Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <               --------->YAB1                                                                   <----     --------->At4g35610                                                                      -------   <-----------RAV1(2)     ---------->CDC5                                                    <------ ------TEIL    --------->ATHB12         <---------AtMYB61                                     ------- ---AHL20(2)   <---------ICU4<---------At4g35610                                              <------ -->AHL20(2)  <---------ATHB12     <---------ATHB12                 <---------ICU4            ------- ->YAB1       --------->ICU4 --------->At4g35610   ---------->DOF2 <---------YAB1             <------   atgcatcagaagaaaaatcattacatggctcagcccaatgttttggtttctcatacagcccaatacatgctcattactagtattgctacagcccaatata  26014300                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---          --------->ICU4                                                                         <---        <---------ICU4                                                                          ----- ---------YAB1                                                                               -------- -----GLK1(2)                                                                              --------->ZAT2 -->AHL20(2)                                       ------>ZmHOX2a(1)                       --------->At4g35610 ---AHL20(2)                               --------->YAB1                                  <---------ZAT2 -->AHL20(1)                              <---------ATHB12                            <---------ANAC58 ---AHL20(1)                              --------->MYB46(3)                          <---------ANAC58 -->ARR11(3)                             --------->ANAC46                          <---------ATHB12<- ---ARR11(3)                            --------->WOX13(1)                   <------NtERF2 <---------At4g35610   ttctcattagtcattactagtatcggtggaatgaactaaatccaatcaacgtccttgagttgtttgagtttgagttggcagagcaatgacttgagctggg  26014400  --------->At4g35610  <------MYB83  <------MYB46(1) --------->MYB55(2) <---------MYB46(3) ---------MYB55(1) ---------ANAC46 ------GAMYB --------ZAT2 ------->ATERF1(1) ------->At4g35610 -----NtERF2 -------RAP2.3(1)                                                       <---------ARR14(2) -------MYB46(3)                                                    <-------TEIL -------DEAR3(2)                                                   --------->ARR14(1) --->NtERF2                                                        --------->CCA1(2) -------ATERF1(1)                                                  --------->GLK1(2) ------ATERF1(2)                                                  --------->ARR11(1) ------DEAR3(1)                                   <---------At4g35610   --------->ARR14(2) ------RAP2.3(3)                             --------->O2         <---------ARR14(2) ------RAP2.3(2)                             ========================bZIP_DOF--------->ANAC55(2) ------RAP2.6(2)                             --------->TGA1a      <---------GLK1(2)               <-- ---->RAP2.6(3)                            <---------ALFIN1       --------->ARR14(2)   <---------YAB1 ->ALFIN1        <------ZmHOX2a(1)    <---------ARR14(2)  ------>ZmHOX2a(1)<-----------GT1        <-- --------At4g35610                    --------->ARR14(2)  <----------DOF2--------->GLK1(1)        <--   cggctggtgaatgtgccaaggacacattagtacaaatccaaatccccacttcggctaatccttttagagattcggatttacatgatgttgttataggttt  26014500                                                                                                    <         <---------ATHB12                                    <---------CCA1(1)                     --         --------->ICU4                                      <---------RVE1(1)                   <---    <---------ANAC55(2)                                     <---------ARR11(3)                   ----    --------->ANAC46                                        --------->ARR11(3)                   ----    --------->ANAC58                                 --------->MYB52(1)                         -----    --------->ANAC55(2)                           <---------ANAC55(2)                           -----    --------->ANAC58                       <---------------AGL15      ---------->DOF2           ----- -------TOE1(3)         <----------DOF2    --------------->AGL15 <---------AHL20(2)         --------- -------TOE2(3)       ---------->ID1       <----------DOF2  <---------ARR14(2)        >>>>>>>>>>GT-3b -------YAB1         <-----------GT1     ---------->ID1   ----------->ARR10        ----------->GT1<--   aagattacgcaatgagttttttttttctttttctcactgttttgtctttattcagtaacgaagatattttaaaaaagacacagagaagaaaaataaacgc  26014600        --------->GLK1(1)    --------->LBD16  <-----------RAV1(2) -----------HVH21 ------->RAP2.3(3) ------ZAT18              --------->ANAC55(2) ----->ZAT18              <---------ANAC55(2) -->NtERF2                <---------ANAC58           <---------MYB52(1) ---->ANAC46              <---------ANAC58       ------->TEIL ---->ANAC58       --------->TOE2(3)           <---------ABI4(2) ---->ANAC58      ----------->GT1             --------->ANAC58                                    --- ->DOF2 <---------GLK1(1) <---------ANAC55(1) --------->ANAC46                  <---------TOE2(3) <-- ----NtERF2  <---------At4g35610              --------->ANAC58         <---------AtLEC2           <--   gccctcagggaattcagcatgcgttaatacgtgtctagatttgattaaacgcaccgtttagttttttttttttgcaagtcttaatgtttttttgtttgtt  26014700               <---------WOX13(1)              <------------CBF             --------->ATHB12            <-------TEIL   <---------AHL20(2)   --------->AHL20(2)  <---------AHL20(2)          *TSS                   <---------AHL20(2)  --------->YAB1   <---------------AGL15             <---------ATHB51  --------->AHL20(2)          <------------CBF       --------->AHL20(2) ------>AHL20(2)   --------------->AGL15            --------->AHL20(2)--------->HSFB2a(2) -------YAB1<---------YAB1   --------->ATHB12 --------->AtLEC2     <---------YAB1 ----------->GT1   - -------AHL20(2) --------->YAB1  <---------LBD16    <---------AHL20(1)<---------HSFB2a(2)---------->DOF2   ttaattaaaatatgttcattgatatttttagtaattggggattaagtcatacaaaataattcatggattgtgctagaaaacaactggaaaaaaaagaaga  26014800                           ------>NtERF2                          <---------ETT(1)                          --------->DEAR3(1)                          ----------->HVH21                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                      --------->GLK1(1)                      <---------GLK1(1)                     <---------ARR11(3)                     <---------ARR14(2)                     --------->ARR11(3)                     --------->ARR14(2)                     <-----------ARR10                     <---------ARR14(3)                     --------->ARR14(3)                    <------ZmHOX2a(1)            <---------ATHB51            --------->AHL20(2)                                                           --------->ANAC58            <---------AHL20(2)                                                           --------->ANAC58           <---------AHL20(1)                                                 <---------ANAC46           --------->AHL20(2)  ----------->GT1                                --------->ETT(1) <---------AHL20(2) <---------GLK1(2)                                       <-----------HVH21 -------->YAB1   <---------LBD16                                           --------->ALFIN1   aataaaaatgcaaaataattcaggatctccgaccagtttatacagacatcagaattgaagaaattaggggattagatgtgtcggaagagtgaagccatgg  26014900                                                        --------->HSFB2a(2)                                                        <---------HSFB2a(2)                                                    <---------DAG2                                              --------->ANAC58                                              --------->bZIP60(2)                                              --------->ANAC58   --------->ANAC58                                              --------->ANAC46   --------->ANAC58                                         <---------ETT(2)      --------->CCA1(2)            <--------               <------ZmHOX2a(2)       --------->At4g35610    <----------ID1              <---------- >>>>>>>>>TBF1<---------ARR11(3) ---------->DOF2    <----------DOF2                ---------->DOF2   gaagaagaagagtagagatcaaacgaattgagaacaaaagcagtagacaagtcactttctgtaagagacgaaatggtctcatggagaaagctcgtcaact  26015000                                                                         <-----------HVH21                                                                         ----------->RAV1(1)                                                                         ------>NtERF2                                                                        <---------ETT(2)                                                                        --------->DEAR3(1)                                                                        --------->ETT(2)                          <----------DOF2                               ----------->HVH21                   <-----------HVH21                     --------->REM1(1)<------NtERF2                  --------->ANAC46            --------->LBD16          --------->RAP2.3(1)                ------>ZmHOX2a(1)            --------->ATERF1(2)      --------->LBD16              ------>ZmHOX2a(2)              <---------ATERF1(2)      ------>NtERF2             <------ZmHOX2a(2)               --------->DREB2C(2)      <---------ATERF1(1)           <            --------->ARR14(2)               --------->DEAR3(1)      <---------DEAR3(1)           ---            --------->ARR11(3)              <---------LBD16         <---------LBD16         <-------- -WRKY12    <---------ARR14(2)            <---------ALFIN1      ------>ZmHOX2a(1)          <--------- -HVH21     <---------ARR11(3)     <---------CCA1(2)--------->ZAT6 ------>ZmHOX2a(1)   <----------DOF2   ctcaattctctgtggatcctccgtcgctcttttcatcgtctcttccaccggcaaactctacaactcctcctccggcgacaggtctcactctttttaactc  26015100                                                                         <---------HSFB2a(1)                                                                         --------->HSFB2a(1)                                                                         <---------HSFC1(2)                                                                         --------->HSFC1(2)                                                                        <-----------ARR10             <----------DOF2                                            <---------ARR14(2)           <---------------AGL15                                        <---------ARR11(1)          -           --------------->AGL15                                        ------->TEIL               <-        --------->GLK1(2)                                               --------->ARR14(2)        >>>       <---------ARR14(2)                                              <---------ARR14(1)         >>> ----------DOF2                                                 ------>NtERF2                   <---- --->ZmHOX2a(1)                                               ---------->ID1                    <---- ---GT1<---------GLK1(2)           --------->LBD16          <-----------GT1      <---------ZAT6 <---- --GT1 --------->ARR14(2)         --------->ANAC46<---------TOE2(3)    <---------CCA1(2)     --------   ctctttgtagattctctttttagttcatcatcttctccgaaacttagaaactagggttttttttgcccccttcgaatcttcttgtgttagccaaatttaa  26015200  Previous    Next  AGI:  At5g65080.1    Description:  AGL68/MAF5 (MADS AFFECTING FLOWERING 5); transcription factor. similar to MAF4 (MADS AFFECTING FLOWERING 4), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65070.1); similar to 80C09_26 [Brassica rapa subsp. pekinensis] (GB:AAZ41837.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 26014730    to: 26019691    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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