAC46                                         <------MYB46(1)  --------->CCA1(2)                                        <---------AtMYB61 --------->GLK1(1)                            ----------->GT1<--------P     <---------GLK1(1)                        ------->TEIL   <---------MYB52(1)--------->ARR14(2)                     <---------YAB1<---------ARR11(3)    <---------GLK1(2)                <---------At4g35610--------->ARR11(3)    <---------ARR14(2)   cgttgtattttagtttttagatgatgaatcgagtgaatatcgttggtagttcggtatcagatttgcgccataagttttttggaatttgtatttcggtctt  26161500                                                                  --------->YAB1                                                                  <---------ICU4                                          --------->AHL20(1)     <---------ATHB12                                          <---------AHL20(2)     <---------YAB1                                          <---------AHL20(1)  <---------AHL20(2)                                          --------->ARR11(3) --------->AHL20(2)          <---------AHL20(2)                 <---------TOE2(3)  ----------->GT1        --------->ARR11(3)      --------->ANAC55(2)         --------->MYB52(1)         --------->YAB1         <---------ARR11(3)  <----------DOF2      -   gtatgcatagttaacagttaacatttttgtatattcaatggtaaaatattgaatgttgaaagatttaatcatagtatatgtctttacatattttttgata  26161600                     --------->YAB1 --------->AHL20(2)             <---------ANAC58      --------->AHL20(1)             <---------ANAC58      <---------AHL20(1)             <---------ANAC46     --------->AHL20(2)                                        <--------       <---------AHL20(2)   --------->At5g28300                                             ---------       --------->AHL20(2)  ----------->GT1                                                  <--------      <---------AHL20(2)  --------->ZAT6                                                    ---------      --------->AHL20(2)--------->YAB1                                                 <------ZmHOX2a(1)   <---------ICU4  <---------AHL20(2)                                           --------->ARR11(3) -------->YAB1     --------->AHL20(2)                                           <---------ARR11(3) <-   tttcataattttattccttgttttaataacagtaaaatatatatagtttgactaatagtttaaaacagtattgaattctataaatcttaggaaatatttt  26161700  Previous    Next  AGI:  At5g65420.1    Description:  CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator. Identical to Cyclin-D4-1 (CYCD4-1) [Arabidopsis Thaliana] (GB:Q8LGA1;GB:Q9FKP7;GB:Q9XFR7); similar to CYCD4,2 (CYCLIN D4,2), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G10440.1); similar to cyclin D2.1 protein [Nicotiana tabacum] (GB:CAA09852.1); contains InterPro domain Cyclin D (InterPro:IPR015451); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367) Range:  from: 26158696    to: 26161219    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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