Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <------MYB46(1)      <---------DEAR3(2)      <------MYB83      <---------MYB46(3)     <---------DEAR3(1)    <---------ORA47(1)   <-------GAMYB  <---------SPL7  <---------MYB46(3)  <------MYB46(1)  <---------DEAR3(2)  <------MYB83 <---------MYB46(3)              -------->P <---------DEAR3(1)              --------->MYB52(1)                                            ------ <---------AtMYB61             <---------SPL7                                              --------->YAB1 --------->MYB59               <----------DOF2                                            <---------ATHB12 ----------HVH21              <---------ANAC58        --------->MYB46(3)           --------->LBD16 ---->AGL15                   <---------ANAC58    <-----------HVH21              ------>ZmHOX2a(2) -----AGL15             --------->MYB52(1) <----------DOF2--------->TOE2(3)      <---------LBD16 ------AGL2          --------->YAB1      <---------YAB1   --------->YAB1       --------->ARR14(2) ----->AGL3         <---------ATHB12    <---------ARR11(3)--------->TOE1(3)    <---------ARR14(2) ------AGL3       --------->WOX13(1)  <---------MYB52(1)  --------->AtMYB61  ----------->ARR10 ------   gggtcggtcggtttagagtccaatcaaaacgggcttaccggttatctttcagggtcacaaccataacccaaataaaccgatgatccggacaaatgataag  26009100                                      <-----------GT1                              <---------RVE1(1)                              <---------CCA1(1)                             <---------AHL20(1)                                                <-----                             --------->AHL20(1)                                                <-----          ----------->HVH21  --------->ARR11(3)    ---------->DOF2                             ------   <---------ZAT2   --------->At4g35610          --------->ANAC58                              <-----   <---------At4g35610       <---------ARR11(3)  --------->ANAC46                              <-----   --------->At4g35610   ---------->DOF2         <---------ANAC55(2)                           <-----   --------->ZAT2   <---------At4g35610          --------->ANAC58                  --------->ARR11(3) --->ANAC58         <---------ZAT2--------->AHL20(2)                         <---------MYB46(3)<----- --->ANAC58         --------->ZAT2<---------AHL20(2)                         <-----------RAV1(1)   tcacgagctgaaatgacgactcagctcgaaagatatttatttacgagcatcacgaaagtagaacatttgtcgaatcgatttgttggatattgatattacg  26009200                                                         ----------->RAV1(1)                                                        <------NtERF2          --------->ANAC46                             ----------->RAV1(1)          --------->REM1(1)                            ------>NtERF2    <---------ARR11(3)        --------->MYB52(1)      --------->ANAC46              <---------ANAC58 ----ANAC55(1)              --------->MYB46(3)        --------->ANAC58              <---------ANAC58 ----bZIP60(2)            <-----------GT1            ------->GAMYB                  <---------ANAC55(1) --->ANAC55(2)            <<<<<<<<<GT-1            ------>MYB46(1)                  --------->ANAC55(2) ----ANAC58          <---------YAB1        ---------->DOF2                   --------->TOE2(3) ----ANAC58       <---------YAB1 ----------->GT1 --------->AtMYB61          ----------->GT1 ----ANAC46       <---------AHL20(2)    --------->YAB1--------->ANAC58     <-------TEIL           --- ----ANAC55(2)   --------->AHL20(2)  --------->YAB1------>MYB83   --------->GLK1(1) <---------ANAC55(2)   tggaactatcttacaccatttttattattaaccaagggataataacaaagaccaacgcgccacaagggaactcgacatgcgttaatacgtgtctaaactc  26009300              <---------MYB52(1)          ------->TEIL        <---------ABI4(2)                                                                          <-       --------->ANAC46                                                                            <-       --------->ANAC58                                            ------>ZmHOX2a(1)            <----       --------->ANAC58          ---------->ID1              <----------DOF2                   <----- --------->AHL20(2)    <----------DOF2 <---------AtMYB61  <-----------GT1               ------------>CBF --->ZmHOX2a(1)--------->REM1(2) <---------TOE2(3)   --------->GLK1(2)      <-----------GT1  --------   ctattaaaaacgcaccgtttagactctttgagtttgtggttttggtttaagcgagaattttttcttttcctctcttattaacaaaacaaaaacaatttta  26009400                                                                       ------>NtERF2                                                                       --------->LBD16 --------DAG2                    <---------AHL20(2)                   <---------DEAR3(1) ---------DOF2                   --------->AHL20(2)                  <---------LBD16 -------GT1               ----------->GT1                     <---------ANAC58                 ------ ------GT1           --------->AHL20(2)                       <---------ANAC58                 ------ ->YAB1  --------->ICU4 ---------->DOF2  ---------->DOF2    <-------TEIL              *TSS    <<<<<<<   