Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->ARR11(3)                          <---------ARR11(3)                         --------->RVE1(1)                  >>>>>>>>>>WRKY43                  >>>>>>>>>>WRKY38                  <---------WRKY18(1)                                                           <----       <------ZmHOX2a(1) --------->CCA1(1)                                                      -----     ----------->GT1   ------>MYB83                                                             ----- <---------YAB1   >>>>>>>>>>WRKY26                                            --------->TOE2(3)------ -------------AGL15    ------>MYB46(1)                                    ------->TEIL     <---------AHL20(2) ------------>AGL15  <---------MYB59                                    <<<<<<<<<EIN3     --------->AHL20(2) ----->TOE2(3) <---------ANAC55(2)             <---------WRKY12   <-----------GT1         <---------AHL20(2) ---->At4g35610--------->ANAC55(2) <-----------GT1              --------->AHL20(2)     --------->WOX13(1)   cttaatataggaaaaatacttgaccaaatatctgaattaacttgtaagttcaacgaattcttcaaattatacaatgtatatgttaatgtcaattaaatag  25965800                                                                                 <---------AHL20(2)                                                                               <---------ANAC55(2)                                                                          --------------->AtSPL8      <---------YAB1                                                      --------------->AtSPL3     <---------AHL20(1)                                                  <-------TEIL  --------->YAB1                                <----------DOF2          --------->ZAT14  <---------AHL20(2)                           <---------ANAC58       <---------DEAR3(2)  --------->AHL20(2)                           <---------ANAC58      ------>ZmHOX2a(2) -----ANAC55(2)                               <-------TEIL         --------->ARR14(2) ------>GT1                              --------->HSFB2a(2)       <---------ARR14(2)       --------- ---->ANAC55(2)                   <---------TOE2(3)        <---------ATHB12    --------->ANAC55(2) --->MYB59                 --------->ICU4<---------HSFB2a(2)      <------ZmHOX2a(1) <---------WOX13(1)   gtaataatatgtttactcgatttttagcgataatttgatgtttctaggtgctttctgttcaatgaataggatcggttcagtacttaattgaactaaaagt  25965900                                                                 <<<<<<<<<<MYB80                                                             <---------MYB52(1)                                                         <---------ATHB12                                                        ------>MYB83                                                        ------>MYB46(1)                                                       --------->WOX13(1)                                                     --------->MYB46(3)                      <-----------GT1              ------>MYB46(1)             <------ZmHOX2a(1)                     ------>MYB83 <------MYB46(1)                  ----        <---------ANAC58                         <---------MYB59<------MYB83                    ----- ->DOF2 <---------ANAC58                      <------ZmHOX2a(1)--------->MYB59     ---------->DOF2<--   catacatatagcttaggaccagattaacataccaagtagtcgagtttaggaccgaaccaatcagtttggtttgaagatggaccataaaagtgtttggaaa  25966000                                                                         --------->YAB1                                                                       ------>MYB83                                                                    --------->MYB46(3)                                                                   --------->ANAC58                                                                   --------->ANAC58       --------->AHL20(2)                  <-----------GT1     --------->ANAC46       --------->YAB1             <------NtERF2                --------->ZAT6          <---------ARR11(3) ----->DAG2                --------->MYB52(2)        <---------bZIP60(2)<---------ATHB12 ----->DOF2--------->AHL20(2)   <---------PCF2       <---------ANAC58  ------>MYB46(1) --------->ARR11(3) -------------AtSPL8       <-----------RAV1(1)       <---------ANAC58 --------->WOX13(1)     ------>ZmHOX2a(1)   aaggaacaataaaaaaaatcgcacaatgtttgtggctccgataaataacacgatgaggtgtcttaacacaaccaatcaaaacacaagaacatctccttca  25966100                       ------>ZmHOX2a(1)                       <----------DOF2                    ---------->ID1                 <-------MYC2                 <-------PIF5                 ------->PIF5                 ------->MYC2                 ------->MYC3                 <-------MYC3                 <-------MYC4                 ------->MYC4                --------->TGA1a                --------->ANAC55(2)                <---------ANAC55(2)                <--------ABF1                            <---------AHL20(2)                ==================bZIP_DOF              <---------AHL20(2)                --------->O2           <----------DOF2  --------->AHL20(2)                --------->bZIP60(2)--------->ANAC46     <---------AHL20(1)                <<<<<<<<<<HY5 --------->ARR14(2)     <---------ICU4                         ---------                <<<<<<<<<<AtMYC2 <---------ALFIN1   --------->ICU4                          ---------                <---------O2 <---------CCA1(2)      <---------YAB1            <---------MYB46(3)                ==================bZIP_DOF    <---------AHL20(2)           <-----------RAV1(1)     <-                <---------TGA1a --------->MYB46(3)--------->YAB1  <-----------GT1         ------->TEIL                <<<<<<<<<<ABI5<---------ARR14(2) <---------YAB1  <-----------GT1 <-------TEIL      *TSS   ctaatctcatcttatgccacgtgtccttttcatatccaccccttttattttatcataatttttttttttaacattctctgtggttcgtcatgaacctcaa  25966200                        --------->ANAC46                       ------->GAMYB                                       --------->ANAC58                      <---------MYB111(2)                         --------->RVE1(1)                      <---------MYB52(2)                         --------->GLK1(2)                      <---------MYB55(2)                 <<<<<<<<<TBF1     --------->ANAC58            ---------->DOF2                        <<<<<<<<<TBF1 <---------ARR11(3) >TOE1(3) <---------ZAT14                       <<<<<<<<<TBF1    --------->ARR11(3) >TOE2(3) --------->ZAT14            <-----------GT1  <<<<<<<<<TBF1        --------->ANAC46 ----------GT1        --------->MYB46(3)     <<<<<<<<<TBF1      <---------GLK1(2)                 <--   aaaacctctcactgcaaagtgccaacaaacaacaagtcttcaccttcttcttcttcttcttcttcaaaatctcttgtacgcaaataatccatgagaaact  25966300                                                                                   --------->TOE2(3)              ------>ZmHOX2a(2)                                                   --------->YAB1             --------->GLK1(1)                       <<<<<<<<<TBF1               <---------ATHB12             <---------GLK1(1)             ------>NtERF2                        ------>MYB83             <------ZmHOX2a(2)     <---------YAB1 <<<<<<<<<TBF1                 ------>MYB46(1)            --------->ARR11(3)   --------------->AGL15                        <---------MYB46(2)            <---------ARR11(3)   <---------------AGL15                        <---------MYB59    <-----------GT1           <-----------GT1    --------------------->WRI1<-----------GT1        --- -------TOE2(3)        --------->LBD16    <---------RAP2.6(2)           <----------DOF2           ---   agggtttaacttgagatctctcttccgaagtattaccatcaatggcgacttcttcttcttcatcgtcgtctctgcttttaccaaacatcaatttcaactc  25966400                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                  <--------                                         <---------HSFB2a(1)                                <--------                                         --------->HSFB2a(1)                               --------->SPL7                                        --------->ARR14(2)                               --------->TOE1(2)                                        <---------ARR14(2)                               <---------SPL7                                        <---------ARR14(3)                              <---------ANAC58                                      <------NtERF2                                     <---------ANAC58                                     --------->LBD16                                   <-------TEIL                                     ------>NtERF2                                     <-------------                        <---------ANAC46<---------ARR11(3)                             --------------                        <---------ANAC58--------->ARR11(3)                           --------->ARR14(2)            --------->WOX13(1)      --------->LBD16                                  <---------ARR14(2)            --------->YAB1          <---------LBD16                                  <---------GLK1(2)           --------->MYB46(3)      <---------LBD16                                 --------->LBD16         ----------->RAV1(1)     ------->GAMYB                                   <---------LBD16 ------>ANAC58          <---------ANAC58--------->ARR14(3)       XXXXXXXXXXXXXXXXXXXX>MIR167C      -- ------>ANAC58<---------ATHB12  --------->MYB46(3)  --------->LBD16      --------->YAB1--------------   aagacaatctccaacaatcactcgttccgtttcaatcgccgggatcttcttacccagaaaccgattaagctacaatcacaatctccggattcgtacgaga  25966500                                                  <---------ANAC46                                                --------->ZAT14                                         <---------YAB1                                       ------>ZmHOX2a(2)                             <-------MYC2                                       ----------->GT1            <---------MYB46(3) ------->MYC2                                      <------ZmHOX2a(2)         --------->At5g28300  <-------MYC3                                     --------->ARR14(3)        ------->GAMYB         ------->MYC3  --------->YAB1                     <---------ARR11(3)      <---------------------WRI1       ------- -TOE2(1)                            <---------ARR14(3)     --------->MYB52(1)     ------->TEIL -TOE1(1)                            --------->ARR11(3)    <---------WRKY12      <---------ZAT18 --AtSPL3                            --------->ARR14(2)  <---------ARR11(3)      --------->ZAT18 ->AtSPL3              <-----------RAV1(1)      <---------ZAT14----------->GT1   <---------ZAT14----- ------->WOX13(1)    <---------ICU4  <---------ARR14(2)  --------->ARR11(3)      --------->ZAT14<---- ->AtSPL8   ---------->DOF2   <-------GAMYB --------->ICU4<------ZmHOX2a(2)------->GAMYB      -------   ttaatcagagcttctaaagacgataatgtcgctgttgaagatcgtgataatgcagtgaagatcaacggtgattacaacggaagtgcacgtttaaacggta  25966600                         ----------->ARR10                       ------->GAMYB                     --------->At4g35610                     <---------At4g35610                           <------MYB46(1)                    --------->MYB52(1)                             <---------ANAC46                    <---------DOF5.7(2)                            <------MYB83             --------->ARR14(2)  <---------LBD16                  --------->MYB46(2)            <---------GLK1(1)   <-----------GT1                   --------->MYB111(2)       <---------HSFB2a(2) --------->ARR11(3)                 --------->MYB52(2)       --------->HSFB2a(2) <---------ARR11(3)                 <---------MYB46(3) <---------ARR14(2)<---------WRKY12                         <---------MYB52(1) --------->ARR14(2)<---------WRKY38(1)                     ------->GAMYB                   --------->MYB52(1) -->At5g28300--------->GLK1(2)<---------AHL20(2)        <---------DOF5.7(2)       --------->ANAC58  - ---->MYB52(1)    --------->DOF5.7(2)                   --------->MYB52(1)        xxxxxxxxxxxxxxxxxxx -----DOF5.7(2)  <-----------HVH21 ------->GAMYB      --------->DOF5.7(2)         --------->ANAC58 <- -->DOF5.7(2)<---------ARR14(2) --------->MYB52(1)    --------->At5g28300     ----------->HVH21    --   acggctctgcgagaaaatccgtcaacggagattttaacggaagtgctcgtttgaacggtaacggtagtttggtgaagtatgtgaacggaagtgtaacggt  25966700  Previous    Next  AGI:  At5g64940.1    Description:  ATATH13 (ABC2 homolog 13). similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT3G07700.1); similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT3G07700.2); similar to unknown [Picea sitchensis] (GB:ABK25165.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71779.1); similar to hypothetical protein OsI_007628 [Oryza sativa (indica cultivar-group)] (GB:EAY86395.1); contains InterPro domain ABC-1 (InterPro:IPR004147); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 25966199    to: 25971048    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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