Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->DEAR3(1)                                                  ----------->HVH21                                                 --------->ATERF1(1)                                        <---------ANAC58                                        --------->TGA1a                                        <---------ANAC58                                        <---------TGA1a   <------NtERF2                                        <---------ANAC46 <-----------HVH21                                      <------ZmHOX2a(1) --------->ALFIN1                                --------->At4g35610  <---------DEAR3(1)           ----------->HVH21    <------NtERF2    --------->ORA47(2) ------->LBD16                 <---------MYB46(3)<------NtERF2 ------->At5g28300            --------->ALFIN1   --------->DEAR3(2) --------RAP2.6(3)          <---------O2<---------O2<------NtERF2 -------ANAC46            <-----------RAV1(2)   <---------ATERF1(1)                        --------->MYB59 -------->GT1    --------->ALFIN1<---------ANAC46--------->RAP2.3(1)                       <---------TOE2(3) ->At4g35610  <---------DEAR3(1)<---------At4g35610------>NtERF2                           <---------TOE1(3) ---RAV1(1)--------->ETT(2) --------->At4g35610 ------>NtERF2                       <---------------- -MYB46(3) <---------ETT(2) --------->ZAT2     --------->DEAR3(1)          <---------MYB46(3)   ccgtaaaattctctcgacggtggagtaatcaggtggctgaggacgtgagacgccgacggtgtcgcaccaagtatcgattgttgatttcatgtttaggtta  26066800                                                                                                   --                                                                                                   --                                                                                                   --                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------                                       <---------MYB52(1)          ----------->RAV1(1)        <------                                     <---------MYB46(3)           ----------->HVH21     <-------MYC3                          --------->GLK1(2)                 <---------AtMYB61           ------->MYC3                     ----------->ARR10<-------GAMYB         <---------TOE2(3)           ------->MYC2                    <--------P      <------NtERF2     --------->DAG2                    <-------MYC2<             <---------GLK1(1)    <---------DEAR3(1) ---------->DOF2                   --------->ANAC58 -AG<-----------RAV1(1)  <---------GLK1(2)     <---------LBD16   <------NtERF2         --------->ANAC58   gggatgatgttggagaaatcgggtagagattcttcgtcgtcgttgagtttggggataaagttgaggtcgcgacagacttgaacacagacacgttcgaagg  26066900    --------->LBD16  <---------LBD16 --------->HVH21                                                        <-------GAMYB ------->WRKY38(1)                                                     <---------MYB46(3) ------->WRKY12                                                        --------->MYB111(2)       ---- --->HSFB2a(1)                                                        <--------P            <-------- ----HSFB2a(1)                                                       <-------GAMYB          <-------- ---TOE1(2)                                                         <---------MYB46(3)      <-------- ---TOE2(2)     ----------->RAV1(1)                              --------->LBD16       <-------GAMYB ---TOE1(3)    --------->MYB46(3)                              <---------LBD16  <-----------RAV1(1) ---------WRKY18(1)   <-----------HVH21            ----------->GT1 <---------AtMYB61  <-----------RAV1(1)   tttgaccggaagagacaacaacagggtcagacattactgattttgaaatcggacagagaaattcgaccggaggttgttgttcttgttgctgttgtcgtga  26067000                                                                 --------->At4g35610                                                                 <---------ZAT2                                   <------ZmHOX2a(1)--------->SPL7                               ---------->DOF2     <---------MYB52(1)                             ----------->HVH21    <---------RAP2.6(3)                            <---------ANAC46      <---------SPL7 --------->ZAT2                       <-----------RAV1(1)       --------->DEAR3(1)                       ===============================RAV   <-----------GT1       <-----------HVH21                      ------>ZmHOX2a(2)         --------->DEAR3(2)               ------->GAMYB                      ====================HOX2a_HOX2a      <-----------GT1    --------->MYB52(1)                     =====================HOX2a_HOX2a  <---------MYB52(1)   <---------ATHB12                     <------ZmHOX2a(2)          --------->ATERF1(1)  ----------->HVH21 ----->ICU4         <---------ARR11(3)          --------------->AtSPL3----------->RAV1(1) -ANAC58            --------->ARR11(3)    --------->At4g35610    <---------At4g35610           <----- -ANAC46            <---------ARR14(2)    ----------->RAV1(2)    =================RAV      <---------AtMYB61 -ANAC58            --------->ARR14(2)    <---------At4g35610    ----------->RAV1(2)   <------ZmHOX2a(1)   agatgaagaggttgaagaagacgatctgtggctgaaaggattccatctgagccgtccgtttttacccatctgcgacaaatcaacggtcaggaattggtgg  26067100                                                               --------->ANAC55(2)          <---------------AGL15                                <---------ANAC58         <-----------------AGL2                                <---------ANAC58       ---------->DOF2      <---------GLK1(1)    <----------DOF2  <---------TOE2(3)  <---------ANAC46 >>>>>>>>>TBF1 ----MYB46(3)---------->DOF2          <------ZmHOX2a(1)     <----------DOF2   *TSS >>>>>>>>>TBF1   