Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ----->AHL20(2)                                                    <-----------RAV1(1) -----AHL20(1)                                                 <---------DAG2 ---->AHL20(1)                                                 <----------DOF2 ->YAB1             --------->AHL20(2)                      ------>NtERF2<---------REM1(1) ->AHL20(2)         <---------AHL20(2)                   <---------At4g35610 --AHL20(2)     <---------AHL20(2)       ---------->DOF2 --------->At4g35610            ----------->RAV1(1)   tatatagccaagaagcatatatttatttaggggaagagaatgctaaagcatgagttttgtgctggctttatgttgttgtaactcttagagcaacatgtat  26148300                                                                        <-----------GT1                                --------->ATHB12                        --------->CCA1(2)                               <---------YAB1                   --------->YAB1                         ---------->DOF2                       --------->ICU4                        <---------AHL20(2)                     <---------YAB1                       <---------AHL20(2)                  <---------GLK1(2)                 --------->ANAC55(2)                --------->DAG2   ------->TEIL          <---------ZAT6             <----------DOF2 --------->YAB1        ---------->DOF2<---------YAB1         --------->MYB52(2)   tcacttctaactgaactttacataatttaaagcatgatttggattatctaaaaaaaagttagattatgatgaatatacaagttttttttgttagtggaaa  26148400                            --------->ANAC55(2)                  <---------GLK1(2)                        ------>ZmHOX2a(2)                 <---------At4g35610               --------->AHL20(1)                        --------                 <---------HSFC1(2)                --------->ARR11(3)                        --------                 --------->HSFC1(2)                <---------AHL20(1)                        <-------           <---------HSFB2a(2)                  --------->AHL20(2)       <-----------GT1     <-------           --------->HSFB2a(2)      <---------YAB1<---------AHL20(2)  --------->YAB1    ----------->GT1    <---------CCA1(2)       --------->YAB1      <---------AHL20(2)<---------YAB1 ---------->DOF2   actctcatttcttcgagtaagcttctccatacataattttcattgtctatatatatattgatctatttgtaattgtaactcttgaaagtttggaaaatat  26148500                                             --------->GLK1(1)                             <---------ARR14(2)       --------->ARR14(2)                             <---------MYB52(1)       <---------ARR14(2) ->ARR11(3)                  --------->ARR14(2)       <---------GLK1(2) ->AHL20(1)                 <---------RAP2.6(3)      <------ZmHOX2a(1)                              < --ARR11(3)         --------->CCA1(2)  <---------ARR14(2)                                     ------- --AHL20(1)       --------->YAB1       --------->ARR14(2)    <----------DOF2           <----------DOF2   ttgtaataagagataaacaatgatatgggccgatatttgcgaaactgatttcaaaggattcttctttatgggcctatagagttttgggcctttctaccaa  26148600          --------->ANAC58                                                   <------ZmHOX2a(1)          --------->ANAC58                  --------->TOE2(2)        <---------At4g35610    <---------HSFB2a(2)         ------------>CBF                     --------->At4g35610      <------    --------->HSFB2a(2)        <------ZmHOX2a(1)    *TSS         <-----------HVH21   ------>ZmHOX2a(1) ----------DOF2         <---------ZAT18     --------->TOE1(2) <---------ANAC58--------->ARR14(2) -->AtMYB61             --------->ZAT18    ----------->RAV1(2)<---------ANAC58<---------ARR14(2)   --   aactttcgcgacaagcgatatgttagggcacaaggacaattcgaaacctgagaagagagctagagcttgtcagatgttaggatactcctatccttgtttc  26148700                                         ----------->RAV1(2)                                   --------->GLK1(1)                               <---------ANAC46                              <------NtERF2                              --------->ATERF1(1)                              --------->RAP2.3(1)                             ------>NtERF2                             <---------ERF1                             <---------ATERF1(1)                             <---------RAP2.3(1)                             <---------RRTF1(1)                            <---------RRTF1(2)                            <---------RAP2.3(3)                            <---------RRTF1(3)                            <---------DEAR3(1)                            <---------RAP2.3(2)                         --------->ALFIN1--------->At4g35610                      <---------DEAR3(1) <---------At4g35610                     <------NtERF2--------->ARR14(2)                    ------>NtERF2 <---------ARR14(2)              --------->MYB52(1)--------->LBD16              <---------DOF5.7(2)<------NtERF2                                                     <-            --------->DOF5.7(2)--------->RAP2.3(2)                                                 --           --------->At5g28300<---------LBD16                                                      <-           <-------GAMYB--------->ATERF1(1)                                                     -----         <---------ANAC46<---------DEAR3(1)----------->HVH21             <---------RAP2.6(3) <-------         <---------TOE2(3) --------->ATERF1(1)                    <---------AHL20(2)        <-------- -----GT1<---------TOE1(3)<---------ATERF1(1)                    --------->AHL20(2)         <-------- ------->MYB52(1)  <---------DEAR3(1)  <-----------GT1        <---------GLK1(2)       --------->AGP1   caaacgggattacggttaacgacggcgatggcgccggaaattcacctgaaaccgaagaaccctagaattttatgccttcatggattcagaactagtggtc  26148800                                                                                          <---------GLK1(1)                                                                                      --------->LBD16                                                                                     <---------LBD16                                                                                    <------NtERF2                                                                                    <---------LBD16                                                                                   ------>NtERF2                                                                                   --------->MYB52(1)                                                                                  <---------ALFIN1                                                                                 ----------->HVH21                                                                                <-----------HVH21                                                              <---------ANAC58  ------>NtERF2           <---------RAP2.6(3)                 ------>ZmHOX2a(2)               --------->LBD16         <-----------------AG                --------->ARR14(2)                --------->ANAC46         <-----------------AGL1              --------->ARR11(3)                ------>NtERF2     ==== --------GLK1(2)            <---------SPL7   <---------ARR14(2)          <---------DAG2--------->LBD16 ------->ARR14(2)           <------NtERF2    <---------ARR14(3)          ============================ --------ARR14(2)           --------->LBD16  --------->ARR14(3)          <----------DOF2  --------->GLK1(1) ---->ETT(1)                ----------->HVH21<---------ARR11(3)        <-----------------AGL1    ---- --MYB46(3)--------->LBD16 --------->RAP2.6(2)<------ZmHOX2a(2) ----------->HVH21--------->MYB46(3) -ZAT6 --------->ANAC46   <---------LBD16 --------->HSFB2a(2) <---------ANAC58<---------RAP2.6(2)<--- -AtMYB61----------------->AGL1           --------->LBD16 <---------GLK1(1)  <---------LBD16    -----   ggattctccaagccggtataggtaaatggccggacacaattctccgagatctcgacctcgatttccttgacgctccttttccggccaccgggaaatcgga  26148900                           <---------ANAC58                           <---------ANAC58                           <---------YAB1                  --------->MYB52(1)                  ------>MYB83                  ------>MYB46(1)                 <---------ALFIN1                --------->MYB46(3)              --------->PCF2            --------->WRKY45            ----------->HVH21                        <-------GAMYB  ------>ZmHOX2a(1)            ---- ====================bZIP_DOF                       --------->MYB52(2)      <---------ANAC58  ------- ======bZIP_DOF <---------MYB55(2)                  <---------MYB46(3)      <---------ANAC58  <------ ----->TGA1a--------->WRKY12         <-----------RAV1(2)  ----------->RAV1(1)                <------- ------TGA1a--------->WRKY38(1)--------->ALFIN1    <-------TEIL <---------ARR11(3)         --------->YAB1 ---->SPL7<----------DOF2  <---------ANAC55(1)  <---------HSFB2a(1)--------->TOE2(3)      --------->ICU4   cgtcgagcgtttctttgacccaccgtattacgagtggtaccaggctaacaaggttcgttgcaacaaaatcctaaatttccttgaattcagtattgatcat  26149000                                                         --------->MYB59                                        --------->HSFB2a(2)                             <---------ANAC58 ------->HVH21         <---------TOE1(3)<---------HSFC1(1)<------MYB83                  <---------ANAC46 -->ATHB12           ---------->DOF2    <---------HSFB2a(2)               --------->ANAC46 ---ICU4       --------->YAB1      <-----------GT1     --------->CCA1(2)  --------->YAB1<---------ANAC58 --YAB1  --------->ZAT6<---------TOE2(3)--------->HSFC1(1)<------MYB46(1) --------->ANAC55(2)   tgacactgttaacactatcagagtaaaggttgttttttttctctagaaaacagagagatttggtctaagtttgtatacataatttgatttgtgtgtgtgt  26149100                                                       <------ZmHOX2a(1)                        <------ZmHOX2a(1)             <---------ZAT18                <------ZmHOX2a(1)                     --------->ZAT18         <----------DOF2              <---------TOE2(3)             <---------ANAC58                 <---------DAG2              <---------TOE1(3)             <---------ANAC46               ------->TEIL          <----------DOF2                   <---------ANAC58      ---------->DOF2   gtgtttgcaggggtttaaggaatataggaattttgaagagtgtttggcttatatagaggactacatgataaagaatggaccttttgatggtcttcttggt  26149200  Previous    Next  AGI:  At5g65400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24380.1); similar to unknown [Populus trichocarpa] (GB:ABK94545.1); contains InterPro domain Protein of unknown function DUF341 (InterPro:IPR005645) Range:  from: 26148652    to: 26150485    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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