Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------AHL20(2)                                                --------->AHL20(2)                                               <---------AHL20(2)                                            <---------AHL20(2)                                            --------->AHL20(2)                                           --------->AHL20(2)                                           <---------AHL20(2)                                     --------->YAB1     =================HOX2a_HOX2a            <---------ICU4           ----------->GT1    ------>ZmHOX2a(2)                <---------AHL20(2) --->AHL20(2)           --------->AHL20(2) <---------AHL20(1)        --------->YAB1     --------->AHL20(2) ----AHL20(2)           <---------AHL20(2) --------->AHL20(1)     ------>ZmHOX2a(1) --------->ICU4   tattctgaacatactaatgaccataaatatttagttcgattgtaatttatttatttgatccaaacttcctataagaaattaggggaaatattaaatattc  25954000                        --------->SPL7                      <---------SPL7--------->ZAT14                      ----------->HVH21                                                  --------->At4g35610                     --------->TOE1(1)                                                   <---------At4g35610                     --------->TOE2(1)                                                   --------->ZAT2                    <---------At4g35610                                            --------->AHL20(1)                    --------->At4g35610                                            <---------AHL20(1)                <-----------TGA1    <---------ZAT14                       <---------ARR14(2)                <-----------HVH21   --------->ZAT18                       --------->ARR14(2)               --------->YAB1------>NtERF2                        --------->KAN4(2)--------->AHL20(2)              <-------TEIL<---------ATERF1(1)                ----------->GT1       <---------AHL20(2)         ----------->RAV1(1)--------->DEAR3(1)               --------->ICU4  ----------->GT1   aatctatagtccaacattcgtcatcggacgacgacgagtgaactgttttcgtttttgtttgtaatgtttattccagtatatgtaaaatattagctgagtc  25954100                  ------->GAMYB           --------->ANAC58                                              <---------ANAC58           --------->ANAC58                                              --------->ANAC55(2)         ---------->DOF2                                                 <---------ANAC46       --------->TOE2(3)                                            --------->YAB1       <---------MYB59  ------->MYC3                                <---------ICU4     -------->P   --------->ANAC58                                 <---------AHL20(2)     ------>MYB83 --------->ANAC46                               --------->YAB1     ------>MYB46(1)    ------->MYC2                         <---------AHL20(2)   <---------MYB59--------->ANAC58                          --------->AHL20(1)   <---------MYB111(1)  <-------MYC2            ----------->RAV1(1)<---------YAB1         <---------YAB1   --------->AtMYB61    <-------MYC3      --------->YAB1    <---------AHL20(1)      ------->TEIL    <   <---------MYB46(2)<---------ALFIN1  --------->YAB1  --------->YAB1    <---------ANAC58 --------->ICU4 ------->TEIL   <---------ALFIN1   --------->ZAT6     <---------ATHB12   <---------ANAC55(2)     <---   atcaacctacctaaagccaaacgccacatgcttattttcactaataacaacaacaaatcatatatatttataattacgcgtgaatgaatgtcattcttga  25954200                            --------->YAB1                          --------->GLK1(2)                                                        --                     ---------->DOF2                                                           XXXXXX                 --------->WOX13(1)                                                       ---------->DOF2                <---------AHL20(2)               <---------YAB1       <---------YAB1   --------->AHL20(2) ---------YAB1  --------->AHL20(2)            <---------YAB1 <-----------GT1          --------->AHL20(2) ------YAB1 --------->AHL20(2)           ----------->GT1---------->DOF2           --------->AHL20(2)   ttattttttgtcaactaattaatcaaagaatcagaaaatggactagttattcttattcaaaagtcacgatttatgaattcaccaaaaaataaaaaagagt  25954300                                                                ---------->DOF2                                        ------------>CBF      ----------->TBP                  <---------AHL20(2)    --------->MYB46(3)    <---------YAB1              <---------ATHB12                 <-----------TBP       --------->ANAC58     <---------------AGL15       --------->WOX13(1)       --------->YAB1            <-----------HVH21          --------------->AGL15     <---------ZAT18      <---------YAB1        ---------->DOF2        <<<<<<<<<AtCCA1    ---------->DOF2 ------------>CBF --------->ARR11(3)   ----------->GT1  --------->ANAC58    <-----------------AGL3    --------->ANAC46 <---------ARR11(3)   --------->YAB1 <---------ALFIN1   <---------ZAT18   <---------ARR11(3) ------->ICU4  ------->TEIL--------->ICU4          <<<<<<<<<AtLHY --------->DAG2    <---------LBD16 XXXXXXXXXXXXXX>MIR1888  --------->YAB1--------->ANAC46 --------->ZAT18   --------->ARR11(3)    *TSS   caagatttatgaaaatgtattttatagtaataaagagtcacacccaataccgagttagcccactataaaaggcaaagatgtctctctgcgcaatcactca  25954400                                                                                  --------->GLK1(1)                                                                       ------>ZmHOX2a(2)                                                                      --------->GLK1(1)                                                                      <------ZmHOX2a(2)                                                                     <---------ARR11(3)                                                                     --------->AGP1                                                                     --------->ARR11(3)                