Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->TOE1(3)                                                               --------->TOE2(3)                                                            <---------ARR14(2)                                                            <---------ARR11(3)                                                            --------->ARR14(2)                                                            --------->ARR11(3)                                                           <---------GLK1(1)                      ---                                                       --------->AHL20(2)                         ---                                                  ------------>CBF                                ---                                                --------->ANAC46                                 <---                  ------>ZmHOX2a(1)             --------->ANAC58                              -------         ------------>CBF                       --------->ANAC58       <---------YAB1    <---------AtLEC2    <---------ZAT18                            ------>ZmHOX2a(1)------>ZmHOX2a(1)    ----------------   gtctagagtacttcaatctccttcttaagccctctcgcctctaattctcctcgccaattgaatatccttaggcatgatagtgactctcttagcatgaatc  26137400                                                                           --------->HSFB2a(2)                                                                           <---------HSFB2a(2)                                                                       <---------ZAT14                                                                       --------->ZAT2                                                                       <---------ZAT2                                                                       --------->ZAT14                                                                     <------NtERF2                                                                     --------->ATERF1(1)                                                                    <---------At4g35610                                                                    --------->ABI4(2)                                                                   <---------DEAR3(1)                                                                  --------->ZAT18                                                                  --------->ATERF1(1)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2          ------>ZmHOX2a(2)                                                                 <---------ERF1         =============                                                                 <---------ORA47(2)    ==============                                                                 <---------DEAR4(2)    <------ZmHOX2a(2)                                                                 <---------RRTF1(1)   <---------AGP1                                                                 <---------RAP2.3(1)  --------->AGP1                                                                <---------RAP2.3(2)   <---------ARR11(3)                                                                --------->O2          <-----------ARR10                                                                <---------O2  --------->ARR14(2)        <------MYB46(1)                            --------->LBD16<------NtERF2       --------->ARR14(2)    --------->ATHB12                               ------>ZmHOX2a(1)------>NtERF2--------->ANAC58   --------->ICU4                            --------->At4g35610<---------RAP2.3(3)   <---------ARR14(2) ------>ANAC46                               <---------ATERF1(1)<---------DEAR3(1)    --------->ARR11(3) ------>ANAC58                              --------->RAP2.6(2) --------->DEAR3(1)   <---------CCA1(2) ------>ANAC58                            --------->At4g35610  --------->ATERF1(1)  ----------->ARR10 ------LBD16                            <-----------RAV1(2)   <---------ATERF1(1)--------->ANAC58   - >TEIL  <------MYB83                  <-----------HVH21 --------->ALFIN1  <---------LBD16        <--- ----->WRI1              --------->TOE1(2)<---------At4g35610----------->HVH21<---------ARR14(2) ----   gcgcaaagattggtgtcttcaaacaatccaacgaggtatgcttcagccgcttcctgaagtgctgcgacggcgctgctctggaaacgcagatctgttttga  26137500                                             =====================================HOX2a_HOX2a                                             <------ZmHOX2a(2)                                            <---------ARR14(2)                                            --------->ARR14(2)                                          --------->LBD16                  --------->MYB46(3)     <---------ANAC58                 ------->TEIL            <---------ANAC58              --------->ANAC58       <---------ANAC58              <---------MYB52(2)     <---------ANAC58          ------>ZmHOX2a(2)         <---------ZAT2         <------ZmHOX2a(2)          <---------HSFB2a(1)  ===============HOX2a_HOX2a        --------->ZAT2               <---------YAB1  ==============HOX2a_HOX2a         --------->HSFC1(2)         <---------At4g35610  ------>ZmHOX2a(1)  ------>MYB83   --------->HSFB2a(1)     <----------DOF2 ========HOX2a_HOX2a ------>MYB46(1)<---------HSFC1(2)    --------->ZAT14                  ---------- ========HOX2a_HOX2a --------->MYB52(1)  <---------ANAC46 <---------ZAT18       <-----------------AGL1 ---------->RAV1(2) --------->MYB55(1)  <---------LBD16   <---------ZAT14     --------->GLK1(1)     - ------GLK1(1)--------->ANAC58 --------->ANAC58    --------->At4g35610        <---------GLK1(1)    <- ----->GLK1(1)--------->ANAC46 --------->ANAC58  <---------GLK1(2)         ------>ZmHOX2a(1)       --   aatcctgagcgatctcacgaaccaaacgctggaacggaagcttgcggatcagaagctcagtgctcttctgatacttcctgatttctcttagggcaacagt  26137600                                                                    <---------ANAC46                                                               <-----------RAV1(1)                                           --------->ZAT2  <------NtERF2                                           --------->At4g35610 <---------MYB46(3)                                           <---------At4g35610 --------->MYB52(2)                                           <---------ZAT2 ------>NtERF2                                          --------->ARR14(2) <----------DOF2                                         <------NtERF2   --------->RAP2.6(2)                                        --------->LBD16  --------->RAP2.3(2)                                      <---------LBD16   --------->RAP2.3(1)             --------->ALFIN1         <------NtERF2     --------->DEAR4(2)        --------->GLK1(2)             --------->ATERF1(1)--------->RAP2.3(3)        --------->ARR14(2)          <---------ETT(2)    --------->ORA47(2)        <---------ARR14(2)          <---------DEAR3(1)  --------->ATERF1(1)       <---------GLK1(2)       <---------LBD16  --------->GLK1(1)   <---------ANAC58          <------    --------->ANAC58          ------>ZmHOX2a(1) <---------GLK1(1)   <---------ANAC58         ------>ZmHOX2a(1)    --------->ANAC58    <-----------GT1--------->DEAR3(1)--------->DEAR3(1)            <---------DAG2  <------ZmHOX2a(1)   <----------DOF2<---------ATERF1(1)--------->ERF1                 <----------DOF2 ->RAV1(1)   <-----------RAV1(1)    --------->ETT(2)   <---------ATERF1(1)            <---------ANAC58 -------->LBD16   <---------ANAC46 --------->SPL7     <---------DEAR3(1)              <---------ANAC58 --------HSFB2a(2)<---------ANAC58<---------MYB52(1)  --------->ANAC46         <---------ANAC58  <--- ------->HSFB2a(2)<---------ANAC58<-----------HVH21  ------>ZmHOX2a(1)         <---------ANAC58 -----   tccaggacggaatctgtgtggcttctttactcctccggtcgccggagctgatttcctcgccgcctttgttgcgagttgtttccttggggcttttcctccg  26137700                 <---------ANAC58                 <---------AtLEC2        --------->LBD16                 <---------ANAC46       --------->ANAC46      <---------ANAC58    --------->ANAC58      <---------ANAC58    --------->ANAC58  --------->HSFC1(2)            --------->CCA1(2)  --------->GLK1(1)    --------->SPL7<---------ARR14(2)                  <---------ARR14(2)  <---------GLK1(1)  <---------SPL7  --------->ARR14(2)                  --------->ARR14(2) --------->ARR14(2) <------MYB46(1) <---------GLK1(1)          <---------ANAC55(1) <---------ARR14(2) <------MYB83  <------MYB46(1)        <---------YAB1  --------->ARR11(3) ---LBD16 <---------ANAC46--------->ANAC46  <---------HSFC1(2) --------->ANAC55(2)              >>>>> ------MYB52(1)  <---------ANAC58 <------MYB83<----------DOF2  <---------ANAC55(2) --------->CCA1(2) ---->LBD16  <---------MYB52(1)<---------MYB52(1) <---------TOE2(3)      <---------ARR11(3)  >>>>>>>>   gtggatttccttgcggtttgcttggtacgagccatttggtatccgaagctttgagatttgtgattaagtgttgaagatttgtgagatttgatgaagaaga  26137800                                                                                     <---------AHL20(2)                                                                                   <----------DOF2                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                 <---------RVE1(1)                                                                                --------->ARR11(3)                                  <---------YAB1                                --------->AGP1                                 <-----------TBP                                <---------ARR11(3)                             <------MYB83                                       <---------AGP1                             <------MYB46(1)                                   <---------CCA1(2)                   <---------ARR14(2)                                         ----------->ARR10   <--  <---------ARR11(3)       <---------WOX13(1)                               <---------MYB52(1) ------  --------->ARR11(3)      <------------CBF      <---------ARR14(2)     <---------ANAC46   --------->AHL20(2) >>>>TBF1          --------->ARR14(2)           --------->ARR14(2)     <---------ANAC58   <---------AHL20(2) >TBF1 *TSS  ---------->DOF2<---------AtMYB61<---------ANAC46          <---------ANAC58  --------->AHL20(2)   