Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ANAC58                       <-----------GT1                   <---------ANAC58  <------ZmHOX2a(2) ------>MYB46(1)                        -------                --------------------->WRI1--------->YAB1 --------->AHL20(2)               ------->GAMYB   <---------AHL20(2)         <-----------RAV1(1)      ------>MYB83                      <---------MYB52(2)  --------->AHL20(2)          <---------MYB46(3)     <---------MYB59                     --------->MYB46(3) --WOX13(1)     <----------DOF2<-------GAMYB ----------->GT1   --------->ANAC46        --------->MYB52(1)   aatattaaatacagatagctttcttggtttcgctgttggatcaaatatagtaataccaaataactactcaacttgatttcatgaagaaacaacgaacaac  25980100                                      --------->ATHB12                                     <---------YAB1              <---------ANAC58                                   <---------ICU4                <---------ANAC58                                --------->YAB1                 --------->ARR11(3)                                --------->WOX13(1)             <---------ARR11(3)                               --------->MYB46(3)       --------->YAB1                          --------->TOE2(3)             --------->ATHB12                          --------->AtMYB61             -------->HAHB4                          ------->GAMYB                 <---------ICU4                              -                  <----------DOF2  --------->YAB1      <---------YAB1                      --------->LBD16                 <---------ANAC58 <---------ATHB12     --------->ICU4                      <---------      <---------MYB52(2) --------->MYB46(3)         --------->ICU4        ----------->RAV1(2)      <- ---->RAV1(1)    <---------ANAC58 --------->ICU4   --------->ARR11(3)   <-----------GT1   <---------ANAC46   aaaaacaaacaaaccagtggctttgcaaccacaacaatcatgagtgaaacagagataatgattaagagcttgttttacctgtggaaataactccgtgaga  25980200                                                ------->GAMYB                                              --------->ANAC58                                              --------->ANAC58                                              -------->P                                          --------->ANAC58                                     ----------->RAV1(1)                                 --------->TOE2(2)                                 --------->TOE1(2)                               --------->GLK1(2)--------->YAB1                               --------->ARR14(2)       --------->ANAC58                               <---------ARR14(2)       <---------ANAC55(2)                              <---------GLK1(1) --------->TOE2(3)                      <---------DAG2 --------->YAB1       <---------ATHB12    --------->ANAC58   --------->YAB1     ---------->DOF2 ---------->GT1      <-----------HVH21  ---------->DOF2 --------->ANAC58     --------->TOE2(3) --HVH21   <------ZmHOX2a(2)  --------->GLK1(1)--------->MYB46(3)   <---------YAB1     <----------DOF2 --------WOX13(1)   --------->ANAC46----------->HVH21   --------->ANAC55(2)  --------->TOE1(3)   gattgataaaccgatctaaaacccatcactggaaatctgcgacaaagcaaccaaaatcacgaatcacattgtgcttaaaccctaaaaccctttttcatgc  25980300                       --------->HSFB2a(2)                       <---------At4g35610                       <---------HSFB2a(2)                      <---------TOE2(3)   --------->CCA1(2)                      <-------TEIL                   <---------AHL20(2)          ----------->ARR10                ---------->DOF2         <------NtERF2--------->AHL20(2)     --------->MYB52(1)   tcagaataaacagacgaacaaaggtccagaaacaaaatgggtcgcgatttgaaatttaaacaaattaagctaagaacaaaactgagatttgattcaatag  25980400                                 <---------ARR14(2)                                 --------->ARR14(2)                        <------NtERF2                        <---------At4g35610                      --------->ANAC46                         ----------->GT1                      <---------RAP2.6(2)              <---------At4g35610                      -----                     <---------LBD16     <---------TOE1(2)    --------->DAG2          --------->AHL20(2)       <---------MYB52(2)  <------NtERF2 <---------TOE2(2)   *TSS        <----------DOF2      <------     --------->ZAT6 <-----------RAV1(1) <-----------RAV1(2)  ---------->DOF2          <---------AHL20(2)   <-----------HVH21================================RAV--------->At4g35610           --------->AHL20(2)   tcccttgtcactaacatcgtttatgcggcagagcaaattttctcaggttttgggttttgctgaaaaagtgaaatgctttcttctctatttattttctggt  25980500                           <---------ICU4                          --------->ICU4                       --------->TGA2(2)                      <-----------TGA1                     <---------O2                     --------->O2                     <---------TGA1a                     --------->ANAC55(1)                     --------->TGA1a                     --------->ANAC46                     --------->ANAC55(2)                     --------->ANAC58                     --------->ANAC58                     <---------ANAC55(2)                                                          <--                    <-----------bZIP910(1)                                                       <---                    <-----------STF1                                           --------->YAB1 -------        <---------AHL20(2)<---------YAB1                                    <-----------GT1   <------       --------->YAB1--------->bZIP60(2)                                  --------->AHL20(2) --------  <---------YAB1----------->HVH21                                         <---------AHL20(2) -------- ------>HVH21  <---------WOX13(1)                              --------->GLK1(1)    ----------->GT1 ---At4g35610--------->ATHB12                        <---------YAB1--------->HSFB2a(2) <-----------GT1   gaccatgaataaaaatggttgacacgtcatcattcattttcttacaacgagttttttgattacacatttccagtattttaatcatatagttactacctta  25980600                                          --------->AHL20(2)                                      --------->AHL20(2)        <-----------GT1               <---------AHL20(2)                                           -- -------REM1(1)                       --------->AHL20(1)                                           -- ------TOE2(3)                        <---------AHL20(1)                                        ----- -------->AGL15                 <---------GLK1(2)                                             ------>MYB83 ---------AGL15            --------->TOE2(3)                                                  ------>MYB46(1) ->TOE1(3)               --------->ARR11(3)                                              --------->ANAC46 ->TOE2(3)               <---------ARR11(3)<---------AHL20(2)                         <---------ATHB12   atgtagcaaattacaaaattttgtagagaccttagattattttattaaatcaagttagaaaccgatgtttacagagacatttagtctaatcacaccaact  25980700      <----------DOF2     ------>ZmHOX2a(2)     ================================HOX2a_HOX2a    =================================HOX2a_HOX2a    <------ZmHOX2a(2)   --------->ARR11(3)   <---------ARR14(3)   --------->ARR14(3)   <---------ARR11(3)   <---------ARR14(2)   --------->ARR14(2)                                     <---------WOX13(1) --------->YAB1  --------->RVE1(1)                <-----------GT1      --------->ATHB12     <---------ICU4 ------->YAB1               <---------TOE2(3)          <---------YAB1       --------->ICU4 -------->DOF2            ---------->DOF2  <---------AHL20(2)             --------->YAB1            < ---->YAB1     <----------DOF2<------ZmHOX2a(1)       <---------ANAC46 --------->YAB1               <   ataaagatctttcatttctttgtaacaacaaaggatttatccaatttttatgagttgctgattgagtctgtaagcataataatgtcattaacaagaacaa  25980800                                                                  ------>ZmHOX2a(1)                        --------->At4g35610                   --------->ARR14(2)             --------->ATHB12             <----------DOF2     <---------ARR14(2)            <---------YAB1        <---------YAB1             ------>MYB83 <---------ANAC58    <---------ANAC58    XXXXXXXXXXXXXXXXXXXX>MIR774B       --------->AtMYB61    --------->ANAC58    <---------ANAC58    <---------At4g35610      <-------TEIL------>MYB46(1)    --------->ANAC46 <----------DOF2   <---------ANAC58      <---------ANAC58  <---------MYB111(1)  --------->ANAC58 <--- ---------ANAC58   <---------ANAC58--------->ATHB12    --------->MYB46(3) <---------ANAC46       <--- ---------ANAC58   ----------->RAV1(2)   <---------ANAC58 --------->ANAC46<---------ANAC58       <---   ttgctttcttgttgatgatttgcctgagatgaaaacatgagtggctttagattcacatccaccaaatcctcttgtttcgtccaagaaactgcctcgtttc  25980900                                    --------->ANAC46                                  <---------ALFIN1   ------->GAMYB                                 <---------ZAT14    --------->MYB46(3)                                 <------NtERF2     --------->ANAC58                    <---------ANAC58                                 --------->ZAT14   --------->ANAC58                    <---------ANAC58       --------->DEAR3(1)        <---------ZAT18   -------->P     --------->GLK1(2)<---------ANAC58 ------ANAC58                    --------->ZAT18--------->At4g35610                <---------ANAC46 ------ANAC46       --------->HSFB2a(2) --------->At4g35610       <---------ARR14(2)   <---------ANAC46 ------ANAC58       <---------HSFB2a(2) <---------At4g35610---------->DOF2         <---------ANAC58   cttgtaacgccgatgtaatcttacagaacaaaggctgcactcagcaaaacagcaaccaagttaaagagaatattgtatcacattgacttgtgtgtgtgtg  25981000  Previous    Next  AGI:  At5g64980.1    Description:  transcription regulator. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43069.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain UBA-like (InterPro:IPR009060) Range:  from: 25978001    to: 25980461    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g64990.1    Description:  AtRABH1a (Arabidopsis Rab GTPase homolog H1a); GTP binding. similar to AtRABH1e (Arabidopsis Rab GTPase homolog H1e), GTP binding [Arabidopsis thaliana] (TAIR:AT5G10260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66868.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Rab6-related (InterPro:IPR015600); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579) Range:  from: 25980788    to: 25982018    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version