acttttttgaaatttttagcaaaataaaaagaaaattaaaaaaaaaagacacaaaaaaaacgttcagtgtctccggcgagttatgcagacatcacaatca  26009500       --------->At4g35610     <-----------RAV1(2)   <-----------HVH21                                                                       <---------  <------MYB83                                                                       --------->ANAC58  <------MYB46(1)                                                                    ----------->GT1 --------->MYB59                                      <------ZmHOX2a(2)              --------->ANAC58 --->AHL20(2)                                --------->DAG2                     <---------ETT(2) --->YAB1           <------NtERF2           ---------->DOF2                 --------->ARR11(3) <<ARR2<---------At4g35610              >>>>>>>>>TBF1<---------ARR11(3) ---------->DOF2 <-----------GT1   aattaggtcagaagaattagtcggagaaaacagccatgggaagaagaaaagtagagatcaaacgaattgagaacaaaagctctcgacaagttactttctg  26009600                                                                                     --------->LBD16                                                                                   <---------LBD16                                                                                  ------>NtERF2                                                          <-----------HVH21      <---------ALFIN1                                                         --------->ANAC46      <-----------HVH21                                                       ------>ZmHOX2a(1)       ------>NtERF2                               <---------WRKY12    <---------ARR14(2)   <---------ICU4             <- <----------ID1              <-----------HVH21     --------->ARR14(2)--------->YAB1<------NtERF2  <-- -DOF2                ---------->DOF2       <----------DOF2         <---------YAB1--------->MYB52(1)   taaacgacgaaatggtctcatggagaaagctcgtcaactctcaattctttgtgaatcctccgtcgctcttatcatcatctctgccaccggaagactctac  26009700                --------->ANAC55(2)                <------MYB46(1)                <---------ANAC55(2)                ----------->GT1                                         <------ZmHOX2a(1)               --------->MYB59                                     <---------HSFB2a(2)           ----------->HVH21                                       --------->HSFB2a(2)         --------->At4g35610                                --------->ARR11(3)         <---------At4g35610      --------->AHL20(2)        <---------ARR11(3)       <-----------RAV1(2)    <---------MYB59  <----------DOF2 <----------DOF2      ------>ZmHOX2a(1)      <---------ANAC55(2)          <---------AHL20(2)                  <------ --------GLK1(2)<------MYB83 --------->ANAC55(2)         --------->AHL20(2)               <XXXXXXXXXX -------At4g35610    --------->ZAT6<---------AHL20(2)    <---------AHL20(2)              --------->AGP1   agcttctcctcaggtgataggtaacaccattacctattttatagtttctcttttgttaattaaatctttctcgaggaacatataaactacagaactaggg  26009800                <---------CCA1(2)                                                               <----       <-----------GT1                                                                         ------       <---------At5g28300         <---------ANAC58         <---------ANAC46          --------->AHL20(2)      <-----------GT1     <---------At4g35610            --------->ICU4           <---------YAB1<----   <----------DOF2        --------->At4g35610       --------->ANAC58              <---------TOE2(3) ---TOE2(3) <----------DOF2        <---------ANAC46 --------->ANAC46              <---------TOE1(3) XXXXXXXXXXMIR852------->TEIL      <---------ANAC58 --------->ANAC58           --------->AHL20(2) <--   tttttcttttacccctttgaatctttgaagctgattttcgtgttttgttcatccaagtaatgatgtataggtttacccaaatttaagattaaacaatgtg  26009900                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                           --------->AHL20(2)          --------->LBD16                                             --------->ANAC58     <---------   ---------->DOF2                                                    --------->ANAC58  --------->ARR11(3) -----ANAC58                               --------->YAB1           <---------AtLEC2    <---------ARR11(3) --->ALFIN1                               <---------YAB1       --------->MYB52(2)      <---------CCA1(2) -----ANAC58  <---------ARR11(3)        <-----------GT1        <---------MYB46(3)    ------>ZmHOX2a(1) -------ANAC46--------->ARR11(3) <---------ANAC46              <-----------RAV1(1)<-----------GT1   gtgtccaaagtccagagatgttcttggtgtttgttttgtgttttatcatattctattgttttcatttgttgcaaggatttaattttcctatatctttttt  26010000  Previous    Next  AGI:  At5g65070.1    Description:  MAF4 (MADS AFFECTING FLOWERING 4); transcription factor. similar to AGL68/MAF5 (MADS AFFECTING FLOWERING 5), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65080.1); similar to 80C09_26 [Brassica rapa subsp. pekinensis] (GB:AAZ41837.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 26009486    to: 26013360    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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