Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->ANAC46                                                        <---------ARR11(3)                                                        --------->ARR11(3)                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                       --------->GLK1(1)                                                   --------->LBD16                                                 <---------LBD16                                                --------->MYB52(1)                                <--                                              <---------ZAT14                                     <--                                              <---------At4g35610                                ----                                            --------->REM1(1)                                 <------                             --------->MYB52(1)<---------ALFIN1      --------->ANAC46      --------->At4g35610 --------RAV1(1)     --------->ICU4    --------->ANAC46--------->KAN4(1)               --------->YAB1 -->ARR14(2)    --------->ANAC58   --------->CCA1(2)  ---------->TaMYB80             <---------YAB1 < ---ARR14(2)    --------->ANAC46  --------->ARR14(2)  <---------KAN4(2)            --------------->AGL15 --CCA1(2)      --------->ANAC58  <---------ARR14(2) <---------GLK1(2)             <---------------AGL15   tgttggaaaaaatcaaacaagtcattagttccaacggatataggctacagcaccggaatatccacaattccacataaactattgactattaatagctgca  26047200                                                 --------->AHL20(1)                                                 --------->AHL20(2)    --------->YAB1                               <---------AHL20(2)   <---------YAB1                          --------->TOE2(3) --------->ATHB51                  --------->TOE2(3) ------HAHB4                     --------->ARR11(3)      <---------ICU4          <------ZmHOX2a(1) -------ICU4           <---------AHL20(2)--------->ARR11(3)                 --------->YAB1--------->AHL20(1) ----->ICU4            --------->AHL20(2)<---------ARR11(3)               --------->ANAC58<---------AHL20(1) -TEIL          --------->ANAC58 <---------ARR11(3) <---------YAB1        --------->ANAC58<---------AHL20(2) ---------YAB1  --------->ANAC58<---------CCA1(2)<---------AHL20(1)  --------->ZAT18      --------->AHL20(2)   ttattattgtaatctctcaagacaaaaaattagtatatcttaaaatcttattttattaatcttcgcctaagcgaacaagcataggactacaataaatttc  26047300                                                                                            ------>ZmHOX2a(1)                                                                                         ============                                                                                         ============                                                                                         <------ZmHOX2a(2)                                                                                   <---------LBD16                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                                <---------At4g35610                                                                                --------->At4g35610                                                                                --------->ZAT2                                                                                <---------ZAT2 ------                                                                               ----------->ARR10                                                                             --------->At5g28300                                                                          <---------LBD16============                                                                         <---------O2------>NtERF2<--                                                                         --------->O2--------->LBD16-                                              ---------->DOF2  ---------->DOF2<--------P ============                         <---------AHL20(2)<---------------AGL15      ----------->HVH21 <---------ARR14(2)                        --------->AHL20(2) --------------->AGL15     <-----------HVH21  --------->ARR14(2)   aaagttttcaacattcttcgatttcataaaatttggctctactaactaaaaagagtcatttcagacaaagaggtcacgcggtagctccgcgatcctcctc  26047400                                                                                            <--------          ------>ZmHOX2a(1)                                                               --------->AHL20(1)       ------>ZmHOX2a(1)                                                                  --------->AHL20(2)      <---------ALFIN1                                                                    <---------AHL20(1)    ------>ZmHOX2a(1)                                                          --------->ZAT14 ================HOX2a_HOX2a                                                   --------->ARR14(2) =HOX2a_HOX2a        ------------>CBF                                          <---------ARR14(2) >ZmHOX2a(1)  <---------ALFIN1                                --------->ARR14(2)          <---------AHL20(2) =============HOX2a_HOX2a         --------->ZAT6              <---------ARR14(2)         <---------AHL20(2) ---------HVH21  --------->DEAR3(1)               --------->AtLEC2             <---------ZAT14     -- -------->ARR14(2)<-----------HVH21             <---------ANAC58      ------>MYB46(1)    --------->AHL20(2) ==========HOX2a_HOX2a          -------->P      <---------ANAC58      ------>MYB83   ----------->TBP<   cgtctcctcctcctcaacaccgtcgcaatcgctctaccagtaagtcacttccttgcaaaatgcaaatacacctacaaaccgtatactacaaataaattgc  26047500                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                  --------->RAP2.6(3)                                                                                  --------->SPL7                                                                                  --------->SPL1(2)                                                                                <---------MYB52(1)                                                                                <---------SPL7                                                                              <---------------AtSPL3         --------->YAB1                 --------->YAB1                   --------->ANAC46         -------->HAHB4                 <---------ICU4         <XXXXXXXXXXXXXXXXXXXXMIR416       <---------TOE2(3)               <---------ATHB12    <---------ZAT14   <------------------SPL14      --------->YAB1                   --------->ICU4    --------->REM1(2)  --------->MYB52(1)   <----------DOF2          <---------AHL20(2)        <---------ANAC46   --------->ANAC58           <   --------->TOE2(3)    <---------AHL20(2)            <---------ANAC58   --------->ANAC58           - ----CBF<---------YAB1  --------->AHL20(2)            <---------ANAC58--------->TOE2(2)          <--- ------->REM1(1) ----------->GT1   ------------>CBF  <-------TEIL     --------->TOE1(2)     <-------- ---------ARR11(3)     --------->AHL20(2)    <----------ID1<---------REM1(2)------->TEIL   ----------   gacatctttaatgataagaatgttatttaattagttggacaatgatgaagacaagtgcgtgttcacggtttacatacgaaccggtacggcatggaaagcc  26047600                                                                              ----------->GT1                                                    <---------MYB52(1)        <------MYB46(1)                                          <---------WRKY38(1)       <-----------HVH21                                   --------->ARR14(2)            <---------ANAC58          <---------MYB52(1)       <---------ARR14(2)            <---------ANAC58         <-----------TGA1         <-------GAMYB    <-------GAMYB <------MYB83 <------MYB83 -------TEIL      --------->DEAR3(1)     --------->WRKY18(1)     <------MYB46(1) -------->ZAT14  --------->ATERF1(1) <---------At5g28300     <---------ARR14(2) ------DEAR3(2) ------->TEIL  ------------>AtMYB77 --------->At5g28300       <---------AtMYB61 -GLK1(1)<-----------HVH21   --------->ANAC46   <---------LBD16 <---------AtMYB61         <-------TEIL >DOF2  --------->ANAC46 <----------DOF2<-----------HVH21    --------->ARR14(2)         <---------PCF2   ggtacagactccgtcatgagcctccgtctttacgacagttacggtcaagacgcggttatctccgatttggtgtcatggggaggtttaatgggtccatttc  26047700                                                 <---------ANAC58                                                 <---------ANAC58                                             <---------ANAC58       --------->ZAT18                                             <---------ANAC58       <---------ZAT14                                            <-------TEIL   <---------LBD16                                           --------->ARR11(3) <---------MYB52(1)                                        <---------TOE2(3)  <-------TEIL                             <           --------->ALFIN1             --------->MYB59  <---------ARR14(2)                         -        --------->HSFB2a(2)             <---------TOE1(3)--------->ARR14(2)------->TEIL<---------MYB52(1)        <---------HSFB2a(2)        <---------MYB46(3)  <---------TOE1(2)<---------ATHB12     <-------   atgactatttcgagaggggcaatctcgacattttcagtggtttaggttcttgcctctcaggtccggtttgtgcaatgaatttgacatccgatggctctgg  26047800                        <---------ANAC58                        <---------ANAC46                        <---------bZIP60(2)           <------MYB46(1)           <------MYB83 <---------ANAC55(1)          <---------MYB46(3)          --------->MYB46(2)          --------->MYB111(2)          --------->MYB111(1)          <---------AtMYB61         <---------MYB55(1)                           <------NtERF2         <--------P     <---------ANAC58           --------->ATERF1(1)        <-------GAMYB   --------->ANAC55(2)        <------NtERF2                                  <-- --------->YAB1         <---------ANAC55(2)       <-----------HVH21                               <-- <---------ICU4        <-----------------------TaNAC69(2)                                         <-- ---------YAB1    <---------YAB1       --------->ATHB12                            --------->ALFIN1 -------->ICU4  --------->YAB1        <---------YAB1<---------DEAR3(1)<------ZmHOX2a(1)       <------ ----RAV1(2)    ----------->GT1 ----------->HVH21--------->DEAR3(1)<-----------RAV1(2)        <------   tgatcatcacggttggtattgtaattacgtggaagtgaccatgagtgagagccgtcggagaagttgttcacaggagaagtttgaagtggagcaatggctg  26047900                                            <---------ANAC58                                            <---------ANAC58                                            <---------ANAC46             <---------MYB52(1)     <---------YAB1                    --------->ATHB12                ----------->GT1 -------ANAC46                        <---------ATHB12       <---------ARR14(2) -------ANAC58                        <---------YAB1         --------->ARR14(2)                     < -------ANAC58      --------->At4g35610-------->ATHB1        --------->GLK1(2)            <---------ZAT6 ---ANAC58          <---------At4g35610<---------ICU4       <---------GLK1(2)        <---------REM1(1) ---ANAC58    <---------SPL7          --------->ICU4   --------->WRKY18(1)        <---------ATHB12---   gctcgtgatgcttcaccgtatgagctgtaggcgattagaaatcattgctcggacttggtcaagaatcggcgagtcgttattcccatgatgtagtgggaga  26048000                               --------->ATHB12                              <---------YAB1                        <---------ANAC58                        --------->ANAC55(2)                       --------->YAB1                   --                        <---------ANAC55(2)                      <---------YAB1                   <--                        <---------ANAC55(1)                    <---------ICU4            <---------ICU4                        <---------ANAC58                 --------->HSFC1(1)              --------->ATHB12                   <---------ICU4           ---------->ID1     --------->YAB1            --------->YAB1       <-----------HVH21<---------ANAC46    <---------TOE2(3) --------->ICU4            <---------YAB1 ---------YAB1    --------->ICU4       --------->GLK1(2) --------->HSFB2a(2)            --------->ICU4 ------>AHL20(2)  <---------YAB1 <---------WOX13(1)      <---------HSFB2a(2)  --------->MYB52(1) <---   ttatttatgtgtcaaatgtcatgtttacgtgtgtgattgagaatttgtggtttttttttctcgaataatgaaaatgaaaacaactgtgttatcattgtat  26048100  Previous    Next  AGI:  At5g65158.1    Description:  similar to lipid-associated family protein [Arabidopsis thaliana] (TAIR:AT2G22170.1); similar to unknown [Populus trichocarpa] (GB:ABK93810.1); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); contains InterPro domain Lipoxygenase, LH2 (InterPro:IPR001024) Range:  from: 26047616    to: 26047930    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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