Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ----------->HVH21                 --------->At4g35610              <---------ATHB12            --------->WOX13(1)       --------->SPL7              <---------AHL20(2)      <---------MYB52(1)           --------->AHL20(2)   <---------------AtSPL3   --------->ANAC46  <---------DOF5.7(2)       --------->ANAC58                                                        < -->YAB1   <<<<<<<<<WRKY18  --------->ANAC58<----------ID1                                         <-   aagttatcgttcgtcaatgagttgacatctacgctaataaaacaataggccaaatgggcctagagacccaaacagctatttttctaacgtctatatttgt  26062200                                                                                            ---------                                                                                   ------->GAMYB                                                                                ----------->RAV1(1)                                                          ------>MYB83          --------->MYB52(1) --          <---------ZAT6             <---------MYB52(1)   ------>MYB46(1)      --------->ANAC46   <--   <-------GAMYB                 <---------At5g28300    --------->AtMYB61    --------->ANAC46   ----- ---------At5g28300             <-----------GT1   ----------->HVH21     <-----------GT1 ---------->DOF2 ----------GT1              --------->AHL20(2)  --------->At4g35610    --------->AHL20(2)--------->DAG2   tttaccgttgtagagttcgagtctcacagataaattaccgtttgtgaatgagttgacaccaacgtttgaaaaattaactacacaacagcaaaaagcgttt  26062300                        --------->ATHB12                     <-------GAMYB        --------------->AGL15    >>>>>>>>>GATA-1 <---------MYB46(3)    <---------------AGL15 -->GT1             --------->MYB52(2)   ----------------->AGL2 ------->YAB1     <---------MYB52(1)   --------->DEAR3(1) -------YAB1--------->DAG2    <------ZmHOX2a(1) ---->YAB1---------->DOF2   --------->MYB59   ataatagataaaaaaaggctgtttgttgattaggaacatcacagcccaatatagaagaaatacagaataagcccattgaatcaaattaaggcctaaaatc  26062400                                         <---------AHL20(2)                                     ----------->GT1                                  ---------->DOF2                              --------->YAB1                             --------->ICU4                                                        --                         --------->TOE2(3)                                                     ------              ---------->DOF2<---------YAB1  --------->AHL20(2)        ----------->GT1         <-----              <<<<<<<<<<<<WRKY18<---------YAB1<---------AHL20(2)     ---------->DOF2          -------    <---------YAB1      ----------->GT1 --------->AHL20(2)       ---------->DOF2       ------------>CBF   aatattcttcttggtcaaaagtcaaaacgttataatgaaagataaaatttaaaatcgaattagcgtcaaaagaaagttaatctttctcttacaatattta  26062500                                                                           --------->AHL20(2)           ----------->GT1                                                 <---------AHL20(2) --------->ANAC58                                                       --------->AHL20(2) --------->ANAC58                      <------------CBF      <------------CBF ------->YAB1                     ----------->GT1          --------->ARR11(3)                <------- --->AHL20(2)              ----------->GT1     ----------->GT1  ----------->GT1              -------- ----AHL20(2)             --------->ALFIN1    <------ZmHOX2a(2)----------->GT1         *TSS--------->DAG2 -->AHL20(2)     --------->AHL20(2)--------->YAB1      ---------->DOF2 --------->AHL20(2) ---------->DOF2   atcacgaacagaaatgtaaaaaaatcgagtgggaaaatgaaaattgagatcgataaaaaaagaaattggaaaaataaaaaaatgaagtaagaaaaaggag  26062600                                                                                              <------NtERF2                                                                                              ------>NtERF2                                                                                              -------                                                                                             --------                                                                                            <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           --------->ABI4(1)                                                                                           <---------ATERF1(1)                                                                                           <---------RAP2.3(1)                                                                                          --------->RAP2.6(2)                                                                                          --------->RRTF1(2)                                                                                          --------->DEAR3(1)                                                                                          --------->RAP2.3(2)                                                                                          <---------ALFIN1                                                                                          <---------DEAR3(1)                                                                                          <---------ATERF1(2)                                                                                          --------->ANAC46                                                                                          --------->RAP2.3(3)                                                                                          --------->RRTF1(3)                                                                                         --------->ORA47(2)                                                                                         --------->ERF1                                                                                         --------->RAP2.6(1)                                                                                         --------->RRTF1(1)                                                                                         --------->DEAR4(2)                                                                                         --------->RAP2.3(1)                                                                                         --------->ATERF1(1)                                                                                        --------->At4g35610                                                                        --------->At5g28300------>NtERF2                                                                        <---------SPL7  --------->ABI4(1)                                                                     --------->LBD16    ------>NtERF2                       ---------->DOF2                         --------->ANAC58         --------->LBD16                <---------MYB52(1)                             --------->ANAC58         <---------ATERF1(1)             <------NtERF2                                    ------->TEIL              <---------At4g35610           <---------DEAR3(1)                              <---------YAB1   --------->ICU4--------->ATERF1(2)          --------->SPL7                            <---------AtMYB61------>NtERF2     --------->DEAR3(1)  --------->MYB52(1)<------ZmHOX2a(1)    <----------DOF2 --------------------->WRI1    <---------ALFIN1 <---------AHL20(2)<----------ID1    --------->ANAC58<------MYB83 <---------ATERF1(1)<---------ATERF1(1) ---ID1   --------->ATERF1(1)        --------->ANAC58<------MYB46(1)--------->DEAR3(1) --------->ANAC46 --->GT1 <---------ATERF1(1) ---------->DOF2        --------->MYB59 <---------ALFIN1 ------>ZmHOX2a(1)   aaattaatggcagacggcgttaggacaaagaaaaagagaacgcctttctagggtttggtttatgaacgctccgccgtaagaattgtcctccgccgccgcg  26062700       <---------DEAR3(2)              --------->GLK1(2)    <-----------HVH21          <----------DOF2    --------->LBD16           <---------ANAC58     --------->ARR14(2)               <-----------GT1 -->LBD16                     <---------ANAC58     <---------ARR14(2)       <---------ANAC58 ->DEAR3(1)              --------->ATHB12          <---------ARR11(3)       <---------ANAC46 >DEAR4(2)               <---------ICU4<---------ARR14(2)                   <---------ANAC58 <------- >ATERF1(1)             <---------YAB1--------->WOX13(1)<---------MYB52(1)  <---------ANAC55(1) >RAP2.3(1)           <------ZmHOX2a(1)--------->ARR14(2)       <---------YAB1----------->GT1<-------   ttttcccgtcgattcagaacagaaggattattgcttttgccaatctgtatcaatatccgtttgattatccttgtaatttcgtgtaaaaaccattcaaggt  26062800                                                                            --------->ATHB12                                                                       --------->ARR11(3)                                                                     ----------->ARR10                                                                 <---------ZAT14  <---------GLK1(2)        ----------->ARR10<------MYB46(1)      --------->ZAT14 --------->At4g35610 <---------TOE1(3)      <------MYB83      <---------ANAC46  --------->YAB1 <---------At4g35610 <---------TOE2(3)    <--------P        <---------ZAT14<---------YAB1     <------ --TOE1(3)       <----------DOF2          --------->ALFIN1  --------->ZAT14--------->ICU4     ------- --TOE2(3) <---------TOE1(2)             <-------GAMYB     <---------MYB52(1) <---------WOX13(1)   ttcagcttcttccctcgttctttagggtttagatttgatttggggttgggatgagtagtccgttcagtgaagagatactgattgataacctcgctaagct  26062900                                      <---------YAB1                                    <---------ICU4                                    --------->YAB1          --------->MYB46(3)    --------->AHL20(2)     --------->ANAC58           <---------YAB1     --------->ANAC58           <---------AHL20(2)     --------->ANAC46        <----------DOF2  --------->ZAT14            ------>ZmHOX2a(1) ------->GAMYB           <---------ARR14(2)                  --------->AHL20(2) ---At4g35610            --------->ARR14(2)            --------->TOE2(3)               --------->At4g35610 -->At4g35610    --------->AtLEC2  <---------YAB1--------->ATHB12                      <---------At4g35610   caacagcactcaacaatccatccaaagtatcctttttattattattcgaattcattgcctcaattgaatacatctctgtgttttggattagctcattcac  26063000                                                                                     <---------WRKY18(1)                                                                                    ----------->HVH21                                                                                    --------->WRKY38(1)                                                                                    --------->WRKY12                                                                                  <---------ANAC58                                                                              <------MYB46(1)                 --------------->AtSPL8                                       <------MYB83                 <---------WOX13(1)                                          --------->MYB59               --------->ATHB12                                           --------->ATHB12              <---------YAB1                                            <---------WOX13(1)          --------->ATHB12                                            --------->ATHB12  <---------ANAC58                                 <----------DOF2   <---------YAB1------>ZmHOX2a(1)  <---------ANAC58   ------->TEIL                 <---------ANAC58   ------>ZmHOX2a(1)           <---  <---------ANAC46  <-----------GT1----------->GT1<---------ANAC58 --------->YAB1 <---------ANAC58   attggtgtgtcttcatttgattgaacctcttactgtatgcttaaatgtgtttgcttttgtatattgcaatcctgattgtttggtccttgaccatttgttt  26063100  Previous    Next  AGI:  At5g65180.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10060.1); similar to 4D11_9 [Brassica rapa subsp. pekinensis] (GB:AAZ67523.1); contains InterPro domain ENTH/VHS (InterPro:IPR008942); contains InterPro domain Protein of unknown function DUF618 (InterPro:IPR006903); contains InterPro domain Regulation of nuclear pre-mRNA protein (InterPro:IPR006569) Range:  from: 26062587    to: 26065257    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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