Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------ANAC58       ------->GAMYB                                        <---------ANAC58    --------->MYB52(1)                                      <---------ANAC46  <---------ATHB12                                      ------->MYC3 --->GAMYB                                              <-------MYC3 --->ANAC58                                      --------->MYB46(3)                              ---- --->ANAC58              ---------->DOF2       <-----------GT1                  ----------->GT1<----- ->MYB46(3)      --------->AHL20(2)          <---------AHL20(2)          ----------->GT1 <---------YAB1   ccaaatcaacagagcaaaataaaacatgaaagagttgagtcaagaattttaacaaacacatggtgtgcatataagaagtaactcgaaaattttcattcac  26068900                                                  ---------->DOF2        ------>NtERF2                                               --------->LBD16           --------->LBD16                                               ------>NtERF2           <---------LBD16                                              --------->ANAC46      <---------GLK1(1)                                             <---------LBD16        --------->GLK1(1)                                          <---------HSFB2a(1)     <---------ZAT18                                          <---------HSFC1(2)      <---------ZAT14                                          --------->HSFB2a(1)     --------->ZAT14             -------                                        <---------GLK1(2)       --------->ANAC46           --------->TOE2(3)            <---------REM1(1) <-----------------AGL2       <---------ARR14(2)     <-----------GT1 ----->DEAR3(1)               <-----------------AGL3       --------->ARR14(2)     <<<<<<<<<GT-1 ----At5g28300                =======================================================================   cgagcacattggtgttgaaggtgtaatccatggctgaaattggaatctccgccaaaggtccgatacactgaactccggcgttattaaccaaaacatcaat  26069000                                            <---------ZAT2                                            <---------At4g35610                                            --------->At4g35610    ------>MYB46(1)                         <---------ZAT14                          <---------HSFB2a(1)    ------>MYB83                      --------->ANAC58                      --------->ARR11(3)  <---------MYB59             <---------DAG2--------->ZAT2                  <---------ARR11(3) ----------------->AG   --------->ANAC46    --------->ZAT14             ---------->DOF2 -->WOX13(1)         <---------ETT(2) --------->ANAC58         --------->ARR11(3)    --------->HSFB2a(1) ==================MADS_MADS  <----------DOF2                  <---------ARR11(3)  <---------GLK1(2)   ctgaccaaatttgtcgataactttcgacacaactttactcacgctctgctcagactgaacatcgagctcttgcacaaagaacttggaatctttctccaat  26069100                                                                         <---------WRKY18(1)                                       --------->MYB46(3)               ----------->HVH21                                    --------->ANAC46                   <-----------HVH21                                <---------ALFIN1                      <---------ANAC58                                --------->AtMYB61                     >>>>>>>>CAMTA3                               --------->bZIP60(2)                    <---------ANAC55(2)                               --------->ANAC46                       <---------ANAC58                               --------->MYB46(3)                     --------->ANAC55(2)                              ------>NtERF2                       ------>NtERF2                             <---------ALFIN1                    --------->DEAR3(1)                            --------->ATERF1(1)                  <---------ALFIN1                            <------NtERF2                       <------NtERF2                           ------>NtERF2                      --------->ANAC58                -------                           <---------ATERF1(1)                --------->ANAC58               --------                          --------->ANAC46                    --------->ANAC46               <-------                        <-----------HVH21 --------->MYB46(3)--------->TGA1a                 <--------                       <---------O2 --------->ANAC58        --------->ANAC58           --------->LBD16                       --------->O2 --------->ANAC58        <---------TGA1a        ------>ZmHOX2a(1)          --------->At4g35610--------->ANAC46<---------MYB52(1)------>NtERF2   <---------ARR14(2)          <---------At4g35610--------->DEAR3(1)             --------->ANAC58   --------->ARR14(2)  --------->YAB1 <------ZmHOX2a(2)--------->ANAC46          --------->ANAC46  <---------GLK1(2)   ---   tcagtcatcgtcttctgcgatcgactcgtcgccaccacacgacaaccattagccgagaactcacgcgccaacgcgtgaccgattcctccctgagaacatc  26069200                               --------->At4g35610                            --------->At4g35610                            --------->ZAT2                         <---------At4g35610                        <---------DEAR3(1)                      <-----------HVH21                     --------->O2                     --------->TGA1a                     <---------O2                                               --------->LBD16                     <---------TGA1a                  <---------AtLEC2     --------->GLK1(1)          <---------ALFIN1  <---------At4g35610  --------->ICU4--------->ARR11(3) -->ARR11(3)      <------NtERF2<---------At4g35610  <---------YAB1         <---------GLK1(1) ->HSFB2a(1)    <---------ANAC58              <---------AHL20(2)    ---------->DOF2 --HSFB2a(1)    <---------ANAC58         <---------AHL20(2)    <---------ARR11(3) -KAN4(2)--------->MYB46(3) <---------ZAT2    --------->AHL20(2)  <---------AHL20(2)              --- --->ZmHOX2a(1) <---------ANAC46        --------->AHL20(2)  *TSS--------->CCA1(2)               <----   ctgtgatgagaaccactggcgtctcgtcgctgctgcttcccattttatataattttgaatgaaaagatttaaaagagaaatccagaatataagggtcgaa  26069300                                                                                              -------                <---------HSFC1(2)                                                      --------->ANAC58                --------->HSFB2a(1)                                                     --------->ANAC58                --------->HSFC1(2)                                    <---------HSFB2a(2)  ----------    <---------ICU4                                                    --------->HSFB2a(2) <----------ID1   --------->ICU4       <---------REM1(2)                            --------->LBD16--------->ANAC46 -------->GT1   <---------HSFB2a(1)                                  <---------LBD16--------->ANAC58 --------CBF--------->DEAR3(1)     <---------TOE2(3)         <---------GLK1(1)      --------->ANAC58   ttgcaaaaattacgccgaagtttctcaacacagtattaagatgatgaagttttaaaattttagaattcttccccagaagtttgtccacgtatgcaacaaa  26069400                                                              --------->ANAC58                                                              --------->ANAC58                                  --------->ANAC46            --------->bZIP60(2)                                <-----------GT1               --------->ANAC46          --------->AHL20(2)    ----------->ARR10  <-----------GT1              <------NtERF2               <---------MYB46(3)<--  --------->LBD16     <-----------GT1              --------->LBD16           <---------MYB46(3)  ---- --->DOF2  ---------->ID1 <----------DOF2         --------->DEAR3(1)      --------->MYB52(1)     <--- ->RAV1(1)<------------------------ANAC81        <---------LBD16 --------->ATHB12   --------->AHL20(2)   gtccctgagatttgttttttttttttatctttttttactcaacagtgattcgccggagaagaccaagtcattgattcaacggttgataaaataaacagat  26069500                               --------->ANAC58             --------->ANAC58                               ------------------------>ANAC81            <---------AHL20(2) --------->ANAC58             --------->ANAC58        <---------AHL20(2)     ----------->GT1            --------->MYB52(1) -------AHL20(2)              ------------------------>ANAC81                                       - ----->AHL20(2)               --------->DAG2           <---------TOE2(3)                            - ------AHL20(2)              ---------->DOF2--------->MYB52(1)                          --------->WOX13(1)   taatttacatatatttacataaaacttcccaaaaagcaaaaaaaaaaaacagaaattaagaaacgaaattagctatgaacaaaatggaatcaagcagaga  26069600                                                                                                  ---                                                                                                 ----                   --------->ANAC58                                                       <---------At4g35610          --------->CCA1(2)                                                               --------->At4g35610 -------->ANAC58   --------->ANAC58                                          ---------->DOF2    <---- -------->ANAC58 ---------->DOF2                <<<<<<<<<TBF1   --------->YAB1       --------->YAB1<-   agaagccatgagagatggctaaagcaaactcagatttagcttcaaaattcttcttcaaactctcaatcttcatcttgtcaaaagctatagtcatcttcgc  26069700                                                    <---------SPL7                                                   <---------ANAC46                                                 <-----------HVH21                                               --------->MYB46(3)                                               --------->DEAR3(2)                                              ------>MYB46(1)                                             <---------ALFIN1                                            <---------MYB55(2)                                            <---------ABI4(2)                          --------->AtMYB61                                          --------->PCF2                             ------>NtERF2                             <---------------------WRI1                           --------->LBD16                            --------->LBD16--------->DEAR3(2)                     ------>NtERF2                 --------->YAB1       <---------HSFB2a(2)                        --------->ANAC58                 --------->AHL20(2)   --------->HSFB2a(2)                        --------->DEAR3(1)                <---------ATHB12     ------>ZmHOX2a(2)                           --------->ANAC58               ------>MYB46(1)       ===================================HOX2a_HOX2a --------->DEAR3(1)    --------->ARR11(3)     --------->ATERF1(2)------>MYB83                       --------->ANAC46    <---------ARR11(3)    --------->DEAR3(2)--------->MYB46(3)                  <---------LBD16 ------>LBD16  ------>MYB83--------->DEAR3(1)--------->MYB55(1)                ------>ZmHOX2a(1) ----->LBD16  --------->WOX13(1)   --------->ARR11(3)                          <---------ATERF1(1) -----LBD16  --------->MYB46(3)    <---------ARR11(3)            ------>ZmHOX2a(1)<---------ATERF1(1) -----NtERF2 --------->AtMYB61<---------DEAR3(1)--------->DEAR3(1)  ------>ZmHOX2a(1)----------->RAV1(1)   cggaattatcttccaccaatcaaattccaccggcgatgatctcgaacccaccgtcgtatgcttcatcctcctctcgtactcctccgccaccaaaatcgct  26069800  Previous    Next  AGI:  At5g65205.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G10050.1); similar to 117M18_6 [Brassica rapa] (GB:AAZ66925.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 26068036    to: 26069260    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g65207.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10040.1); similar to 80A08_3 [Brassica rapa subsp. pekinensis] (GB:AAZ67588.1) Range:  from: 26069471    to: 26069870    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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