Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <-----------------AGL1                                                                        ----------------->AGL1                                                                        ----------------->AGL2                                                                       --------->TCP16(2)                                                                      <---------PCF5                                                                      <---------PCF2                                                                      <---------TCP16(1)                                                               <---------At5g28300                                                              <-----------GT1                                        <---------AHL20(2) --------->MYB52(2)                           ------>MYB46(1)                 >>>>>>>>>>AtMYB44           <------ZmHOX2a(2)                           ------>MYB83<---------AHL20(1)  --------->MYB46(2)         <---------ARR11(3)           --------->WOX13(1)          --------->AHL20(1)  --------->MYB59            --------->ARR11(3)          <---------WRKY38(1)          --------->AHL20(2)  --------->MYB111(1)    ---------->DOF2         --------->WRKY18(1)   ------>ZmHOX2a(1)         <---------MYB52(1)      =============HOX2a_HOX2a ------>TEIL-------->P   --------->AtMYB61              ------------>MYB.PH3(2)  <------ZmHOX2a(1) --   tgaacatgttagtcaaccagattaagaccaatcctatggaatataatcaacaatttttagttagttaccatgggaccacaagaggaaagatcaacgaaga  26052800                                  --------->GLK1(1)                                  <---------ARR14(2)                                          <------                                  --------->ARR14(2)                               <-------GAMYB                               >>>>>>>GRF7                                      <---------ANAC46                         <---------ANAC58                  ------>ZmHOX2a(1)    <---------ANAC58  ---                         <---------ANAC58      <---------ARR11(3)               <---------ANAC58  <--                      --------->MYB59          --------->ARR11(3)     <----------DOF2         <------ ------->ATHB12   <---------ZAT6 <------ZmHOX2a(1)    <---------GLK1(1)   <-----------RAV1(1) -------   aagattgaagaaatggtttagagttaggcttgtcaggattccatctataaatcttgaactccttcttaacttctttgtgttggcctgttgaaaatcagcg  26052900                                                              --------->YAB1                                                             --------------->AtSPL8                                                        <---------DAG2      ----------->GT1                         <---------AHL20(1) <---------AHL20(2)                           --------->AHL20(1) ---LBD16                                     <---------AHL20(2)                        <---------ANAC58 ------>ARR14(2)                   <---------AHL20(2)   <----------DOF2                 <---------ANAC46 -------ARR14(2)                ----------->GT1  <---------YAB1              <----------DOF2 ---At4g35610           ---------->DOF2       --------->AHL20(2)       <----------DOF2  <---------ANAC58 -->At4g35610        <----------DOF2         --------->AHL20(2) <---------CCA1(2) <---------MYB52(1)   gatataatttgaaaaaactgcttctttaaagaagtagttaattcaaattttattttagctttattcataccttctttctctttcgttatgtcttgggatt  26053000                                                            <---------ALFIN1                      ---                                                            --------->AtMYB61                     ---                                                         --------->ANAC46                        ----                                                    --------->GLK1(2)                           -----                                                    <---------ARR11(3)                         <-----                                                    <---------ARR14(2)                         ------                                                    --------->ARR14(2)                         ------     <---------YAB1                                 <-----------ARR10                         -------    <-----------ARR10                               --------->ARR11(3)                        -------    --------->GLK1(2)                          ----------->GT1                               <-------    --------->ARR11(3)                    <---------TOE1(3) --------->DEAR3(1)          <---------DAG2    <---------ARR11(3)      <---------DAG2<---------TOE2(3)<---------MYB55(2)           <----------DOF2    --------->ARR14(2)      <----------DOF2--------->ATHB12--------->MYB46(3)         ------->TEIL<--    <---------ARR14(2)   --------->RAP2.3(2)  ----------->GT1    <----------CDC5   --------->ANAC58   <---------ARR14(1)  <---------At4g35610<---------YAB1 <---------ALFIN1          --------->ANAC58   ttagagtatctttggataagtcttgagccgctttatgtccatttaagattggaaaatctccaccaccgcttaggctactgctcaaacgcactttctccgc  26053100                             --------->LBD16                          -------->P                         --------->MYB55(1)                         ------->GAMYB                        <---------MYB111(2)                        --------->MYB46(3)                        <---------MYB52(2)                        <---------MYB55(2) ------>At4g35610     ----------->RAV1(1) --->NtERF2        --------->RAP2.3(3) --------->ANAC46 ----->DEAR3(1) --------->DEAR3(1)     --------->ANAC58 ---->RAP2.3(1) --------->ANAC46       --------->ANAC58 ----ATERF1(1)  <---------ALFIN1--------->ANAC58 --->LBD16 --------->GLK1(2)--------->ANAC58 >NtERF2  --------->ARR14(2)--------->ANAC46                                                        < -->ANAC46<---------ARR14(2)--------->ANAC58                                --------->ALFIN1  ------- -->DEAR3(1) <-----------GT1------->GAMYB            *TSS      ---------->DOF2      <---------GLK1(1) --LBD16  <---------GLK1(2)--------->MYB46(3)       <---------ZAT18       <---------ANAC46--------->ARR14(2) -------At4g35610------>NtERF2  --------->ANAC58   <---------MYB52(1)   <---------ZAT14   <---------ARR14(2)   cgctggattacagattctccgccccaacaaccgcaagacagacgacattctctgttcgcttgatcaaaagctggtgaagtgtttggaattcgtttccgtc  26053200                                                                                                <----                                                                                                <----                                                                                     ------->MYC3                                                                                     <-------MYC2                                                                                     <-------PIF5                                                                                     ------->MYC2                                                     ------->PIF5                    ------->PIF4                                                     <-------PIF5                    <-------PIF4                                                     <-------MYC4                    ------->PIF5                                                     ------->MYC4                    <-------MYC3                                                     <-------MYC3                    ------->MYC4                                                     ------->MYC3                    <-------MYC4                                                     <-------MYC2                   --------->TGA1a                                                     ------->MYC2                   --------->O2<----                                       <---------AtLEC2                             <---------O2<----                                      <-------TEIL  <---------ANAC55(2)             <---------ANAC46                         <------ZmHOX2a(1)          <---------TGA1a                 <---------TGA1a                 --------->GLK1(2)  <-------MYC3    <---------O2                    <---------ANAC55(2)                 --------->ARR14(2) ------->MYC2    --------->O2                    --------->ANAC55(2)                 <---------ARR14(2) <-------MYC2    <---------ANAC46               ------------>OsbHLH66                --------->RVE1(1)   ------->MYC3    --------->TGA1a               <------------OsbHLH66            ---------->DOF2         ------->MYC4 ---------------->PIF3(2)   <---------WRKY38(1) ----- ---------ARR11(3)    <-----------RAV1(2)      ----------->HVH21       --------->ZAT14  --------->ALFIN1 -->LBD16   ==================================================bZIP_DOF <---------ZAT14--------->ALFIN1   aaaatccttggtgagaaagtatctgcaggagagagacatgtgcatggaaatgacacgtggacagcctagagcctgtagtcaatggcacgtgtgcgactac  26053300           --------->GLK1(2)           --------->ARR14(2)           <---------ARR14(2)          <---------CCA1(2)      --------->AtLEC2 <-----------GT1                                              --------->ZAT6                    <---- -----ANAC58                                          <---------AHL20(2)                   <---------ARR14(2) -----ANAC46                 ---------->DOF2          --------->AHL20(2)            <----------DOF2 -----ANAC58             --------->YAB1           --------->AHL20(2)            <---------TOE2(3)   - -----ANAC55(2)     <-------TEIL                  <---------AHL20(2)     --------------->AGL15  ----- ---->ANAC55(2)  <---------ZAT6                  --------->AHL20(2)     --------->TOE2(3) <------ZmHOX2a(1)   gtgttacaatgcaaatctagagttcattcattaaggcccatattaagcccatttaataaaactcccactagttttcttaatttaggctttgaggaccggg  26053400                         --------->PCF2                         <---------PCF2           <---------MYB46(3)           <---------DEAR3(2)          --------->ETT(1)     <----------DOF2        <-----------HVH21--------->PCF5   --------->ARR14(2)    --------->TCP16(1)   <---------ARR14(2) --------->ALFIN1                    <------ZmHOX2a(1) -----ARR14(2)       <-------MYC3                   <---------ANAC58 ----->ZmHOX2a(1)    ------->MYC3                   <---------ANAC46 ---->ARR14(2) ----------------->AGL1               <---------ANAC58         <---------MYB52(1)   tcctgtatcgggtcgggtccaaacgtggtccctctttaactcttaaaacctgtttcttgaggaatttgacaaataggtcgttttgttgtgaatttgtttg  26053500                                                                                         --------->GLK1(2)                                                                                =====================                                                                                ------->GAMYB                                                                               --------->MYB46(3)                                                                             <---------DOF5.7(2)                                                                       ==============================                                                                       ---------->DOF2  --------->YAB1                                                                    =================================                                      <---------YAB1                ------->GAMYB <------ZmHOX2a(2)                                 --------->At4g35610             ----------->RAV1(1)   <---------ATHB12                            ------>ZmHOX2a(2)             --------->ARR14(2)<---------WRKY45  =======                          <---------ARR14(2)              <---------ARR14(2)<---------WRKY38(1)                   <-------TEIL  <---------At4g35610      --------->ARR11(3)<---------WRKY12  -------   aaaaacagaagcattatcaaatgcattggatcgtgagcttcttataaacaaacccagacaaatcttgcaacagaaaagtcaacgatccaataatctgaaa  26053600             <---------ANAC58             <---------ANAC46             <---------ANAC58         -------->ABF1         <-------MYC4         <-------PIF5         <-------MYC2         ------->PIF5         ------->MYC2         ------->MYC3         <-------MYC3        --------->O2        >>>>>>>>>>ABI5        ========================bZIP_DOF        ========================bZIP_DOF        --------->ANAC55(2)        >>>>>>>>>>HY5        <---------TGA1a        --------->TGA1a        >>>>>>>>>>AtMYC2        <---------ANAC55(2)        <---------bZIP60(2)        <---------O2                         <---------WRKY18(1)       >>>>>>>>>>>>AtMYC2                    >>>>>>>>>>WRKY62    ----------------->PIF3(1)                >>>>>>>>>>WRKY40   ----------->HVH21                         >>>>>>>>>>WRKY18  ----------------------->TaNAC69(2)        --------->WRKY38(1) ----------->GT1                            --------->WRKY12 --------->At4g35610                        --------->WRKY45 <---------At4g35610                        ----------->HVH21 =================MYC_MYB                 <----------DOF2 =================bZIP_DOF         <------ZmHOX2a(1) =================MYC_MYB          <---------PCF5              ------>ZmHOX2a(1) =================bZIP_DOF --------->HSFB2a(2)     <---------ATHB12 --->DOF2------->MYC4<----------DOF2  <---------ALFIN1  --------->ANAC46           <----------DOF2   gagaggtgacacgtggcatgtctctttgtctggagcaggaccacctttgaccaataacacacatccttcttcgttgaaaaatactctttttgttgaatgc  26053700  Previous    Next  AGI:  At5g65165.1    Description:  SDH2-3 (Succinate dehydrogenase 2-3). Identical to Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial precursor (SDH2-3) [Arabidopsis Thaliana] (GB:Q9FJP9;GB:Q9G3L8); similar to SDH2-2 (succinate dehydrogenase 2-2) [Arabidopsis thaliana] (TAIR:AT5G40650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43582.1); contains InterPro domain 2Fe-2S ferredoxin, iron-sulphur binding site; (InterPro:IPR006058); contains InterPro domain 4Fe-4S ferredoxin, iron-sulphur binding; (InterPro:IPR001450); contains InterPro domain Alpha-helical ferredoxin; (InterPro:IPR009051); contains InterPro domain Beta-grasp fold, fer Range:  from: 26051648    to: 26053153    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g65166.1    Description:  unknown protein Range:  from: 26053517    to: 26053720    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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