Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ICU4                                                               --------->ATHB12                                                              <---------YAB1        --------->ETT(2)                       <---------At4g35610                    --------->ICU4        <---------ETT(2)                       --------->At4g35610                    <---------ATHB12 <---------GLK1(2)                      ------->TEIL                           <---------TOE2(3) --------->ARR14(2)          <---------ANAC58                         <-----------GT1    ---------->DOF2       ---------          <---------ANAC58               <---------MYB59    --------->YAB1     <---------ARR14(2)   <   tgaacaaaaaatacttgctaaatgcagcttaagcctctatgggcctaacctatttagcccattaatgatttgtaaagaccagattgtcgacccataaatt  25957500                                           <---------bZIP60(1)                                           --------->ETT(2)                                           <---------ETT(2)                                           --------->bZIP60(1)                                         --------->MYB52(1)                                        ----------->TGA1                                  --------->MYB52(1)                                              ---                           --------->MYB52(1)                                                     <--                          ----------->HVH21<---------TGA2(1)<---------AHL20(2)                  -----                     <-----------------------TaNAC69(2)  ----------->GT1                      <------ >AHL20(2)  --------->AHL20(2)   ----------->HVH21--------->TOE2(3)   <<<<<<<<<GATA-1         <------ ----------DOF2    ----------->TGA1     ----------->HVH21<---------ZAT6                <---------YAB1   gtctttaaacttaagtaaatggtgacgactgacgactgacgactgacgacatccttgaagagttaattgtttatctattagttaatgctattattctccg  25957600              <-----------GT1          --------->AHL20(2)       <---------RVE1(1)      <---------ARR11(3)      --------->ARR11(3)                                    --------->GLK1(1)          --------->ANAC58 ------>ARR14(2)     <-----------GT1                       --------->ARR11(3)          --------->ANAC46 -------ARR14(2)   <---------YAB1                          <---------ARR11(3)   <---------YAB1 ------ ---->LBD16<---------ICU4                          --------->AHL20(2)         --------->YAB1========= ---LBD16 <---------AHL20(2)          --------->ATHB12 ---------->DOF2       <-------TEIL   --------- -----------AGL1<---------YAB1       <---------YAB1<---------AHL20(2)<-----------GT1   --------->ANAC58   gttttggagatattaattactattatccagcctgtcattttcattggtgcaaattaaaaaagatttctatttttccatattcatcatacacgctgaaaga  25957700                             <------NtERF2                           <---------WRKY12                         <-----------TGA1                         <-----------HVH21                        --------->TGA1a  --------->ANAC46                        <---------ANAC55(2)                        <---------TGA1a  --------->ANAC58                        --------->O2     --------->ANAC55(2)                        --------->ANAC55(1)           <---------AHL20(2)                        <---------O2     --------->ANAC58                        --------->ANAC46 --------->ANAC55(1)                        --------->ANAC55(2)        ----------->GT1    <-----------GT1                        --------->bZIP60(2)       ----------->GT1  <---------ICU4                 <--                        --------->ANAC58 <---------ANAC55(2)       --------->YAB1             ------>NtERF2                        --------->ANAC58<-------TEIL  --------->AHL20(2)<---------YAB1        -------                   ----------->HVH21  --------->TOE2(2)           --------->AHL20(2)         <-------            <---------MYB46(3)        --------->TOE1(2)           --------->ICU4            <-------- --->YAB1 <---------MYB52(1) --------->At4g35610 <---------TOE2(3)<---------ATHB51          <------NtERF2 =================================bZIP_DOF       <---------TOE1(3)<---------AHL20(2)<---------MYB52(1) ->DOF2 <---------MYB46(3)--------->TGA2(2)   --------->ICU4----------->GT1   <-----------GT1--------   taacatttagccgttggatgtatgacacgtcagcgataaacatacgtaatgaaggtttaaatgagtaaataattacgatattaccccttaagtccccgcg  25957800    <---------AHL20(2)    --------->AHL20(2)   --------->AHL20(2)                                                                             ---   --------->AHL20(1)               ---------->DOF2                                               ---   <---------AHL20(2)         <----------ID1                                                      <--   <---------AHL20(1)        ------------------------>ANAC81                                      --- --------DOF2                ----------->GT1                      <-----------GT1          --------->AHL20(2) -->LBD16              ---------->DOF2                       <---------YAB1             ----------->GT1 --ALFIN1             --------->AHL20(2)                 <---------GLK1(2)             ----------->GT1 -LBD16 <---------AHL20(2) ---------->DOF2          --------->MYB52(1)         <---------MYB46(3) --- ->ANAC46      ----------->GT1----------->GT1     <---------MYB52(2)          <---------WOX13(1)  ---   cttaatttattttttgagggaaaataaaagaaaggaaaaaaagaaaacaaaaactaacaaattcttatttacatctactgatggatgggacgttaaaatc  25957900                                                                                              -------                                                                                            ---------                                                                                       --------->DEAR3(1)                                                                                       --------->ANAC46                                                                                       ------->GAMYB                                                                                       --------->RAP2.6(2)                                                                                      <------------AtMYB77                                                                                      --------->DEAR3(2)                                                                                      --------->MYB46(3)                                                                                      <---------MYB55(2)                                                                                    --------->MYB52(1)                                                                                   ------>ZmHOX2a(1)        <------ZmHOX2a(1)                                                         <---------MYB59    ---------->DOF2                                                              ------>ZmHOX2a(2)  --------->ANAC58                                                              <------ZmHOX2a(2)  --------->ANAC58             <-------TEIL                                    --------->ARR11(3) ------>ANAC58                 --------->ZAT14                                 <---------ARR11(3) ------>ANAC46             --------------->AtSPL3                              <---------ARR14(2) -------ANAC55(2)          <---------------AtSPL8                              --------->AGP1<------- ------>ANAC55(1)          <-----------------------TaNAC69(2)                  --------->ARR14(2) ------>ANAC55(2)          <---------------AtSPL3         <----------DOF2      <---------GLK1(2) ------>ANAC58   ---------->DOF2     *TSS            ---------->ID1           <---------At4g35610 ---   acgcaagaaaggacgactgaaaagagagagaggtacagtccaaaaaaacctcttcgtcttctttgattttcgaaattctcagatcctaaccgccattaat  25958000             ---------->ID1         <----------DOF2         <---------DAG2                              <-----------GT1     <--------P                                     <-------TEIL   --------->ZAT2                                  --------->CCA1(2) <-----------RAV1(2)                              <---------ARR14(2) -->YAB1<---------ANAC58                          --------->ARR14(2) >ICU4  <---------ANAC46                   <---------At4g35610    ------>ZmHOX2a(1) --ICU4 <---------ANAC58                   --------->At4g35610 ------>ZmHOX2a(1)      <----------DOF2 ------>ANAC46                          ---------->DOF2 <---------GLK1(2)      <----------DOF2  <----   accccaggttgctttttccctctgtttctctcttcttctagccaaagctgaagattcacattctcctcctctcgctgataactttgtgttttttggattt  25958100                                                                  --------->HSFB2a(2)                                                             <---------HSFB2a(1)                                                             --------->HSFC1(2)                                                             <---------HSFC1(2)                                                             --------->HSFB2a(1)                                                            ----------->ARR10                      <-                                                           <------ZmHOX2a(1)                       --                                                      --------->HSFB2a(2)                <---------ANAC58                                                      <---------HSFB2a(2)                <---------ANAC58                                                    <-------TEIL  <---------HSFB2a(2)    <---------ANAC46                                                 --------->HSFC1(2)                 <-----------RAV1(1)             --------->ZAT6                      <---------HSFC1(2)          --------->At5g28300  <--           <-----------GT1 <------ZmHOX2a(1)     <---------HSFB2a(1)        --------->RAP2.6(2)   <--        ----------->GT1  <---------TOE2(3)       --------->HSFB2a(1)   <------ZmHOX2a(1)<-------TEIL< -----AHL20(2) --------->ANAC46                <------ZmHOX2a(1)<-------TEIL----------->GT1     <----   ttttttggtctagttacactcgagaatgaggaagggaacgaagaagagaggaggttcgagaggaggttcgcgaggaggccgtaaaactggtgcgtcttcg  25958200                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                          --------->MYB52(1)     <---                                  ----------->HVH21                      <---------ARR14(2)      ----                                  --------->O2                           --------->ARR14(2)     <---- <---------ANAC46            --------->ANAC46<------ZmHOX2a(1)--------->At4g35610            <------- --------DEAR3(2)      --------->MYB55(2)   --------->At4g35610 ----------->HVH21            <------- ---->NtERF2           <---------MYB46(3)   <---------At4g35610<------ZmHOX2a(1)             -------- -------DEAR3(1)      --------->ALFIN1------>NtERF2         <-----------RAV1(2)      --------->DAG2-- -------At1g77200     <---------AtMYB61   <-----------RAV1(2) <---------At4g35610    <---------TOE2(3) ------NtERF2       <---------ANAC46 <---------DEAR3(1)     <---------LBD16      <------ZmHOX2a(1)<-- -------HVH21      <---------DEAR3(1)--------->DEAR3(1)<---------ZAT18  <------ZmHOX2a(1)  <---------GLK1(2)   tcggcgagtaagaacgatgatgcggtggtagaggccacgacgacgcaggagacacagcctactcaggagacagaggaaacggaggataaggtggaatctc  25958300         --------->ALFIN1        <------ZmHOX2a(1)  --------->ATERF1(1)  ----------->RAV1(2)  <------NtERF2 <---------ATERF1(1) ------>NtERF2 <---------RAP2.3(1) ---------DEAR3(1) -------->DEAR3(1) ------->ATERF1(1) ------->RAP2.3(1) ------->DEAR4(2)                                                                      --------->ALFIN1 ------>LBD16                                                                         <------ZmHOX2a(1) -------RAP2.3(1)                                              <---------TOE1(3)    --------->ALFIN1 --->NtERF2                                                    <---------AtMYB61 <---------ANAC46 ------DEAR3(1)            >>>>>>>>>TBF1                       <---------TOE2(3)<---------At4g35610 ----->ANAC46 ----------->GT1                            <---------DEAR3(1)     <---------LBD16 -----LBD16  ----------->GT1                            --------->At4g35610     --------->At4g35610 --HSFC1(2)<------ZmHOX2a(1)     <---------MYB52(2)     <---------At4g35610     <------NtERF2 --HSFB2a(1)<---------------------WRI1                  --------->ATERF1(1)   <---------RAP2.3(3) ->HSFB2a(1)------------------------>ANAC81          <------ZmHOX2a(1)        <---------DEAR3(1) ------->ORA47(2)     <----------ID1           <------ZmHOX2a(1)      ------->TEIL--------->LBD16 -------ATERF1(1)   --------->MYB52(1)    --------->GLK1(2)<------NtERF2   <---------TOE2(3)   cggcgcctgaggaggagggaaaaaacgaagaagaagcgaacgagaatcaggaagaggaagcggcgaaggttgaatctaaggctgcggaggagggagggaa  25958400  Previous    Next  AGI:  At5g64910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10010.1); similar to 117M18_4 [Brassica rapa] (GB:AAZ66923.1); similar to 4D11_6 [Brassica rapa subsp. pekinensis] (GB:AAZ67520.1) Range:  from: 25957937    to: 25961340    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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