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                     <---------AGP1                          --------->AtMYB61                         --------->At4g35610                    ------>ZmHOX2a(1)                   ------>ZmHOX2a(1)         <---------GLK1(1)                --------->ANAC46              ---------->DOF2       <---------CCA1(2)        --------              <---------ALFIN1            --------->YAB1======================HOX2a_HOX2a   <--------          --------->At4g35610       --------->YAB1      =====================HOX2a_HOX2a --------->CCA1(2)   catataaaaaacagcttcactcctctcaccaaaactaatcagattaataaaagttttcctctgtcttatcagatctcaatggagaaatcagatagacgaa  25954500                                                                                           ------>NtERF2                                                                                          -----------                                      --------->AtMYB61                                   --------->ANAC46                                      --------->MYB46(3)                             --------->GLK1(2)                           <---------ANAC58                                         <---------ARR14(2)                           <---------ANAC58                                         <---------ARR11(3)                         <---------ZAT14                                <----------DOF2   <---------ETT(1)   ---------->DOF2       --------->ZAT14------>MYB46(1)          <---------ANAC58   <---------GLK1(2) ->ANAC46             ------>ZmHOX2a(1) ------>MYB83             <---------ANAC58   --------->ARR14(2) -------------WRI1<---------GLK1(1)   <---------MYB59            <---------ANAC46 <---------YAB1   gcgaagaaagtcacctatggattcctcttcagtgcctcgaccaaaccctcagagctatcttgaaatgccttggtctttttcatcaagattctccgacaac  25954600                   --------->MYB46(3)          <---------HSFC1(2)          --------->HSFB2a(1)          --------->HSFC1(2)          <---------HSFB2a(1)         <---------ARR14(2)         --------->ARR14(2)      --------->LBD16      --------->HSFB2a(2)      <---------HSFB2a(2)      --------->ANAC58                                                 <---------AHL20(2)      --------->ANAC46         <----------DOF2                      <---------AHL20(2)           ----      --------->ANAC58      ----------->ARR10                       --------->AHL20(2)          -----     <---------LBD16      <--------P                               <---------AHL20(2)    --------->ANAC46 <---------At4g35610     <---------MYB52(1)                        --------->AHL20(2) --------->ARR14(2) ------>ZmHOX2a(1)---------->DOF2                                 <---------YAB1      --------->ZAT14 --------->At4g35610    <---------RAP2.6(3)                    <---------YAB1      <---------ANAC46 >HVH21--------->LBD16 --------->ATERF1(2)                     --------->ICU4  <---------ZAT14 ------   gtcctctcccggaacttcgaaacagccggtaagctttgcaagagtatattttggactaatatgagattattaatttatgtctgttctgtatacactataa  25954700                                                                                       ----------->GT1                                   <---------AHL20(2)                               <------MYB46(1)                                  <---------AHL20(2)                                <------MYB83                                  --------->AHL20(2)                             --------->CCA1(2)                               <---------AHL20(2)                                --------->ARR14(1)                  <---------------AGL15                                         --------->ARR14(2)       <---------AtLEC2        --------->AHL20(1)                               <---------ARR14(2)     <---------YAB1            --------->AHL20(2)                               --------->ARR11(1)  <---------MYB52(1)          <---------AHL20(2)                            ---------->DOF2     <----  --------->ARR14(2)          --------->ICU4                           <---------ARR11(3)       -----  <---------ARR14(2)          --------->AHL20(2)                       --------->ARR11(3) <---------- -------->MYB.PH3(1)     ----------->GT1                           ---------->DOF2 --------->MYB111(1) ---->DAG2        --------------->AGL15                    --------->AHL20(2)   --------->ARR11(3) ---->DOF2    --------->ICU4  <---------ATHB51      ------------------------>ANAC81--------->MYB59 <-   agcggttatgcatggaatttttaaaaatggaaataatttaatctcttatttgaacaccaaaaaaaatgaaaaagatgttaaagatttggtagtaacaatt  25954800                            <-----------GT1                       <---------AHL20(2)                      --------->AHL20(2)                      --------->ARR11(3)                   <---------YAB1                      --------->AHL20(1)                <---------YAB1                      <---------AHL20(2)              --------->CCA1(2)                      <---------AHL20(1)             --------->ARR14(2) -----AHL20(2)        <---------ARR11(3)             <---------ARR14(2) ---->AHL20(2)   <---------AHL20(2)            <---------STY1(2)                               ------ -GT1 ------->TEIL   --------->AHL20(2)       --------->MYB59                     <----------DOF2 --------YAB1    --------->AHL20(2) <----------DOF2 <------ZmHOX2a(1)          <-----------GT1 ------   tataaatgaacgtttgtatataaatatattttccaatacttttggagttagctaggatatgatcaaagtatttagctatttttactttgagttaatcctg  25954900  Previous    Next  AGI:  At5g64900.1    Description:  ATPEP1/PROPEP1 (Elicitor peptide 1 precursor). Identical to Elicitor peptide 1 precursor (PEP1) [Arabidopsis Thaliana] (GB:Q9LV87;GB:Q8LCK9); similar to PROPEP2 (Elicitor peptide 2 precursor) [Arabidopsis thaliana] (TAIR:AT5G64890.1); similar to 80C09_17 [Brassica rapa subsp. pekinensis] (GB:AAZ41828.1) Range:  from: 25954396    to: 25955319    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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