tgagtttgatttctgaaaagggttttgggttttatggagaggaattagggatttgaattcatctttcgtgattttctgagaagaagaagaaagatgagaa  26067200                                   <----------DOF2                                             <-----                                <------ZmHOX2a(1)  <---------DAG2                             <------                       <---------ZAT14             <----------DOF2                            <------                      ------>ZmHOX2a(1)   <---------ANAC58              <---------AHL20(2)    -------                      --------->LBD16     <---------ANAC58       <----------DOF2           <---------AHL20(2)                    ----------->RAV1(2)<---------RAP2.6(2)      <---------ANAC58          --------->AHL20(2)                    =============================RAV   <XXXXXXXXXXXXXXXXXXXXXMIR855       <---------AHL20(2)  <------ZmHOX2a(1)------>ZmHOX2a(1) <-----------RAV1(1)        <---------ANAC58      <---------YAB1   gagaggagagtcgtcttcttcctcctgaactgaaggactttgtggcctactgactttttttttttggcttttgtttattttcgaagtgactattaatttt  26067300                                                                 <-----------RAV1(2)                                                              --------->PCF5                                                              --------->TCP16(1)                                                              --------->TCP11(2)                                                              --------->TCP20                                                    <---------YAB1                                                   --------->AHL20(2)                                                  <---------AHL20(2)                        --------- ----AHL20(2)                                     --------->AHL20(2)               --------->YAB1 ---AHL20(2)                                     --------->AHL20(2)             <----------DOF2 ---AHL20(1)                              ----------->GT1    <---------TCP16(2)<---------ANAC58 -->AHL20(2)                          --------->WRKY38(1)  --------->ALFIN1    <---------ANAC58   ttttttaaaaacttgaacatattagtagtaatcgaaaatgttgactgtgaaattaatataggtggacccagatgtgaattggctttcatagttcatgcat  26067400                                                                          <---------ANAC58                   <---------------AGL15                                  --------->ANAC55(2)                   --------------->AGL15                                  <---------ANAC55(2)                   <----------DOF2                                        <---------ANAC58                   ==================================================================================                  <-----------------AGL1                                 --------------->AtSPL3               <----------DOF2                                  <----------DOF2              <---------ANAC58                               --------->ARR11(3)              <---------ANAC58                               <---------ARR11(1)                     <        <---------AHL20(2)                                  <---------CCA1(2)------->TEIL          --  ---------->DOF2 <-----------------AGL2          --------->TOE2(3) <-----------GT1                <- >AtLEC2<---------YAB1                        <----------DOF2<---------ARR11(3)              --------   tctgaaaagttttattgctttctttttcaggtcaattttgttcatatacttttcttaaaaacatatcttttaacttacgtacttataaacttggaatgta  26067500   --------->YAB1  <---------YAB1                                                                                   <- <-----------GT1                                                                                ----- <-----------------AG                                                                           ----- ==================MADS_MADS                                                             --------->At4g35610 -----------GT1                              <---------ZAT14                     <---------AHL20(2)-- ------->AHL20(2)                            --------->ZAT14                     --------->AHL20(2)<- --------AHL20(2)                   <------ZmHOX2a(1)                <---------bZIP60(1) <---------At4g35610 --->GT1                        ---------->DOF2----------->GT1  <-----------RAV1(1)  <---------ICU4--   atttatcattttggaatgtaatctaatttgttttaaaaggatgacaatacagtgatacactgaaatatgtggcatcaataagtttaatttttgctgaata  26067600                --------->ZAT6          --------->ARR11(3)          <---------GLK1(2)        ----------->ARR10    --------->ATHB12    <---------ICU4    -------->HAHB4   <---------YAB1                            --------->TOE2(3)   --------->ICU4                     --------->ANAC58 --------AHL20(2)        <---------YAB1    --------->ICU4 ---->YAB1<---------ARR11(3)<---------WOX13(1) ------>GT1     <-----------GT1       --------->AtLEC2 ------->AHL20(1)      --------->YAB1 --------->ANAC46                           <---------At4g35610 --------AHL20(1)      <---------ICU4 --------->ANAC58   ----------->GT1         --------->At4g35610- ------->AHL20(2) --------->ANAC46 <-------TEIL    <----------DOF2 <----------DOF2        <----------DOF2   ataaaatgattagatttttcactaaacatgatggacatccatgccattcttagctttaggggaaaaaaacttttctcagttttagctgtaagctttacat  26067700  Previous    Next  AGI:  At5g65200.1    Description:  armadillo/beta-catenin repeat family protein / U-box domain-containing protein. similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G62560.1); similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G47820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64395.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadi Range:  from: 26065291    to: 26067178    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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