Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                         --------->YAB1                              --------->YAB1                                       --------->YAB1                              <---------ICU4            <---------TOE2(3)       --------->RVE1(1) ---ICU4            <---------TOE1(3)              <---------ANAC46     <---------AHL20(2)   <------- -->YAB1            <---------TOE2(3)            <---------ZAT14        --------->AHL20(2)  --------- --YAB1           ---------->DOF2        --------->LBD16<---------TOE1(3)   --------->AHL20(2)     <-   ggctactcgcataagtttagtaaaggtttgaataatggccatccgtataagtttagtgaaggtttgaatactaatttataaaatatcagaattataaaat  25999100                                                                        --------->LBD16                                                                    --------->SPL7                                                                    <---------ARR14(2)                                                  --------->ARR11(3)------->TEIL                                                 --------->GLK1(1)<---------SPL7       <-----------GT1                     --------->MYB52(1)    ------->GAMYB ->AHL20(2)                             <---------ICU4         <---------At5g28300 --AHL20(2)                             --------->YAB1        --------->MYB52(1)              <------ >AHL20(2)                       --------->TOE2(3)<---------ARR11(3)--------->ARR14(2)        <------ --------ANAC55(2)     ---------->DOF2 --------->AHL20(2)     <-----------GT1           --------->ZAT6   tacatgaattatccagccctctcttaaaagtttatcgtcaaataataactgaaatctttaaaattaaccgtacccgagtcatattcactagcactacttt  25999200                                                                                  <------NtERF2                                                                                 --------->LBD16                                                                                 ------>NtERF2                                                                                --------->ATERF1(2)                                                                                --------->RAP2.3(2)                                                                                <---------ATERF1(2)                                                                                --------->RAP2.6(2)                                                                                --------->DEAR3(1)                                                                                --------->RAP2.3(3)                                                                                --------->RRTF1(2)                                                                                --------->DREB2C(2)                                                                               --------->RAP2.3(1)                                                                               <---------LBD16                                                                               --------->ATERF1(1)                                                                               --------->ERF1                                                                              <---------ATERF1(1)                                                                              --------->MYB52(1)                                                                             ------->GAMYB                                                                             --------->DEAR3(1)                                                                            --------->DEAR3(2)                        --------->TOE1(3)                                   --------->MYB46(3)           --------->ANAC46                                         <---------ARR11(3)        --------->ARR14(2)                                          --------->ARR11(3)       --------       <---------CCA1(2)--------->TOE2(3)                           --------->GLK1(2)       --------- ----DOF2 ----------------->AGL1                                   --------->RVE1(1)        --------- ---DAG2<---------ARR14(2)                                       --------->AHL20(2)       --------->MYB46(3)   tcgatatttgtatccgaaatggataaccttaacttaagtttttaataccaaaacatatggaacaaaaaaaaatctaaaaccgccggcaaaaaacaaccaa  25999300                 <---------YAB1               --------->YAB1          <------NtERF2                                                                          <---      <------MYB83--------->ATHB12                                                               <---      <---------ANAC58                                                                      <--------      <---------ANAC58                                                                      <--------      <---------ANAC46----------->HVH21                                          <---------AHL20(2)      <------MYB46(1) <---------SPL7         <---------AHL20(2)                  --------->AHL20(1)     --------->MYB46(2)                     --------->AHL20(2)                   --------->AHL20(2)     <---------DEAR3(1)              ------>MYB83                               --------->AHL20(2)     <---------MYB46(3)              ------>MYB46(1)                        <---------YAB1------->TEIL     --------->MYB55(2)            ------->GAMYB                        ----------->GT1<---------ANAC58   <---------MYB52(1)------>ZmHOX2a(2)      <---------AHL20(2)         <---------ZAT6  <---------ANAC58 ->MYB46(3)   --------->ICU4      --------->DEAR3(2)                   ----------->GT1--------------- >ANAC58 <---------MYB46(3)       --------->MYB46(3)             ------->GAMYB  <---------AHL20(2) -- >ANAC58--------->ALFIN1        --------->MYB52(1)      --------->TOE2(3)  --------->AHL20(2)<-------   tttctgttcggtggggatgatgatcggaccggtctaaccgactgaattaaatgtcaattcttaacaacgacgagtgttaaaattaaattatgtgcctttt  25999400 <---------DEAR3(2)                 <---------AHL20(2) ------ANAC58                     <---------YAB1 ------ANAC58      --------->ARR14(2)                                             ---------->ID1 --DOF2            <---------ARR14(2)   <-----------GT1                         *TSS -DAG2    --------->ANAC58       <---------AHL20(1)                     <---------ANAC46 >AtSPL8  --------->ANAC58       <---------AHL20(2)                     <---------ANAC58 -------->ID1--------->MYB52(1)<---------YAB1                           <---------ANAC58 ---DOF2  --------->ANAC46  <---------YAB1         <-----------GT1--------->MYB52(1)   cgtcgcttcaaaacgcaaccgtttccacttcttattattttttttctctcgtttaacaaaacaaaaacaaactgacttggatttgtcattttttgtctag  25999500                                                                                                    <                                                                                                    =                                                                                              -------                                                                                            ---------                                                                                            <--------                                                                  --------->ANAC58        <---------MYB52(1)                                                                  --------->ANAC58       --------->LBD16                                                             ---------->DOF2           <---------LBD16               --------->DAG2                        ----------->GT1                <---------GLK1(1)              ---------->DOF2               ------------------------>ANAC81        <---------PCF2 <--   ccaaaaaaaaaaaaaaaaaaggagagagagagagagagagagagagagagaaacgaagaaaaaaaaagaagcaaaaaacattgtgggtctccggtgatta  25999600                  <---------DAG2                  --------->TOE2(3)                ------>MYB83              <---------ALFIN1              --------->MYB46(3)             --------->ATERF1(1)             <------NtERF2                                            <---------HSFB2a(2)       <----             --------->At4g35610                                   <---------ARR14(2)     --------->ANAC58 ------ZmHOX2a(2) <----------DOF2                           ---------->DOF2               --------->ANAC46 ==================================HOX2a_HOX2a             <------ZmHOX2a(2)              --------->ANAC58 -->ICU4     <---------At4g35610           ----------->GT1--------->ARR11(3)              --------->bZIP60(2) >ATHB12  --------->ZAT18        --------->ANAC58         <---------ARR11(3) ---------->DOF2    <---- -MYB46(3)<---------ZAT18   <------ZmHOX2a(1)     --------->DAG2   --------->ARR14(2)<---------ETT(2) ----ZmHOX2a(1) ------>MYB46(1)  --------->ANAC58---------->DOF2   --------->GLK1(2) --------->ETT(2)   ggatcaaattagggcaccagccttatcggaggaagaagccatgggtagaaaaaaagtcgagatcaagcgaatcgagaacaaaagtagtcgacaagtcact  25999700                                                                                          --------->LBD16                                                                                         <---------HSFB2a(2)                                                                                         --------->HSFB2a(2)                                                                                        <------NtERF2                                                                                        <---------LBD16                                                                                       ------>NtERF2                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)                                                                                     --------->ATERF1(1)                                                                                    ------>NtERF2                                                                                    --------->LBD16         --------->ANAC58                                                           <---------ATERF1(1)         --------->ANAC46                                                         <---------LBD16         --------->ANAC58               <----------DOF2 <---------ARR14(2)        <-----------------AGL1      --------->ANAC46     ---------->DOF2              ------->TEIL  ----------------------->TaNAC69(2) ------DOF2             <---------HSFB2a(2)             --------->ARR14(2)     --------->ATERF1(1) -----DAG2              --------->HSFB2a(2)            <---------CCA1(2)      <---------ATERF1(1)   ttctccaaacgacgcaatggtctcatcgagaaagctcgacaactttcaattctctgtgaatcttccatcgctgttctcgtcgtctccggctccggaaaac  25999800                                                 ------>ZmHOX2a(2)                                                 =========================HOX2a_HOX2a                                               <---------AGP1                                    ----                                               --------->ARR14(2)                            --------                                            --------->HSFB2a(2)                             <--------                                            <---------HSFB2a(2)                             ---------                          --------->At4g35610  <---------ARR14(2)                          ----------                          <---------ZAT2   <---------LBD16                                 <---------                     --------->ANAC58     ----------->RAV1(2)                              <---------                     --------->ANAC58  =================HOX2a_HOX2a                        ----------                ----------->HVH21      ------>ZmHOX2a(1)                                   <---------              --------->At4g35610    ================================================================              --------->LBD16        <-----------------AGL2                             <----------DOF2              <---------At4g35610    ----------------->AG                        <---------AHL20(2)            <-----------RAV1(2)      <-----------------AGL1                <----------DOF2 ==========            <---------LBD16       <----------DOF2<---------MYB59   <----------DOF2      <---------DAG2           ------>NtERF2  <---------At4g35610  <---------ARR11(3)  ------>ZmHOX2a(1) <-----------GT1   tctacaagtctgcctccggtgacaagtaagctgctactttcctcttctggatctaactcgagttctgtcctttctctctttgtttaatcactttccccat  25999900                                                         <---------DAG2                                                         <----------DOF2                                                  ------>ZmHOX2a(2)                                                  ============================HOX2a_HOX2a        --------->TOE1(3)                        --------->GLK1(1) ------>DOF2                                     <---------GLK1(1) ->LBD16--------->TOE2(3)                        <------ZmHOX2a(2) -------AGL15                                    =============================HOX2a_HOX2a ------>AGL15                                   --------->ARR11(3)                     --------->At4g35610 ------->AGL3                                   <---------ARR11(3)                 <----------DOF2 --------AGL1                                   --------->ARR14(2)         <---------At4g35610   ---- --------AGL2                                   <---------AGP1 <---------------AGL15   <---------At4g35610 ------->AGL2         <---------DAG2            <---------ARR14(2)         <---------ZAT2        ---- --------AG <---------CCA1(2)                  <---------CCA1(2)           --------->At4g35610 ------ =======MADS_MADS     <----------DOF2  <---------ATHB12 <---------DAG2 <------ZmHOX2a(1)       <----- ==============================================================================MADS_MADS--------->TOE1(3)   atagcaataacctcaaatctagggctttttgtttccttcaaatcaacttagatctccccctttttctgtatgaggagagctgatgctttagcttaaacct  26000000  Previous    Next  AGI:  At5g65050.1    Description:  AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31); transcription factor. Identical to Agamous-like MADS-box protein AGL31 (AGL31) [Arabidopsis Thaliana] (GB:Q9FPN7;GB:Q84NB5;GB:Q9FGD9); similar to MAF3 (MADS AFFECTING FLOWERING 3), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65060.1); similar to 80C09_24 [Brassica rapa subsp. pekinensis] (GB:AAZ41835.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 25999480    to: 26003552    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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