agaagatgttgagactaaagggatactggattggtttttatagcgaagcgtatacaagggaagtatttgttttgcgtcgttagatcttttatttaatcaa  26137900                                      ---------->DOF2                                 ================bZIP_DOF                                 ================bZIP_DOF                                 ==============================MYC_MYB                                 --------->ANAC58                                 <---------ANAC55(2)                                 --------->TGA1a                                 <---------TGA1a                                 <---------O2                                 --------->ANAC58                                 --------->O2                                 <---------ANAC46                               <---------ALFIN1                             <-----------HVH21                             <-----------TGA1                            --------->bZIP60(2)            <---------AHL20(2)----------->HVH21                <----------DOF2     --------->At4g35610      <---------WOX13(1)    --------->O2                --------->MYB52(2)         <---------At4g35610     <------------CBF       --------->ANAC46          <--------P                 <-----------GT1   <---------YAB1          --------->LBD16        --------->YAB1     <---------ZAT18 -------MYB46(3)         <---------LBD16         <---------ATHB12    --------->ZAT18             ---- --->MYB52(1)            ------>ZmHOX2a(2)     --------->WOX13(1)  <---------At4g35610           <---   cggttgtgattgttttaattttagtgatccgcgtcacgtctaaagcagccaatcaggttagttttctttagcgcccaagttttttagcttccttcacaat  26138000                        <----------DOF2                      --------->ZAT14                    <------NtERF2<----------DOF2        <<<<<<<GRF7                   ------>NtERF2<---------DAG2         --------->MYB52(1)          <---------AHL20(2) <-----------GT1          ----------->HVH21         <---------AHL20(2) <-----------GT1         <---------At4g35610 ----->AHL20(2)   <---------ANAC58                  ----------->RAV1(2)                   <---------REM1(1) ------AHL20(2)   <---------ANAC58                  --------->At4g35610        ---------->DOF2   tttttagtttttttatttaggcgcgtcttttaaaccttttcgctaaattttggaacctgacagtgaaggcctctatgaaataaaagcccatgttgtagag  26138100                                   --------->ANAC58                                   --------->ANAC58                                --------->ZAT14--------->YAB1                       <---------ANAC46     --------->YAB1              --------->REM1(2)                       <---------ANAC58    <---------YAB1     <---------O2                       <---------ANAC58   --------->AHL20(2)  <---------TGA1a                  <-----------RAV1(1)    --------->YAB1       <---------bZIP60(2)                 <--                 --------->ARR11(3)--------->ANAC46           <-----------RAV1(1)                 ---            <---------MYB52(1)  <---------WRKY12              <---------REM1(1)                   ---           <-------GAMYB        <---------WRKY38(1)      <---------At4g35610                   ------          ----------->GT1       <---------ZAT18--------->TOE2(3)--------->ALFIN1        <---------HSFB2a(2)    ---------->DOF2  <---------ANAC46   --------->ICU4   --------->At4g35610    <---------ANAC55(2)   tctaggttaagcccgttaatatgttgtgtatcagtccacgaaattataatcttagtttctgctgatgtggcccatgtagaatacataagtcgagaaataa  26138200               --------->DOF5.7(2)             --------->ANAC58           ----------->GT1             --------->ANAC58   <-----------HVH21            <---------TOE1(2)  --------->ALFIN1           <---------ALFIN1  <---------ANAC58         --------->ANAC58    <---------ANAC58        --------------->AtSPL3--------->TOE1(2)   --------->ATHB12         <---------TOE2(3)  <---------YAB1       <--------HAHB4   <---------ZAT6 --------->ARR11(3)    --------->YAB1 ----------->GT1 <---------ARR11(3)   <---------YAB1 <---------AtMYB61                                             -- -------ICU4<---------TOE2(2)<---------ANAC46                <----------DOF2                    <---- ------>YAB1------->TEIL   <-----------GT1             <---------ATHB12        --------->ATHB12------ ------>AHL20(2) <---------DOF5.7(2) --------->ALFIN1--------->WOX13(1)   <-------TEIL         ------ --->YAB1--------->ANAC58<---------YAB1 <---------ANAC46--------->YAB1   --------->CCA1(2)  ---------   taatatcattgacgcacgttaactattattaacgtgtgagtggtgtaaaatcagccaatcaggctttaaatctagatacaaagattgagagttgagttag  26138300  Previous    Next  AGI:  At5g65360.1    Description:  histone H3. Identical to Histone H3.2 (HTR1) [Arabidopsis Thaliana] (GB:P59226); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10390.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10400.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT3G27360.1); similar to Histone H3.2 (GB:P68427); similar to histone H3 (H3-1.1) (GB:AAA32655.1); similar to histone 3 (GB:AAA33907.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H3; (InterPro:IPR000164) Range:  from: 26137085    to: 26137807    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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