Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->ARR11(3)                        --------->AHL20(1)                        <---------AHL20(1)                        <---------ARR11(3)              --------->ANAC46            ----------->RAV1(1)            ------->GAMYB            --------->TOE2(3)                                      --------->YAB1           --------->MYB46(3)                   -------->P  --------->ANAC58                       -- ----DOF2 -------->P   --------->YAB1--------->ZAT6         --------->ANAC58              <---------ALFIN1 --DAG2 --------->MYB46(3)  <-----------GT1  <---------MYB52(2)    --------->TOE2(3)      --------->ZAT6   tccatcaagaacaaccacaaaacaaaaatatttcaatttagactactactaacctgtattgaacgcccatcttaatcccaagggacatatcaacacttcc  26029300                                       ----------->RAV1(1)                                     --------->At4g35610           <---------WOX13(1)       --------->ANAC46         <---------ICU4           --------->At4g35610         --------->ATHB12       --------->YAB1        <---------YAB1         <------ZmHOX2a(2)                 <---------GLK1(2)        --------->ICU4        <---------ARR11(3)          -------->P        --------->ANAC58     ------------>ATHB5       --------->ARR11(3)        <---------SPL7      --------->ANAC58     ---- --------->ZAT2               --------->ARR14(2) --------->MYB52(1)  --------->HSFB2a(2)    <-------TEIL --------->At4g35610         <------ZmHOX2a(1)--------->TOE2(3) <---------At4g35610   --------->At4g35610 <---------At4g35610       <---------TOE1(2)  --------->TOE1(3) --------->ZAT2        <---------At4g35610 ------->MYB46(3)         <---------LBD16     <---------MYB59   <---------ZAT2     ---------->DOF2  -   aacagcttccatgattgcgaaatacttctcaggatcatcagcaacatacctaaacggccttaccccagcttctctaacaagccctataagctgattcata  26029400                                     --------->ATERF1(1)                                     <------NtERF2                                    <---------ATERF1(1)                                    <---------SPL7                                    ------>NtERF2                                   <---------ANAC46                                ------>ZmHOX2a(2)                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                        --------->ARR14(3)                        --------->ARR11(3)           <------NtERF2                        --------->ARR14(2)          <---------HSFB2a(2)                        <---------ARR14(3)          --------->HSFB2a(2)           --------->ARR11(3)   <---------DEAR3(1) <---------ANAC46           <---------ARR11(3) <---------ARR14(2)   --------->ETT(1)          --------->YAB1<---------ARR14(2)        --------->ALFIN1      --------->LBD16  <---------GLK1(1)    --------->GLK1(2)     <---------HSFB2a(2)<---------ARR11(3)  --------->ARR14(2) --------->DAG2         --------->ARR11(3) ----->ANAC46  <---------YAB1 --------->ARR14(2) <-----------HVH21 ----------->GT1    <---------ARR11(3) -------------->ANT    --------->GLK1(1)    <---------ARR14(2)---------->DOF2        <---------CCA1(2)   cacaattcccgatgatcatccttggagatctcgatcggcgtctgcaaatcgggtcgggaattgaaaaagtcgaaaattttctcttgtatatctatatgtt  26029500                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                -----                                                                                            ------>NtERF2                                                                                            <--------                                                                                           ----------                                                                                           --------->DEAR3(1)                                                                                          <----------                                                                                          --------->ATERF1(1)                                                                                          <------NtERF2                                                                                         <---------RAP2.3(1)                                                                        <---------ZAT14  ------>NtERF2                                                                        --------->At4g35610<---------DEAR3(1)                                                                        --------->ZAT18  <---------ATERF1(1)                                                             --------->ANAC58           <---------DEAR3(1)                                                             --------->ANAC46        --------->MYB46(3)                                                             --------->ANAC58      <---------DOF5.7(2)                                                             <---------O2     ------>MYB46(1)   <----                              ----------->HVH21              --------->O2    --------->MYB52(1)------                              --------->WRKY12               <---------TGA1a--------->DEAR3(1) <-----                              --------->WRKY38(1)            --------->ANAC55(2) --------->At5g28300                             <---------MYB52(1)              <---------ANAC55(2) --------->DOF5.7(2)                            ===========================================MYC_MYB------>MYB83--------->RAP2.3(1)                    --------->HSFC1(2)                       ===========================MYC_MYB<-----                 ---------->DOF2        <---------GLK1(2)    --------->TGA1a--------->AtMYB61 -------              ----------->RAV1(1)      <---------At4g35610   --------->ANAC55(1)------->GAMYB--------             <----------ID1 <-------GAMYB                  <---------ALFIN1 --------->MYB46(3)<------ ------>ZmHOX2a(1)  <---------HSFC1(2) <---------ZAT2  --------->DEAR3(1)  --------->MYB46(3)<------NtERF2   ttcctctcatatacagcgacaaagcttcgccgttgacatccagcttcttcgacctcgccgaacacgtctccgtctgcaccaacggtaacgacggcgacgg  26029600                                              <------NtERF2                                              ------>NtERF2                                             --------->RRTF1(2)                                             --------->DEAR3(1)                                             --------->RAP2.3(2)                                             --------->RRTF1(3) -----NtERF2                                 --------->RAP2.6(2) ---------HVH21                              --------->ANAC46 --->NtERF2                               <---------DEAR3(1) ------ANAC46                           <---------ALFIN1 ---->RAP2.3(1)                       ------>NtERF2                              <---------ARR14(2) -ATERF1(1)                         ------>ZmHOX2a(2)                        <---------At4g35610 ->HVH21                            --------->ATERF1(1)                    <---------WRKY12 -----------WRI1                   <------ZmHOX2a(2)                      <---------MYB52(1) --NtERF2                         <---------ARR14(2)                     <-----------HVH21     ------ >NtERF2                    <---------MYB46(3)--------->LBD16            <-----------TGA1      <----- ----ATERF1(1)     ---------->DOF2--------->ARR14(2)                    --------->ANAC46       ------ ----RAP2.3(1)<------MYB46(1)   ----------->ARR10                     ------>ZmHOX2a(1)       ------- -->DEAR3(1)  ----------->GT1   <---------MYB46(3)            <---------GLK1(2)  <---------GLK1(2) ->ATERF1(1)  <------MYB83  --------->ATHB12--------->RAP2.3(1)    ------>ZmHOX2a(1)       --------->ANAC46 ---DEAR3(1)--------->CCA1(2)  <---------TOE1(2)             --------->At4g35610 --------->ARR14(2)--   cgtcaaggagggagataggtgtaaagacaatcgttggatccgcctcgccgcaattagcccatcagattcctcctccgtcatcggattcttctctcgccgc  26029700                                                                                              -------                                                                                              -------                                                                                              =======                                                                                              <------                                                                                              -------                                                                                              -------                                                                                      <---------O2<--                                                                                      <---------bZIP60(2)                                                                                      ===============                                                                                      <---------ANAC46                                                                                      <---------ANAC58                                                                                      <---------TGA1a                                                                                      <---------ANAC58                                                                                      --------->O2===                                                                                     ----------->STF1                                                                                    <---------TGA2(2)                                                                                   ----------->HVH21                                                                                   ----------->TGA1                                                                                 --------------------                                                                                 --------->At4g35610                                                                            --------->ANAC58  =======                                                        <---------TOE2(3)   --------->ANAC58  -------                                                      ===============================================                                             --------->YAB1            --------->ANAC46 --------->ALFIN1                                         <---------AHL20(2)       ==============================bZIP_DOF                                        *TSS<---------YAB1        <----------DOF2<---------At4g35610 >NtERF2                           <---------TOE2(3)  ==========================================bZIP_DOF -NtERF2       ----------->GT1    <---------DOF5.7(2) ---------->DOF2 --------->RAP2.6(3)     ------- --->LBD16<---------ATHB12        --------->MYB52(1) <---------YAB1   <---------At5g28300     <------ -->DEAR3(1) --------->At4g35610--------->DOF5.7(2)--------->YAB1 =================================== ------->GLK1(2)       <-----------GT1 ------->TEIL--------->AHL20(2) <---------LBD16----------->bZIP911(1)   gattccatttcaatgagttgaaaattttctcttcgctaacgaatttatgaaaattataaaggtgaatgcttttacggcaaggaagatgacgtggacacgt  26029800         <---------ANAC46         <---------ANAC55(2)         <---------ANAC55(1)         <---------ANAC58         <---------ANAC58         <---------O2         --------->O2      ----------->HVH21    --------->WOX13(1)  ------------>CBF -->bZIP60(2) -->TGA1a<---------TGA1a ==================bZIP_bZIP ---TGA1a<---------bZIP60(2) -->ANAC58 -->ANAC58 -----GAMYB                                                                                  <------- =====MYC_MYB                                                                      <-----------HVH21 ==================MYC_MYB                                                  <----------DOF2  -------- --->TaNAC69(2)  --------->CCA1(2)                     <----------DOF2     ========================== =====MYC_MYB   --------->ARR11(3)                 <---------ZAT18         --------------->AGL15 -->O2<---------ATHB12                            <---------ANAC46        ----------------->AGL1   <- ===bZIP_DOF    <---------ARR11(3)                <---------ANAC58  ------>ZmHOX2a(2)        <------- -->ANAC46 --------->ALFIN1                       <---------ANAC58<---------ARR11(3)       ---------- ---O2----------->TGA1                 ---------->ID1  <---------DAG2  <----------DOF2 --------->At4g35610 ===bZIP_DOF--------->REM1(2)  ------------>CBF<-----------RAV1(1)--------->ARR11(3)   <---------At4g35610   cgttgtcaatgacgtgtagatatataagtggataacaatttggctctatctggtgtgcttttcgaggtgatctctttcctttttttgtcagataagattt  26029900                                                 --------------->AGL15                                                 ------>ZmHOX2a(1)                                                 <---------------AGL15                                                ----------------->AGL3                                                <---------MYB59                       <----------DOF2      <----------DOF2                      ==================================HOX2a_HOX2a                      ------>ZmHOX2a(2)  ------>MYB46(1)             <----------DOF2          --------->ANAC46               ------>MYB83           --------->ALFIN1 --ARR11(3)         <---------ARR11(3) <---------MYB59        <-----------RAV1(1)      <-----------RAV1(1) ->ARR11(3)         --------->ARR11(3) --------->MYB46(3)--------->ANAC55(2)          <------------AtMYB77 ================================================================MADS_MADS          ------->TEIL ----------GT1   <---------WOX13(1)   --------->ANAC58  <---------TOE1(3)        --------->ANAC55(2) --GLK1(2)--------->ANAC58            --------->ANAC58  <---------TOE2(3)    <---------DAG2      <--- ->ARR10  --------->ANAC58          <-----------GT1     --------->MYB59      <----------DOF2     ----   ttgaccagacataagccagattgatcttttccatcttgttacccaactttcctaattttaggtaatgtgggcttttgggctttatgtaactgtgggtttt  26030000                                             --------->LBD16                                    <----                                      ----------->HVH21                                         -----                                     <-----------HVH21                    ---------->DOF2 ------>ZmHOX2a(2)                                    --------->TGA1a                   <-----------HVH21   ===========                                    <---------TGA1a                 --------->LBD16      <------ZmHOX2a(2)              <---------ANAC55(2)   <---------ANAC58              <---------LBD16        ============              ----------->GT1       ======================================bZIP_DOF      <---------ARR14(2)       ----------------->AGL1       <---------ANAC58       *TSS---------->DOF2   --------->ARR11(3)  <-----------RAV1(1)               ======================================bZIP_DOF      --------->ARR14(2) ------AHL20(2)                ------>ZmHOX2a(1)         <---------ARR14(2)      --------->GLK1(2) ----->AHL20(2) --------->AHL20(2)<---------ANAC46       --------->ARR14(2)      <---------ARR11(3)--   taatttgtggcccattaagtaaatctaagagtcctcgcgcgtgactcccgagtccgacgaattcgaaacgcgggtcaaaagaaaatctaagatcggagaa  26030100            --------->ANAC46           <---------LBD16                                                                      <----   <---------ARR14(2)                                                                           <----   --------->ARR14(2)                                                                       <--------  <------ZmHOX2a(1)                                 <---------ANAC46                        <-------- -----GLK1(1)                        --------->TOE1(3)          <---------ANAC58         <---------CCA1(2) ---->GLK1(1)------>NtERF2 --------->HSFB2a(2)   <---------MYB52(1)               <---------GLK1(1) ========HOX2a_HOX2a <---------ALFIN1--------->TOE2(3)    <---------AHL20(2)      --------->GLK1(1) ========HOX2a_HOX2a--------->MYB46(3)          <-------GAMYB   <---------ANAC58 <---------ARR11(3) ------->YAB1--------->LBD16  --------->YAB1   <-----------RAV1(1)               --------->ARR11(3)   atcaggatttgttcccgcctcaaccacttctaaaataaaccctaattctctgttgagtatatttttgcttccgattaaaccaagatttctcatttcttgc  26030200  Previous    Next  AGI:  At5g65110.1    Description:  ACX2 (ACYL-COA OXIDASE 2); acyl-CoA oxidase. Identical to Acyl-coenzyme A oxidase 2, peroxisomal precursor (ACX2) [Arabidopsis Thaliana] (GB:O65201;GB:Q9FJQ4); similar to ACX6 (ACYL-COA OXIDASE 6), acyl-CoA oxidase [Arabidopsis thaliana] (TAIR:AT1G06310.1); similar to ACX3 (ACYL-COA OXIDASE 3), acyl-CoA oxidase [Arabidopsis thaliana] (TAIR:AT1G06290.1); similar to Acyl-coenzyme A oxidase, peroxisomal precursor (AOX) (Long-chain acyl-CoA oxidase) (GB:O64894); similar to acyl-CoA oxidase [Petroselinum crispum] (GB:AAF14635.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49894.1); contains InterPro domain Acyl-CoA oxidase/dehydro Range:  from: 26026861    to: 26029740    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g65120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10110.1); similar to 52O08_25 [Brassica rapa subsp. pekinensis] (GB:AAZ67571.1) Range:  from: 26030059    to: 26031866    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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