Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->YAB1                                                                                      <---------ICU4                                                                                      -------->ATHB1                                                                             <---------AHL20(2)                                                                             --------->AHL20(1)    --------->TOE2(3)                                                        --------->AHL20(2)    --------->YAB1                                                          <---------AHL20(2)    --------->TOE1(3)     <---------MYB46(3)                                <---------ATHB12   <---------YAB1         ----------->GT1                                   --------->AHL20(2)  --------->ARR11(3)     <---------AtMYB61                     <---------ARR11(3)--------->AHL20(2)  <---------ARR11(3)     <---------DEAR3(1)                <---------WRKY38(1)   <---------AHL20(2) - -GAMYB                  --------->ALFIN1          <----------DOF2          <---------ATHB51   ------ --MYB46(3)   <-------GAMYB                     <---------ARR11(3)    <-----------GT1<---------ATHB12 --->GT1     ----------->GT1        ------->TEIL--------->ARR11(3)  <---------AHL20(2)--------->ATHB12   aaattatcttaaatgtggttattttcggtggtgatatgtatatttgaagagaacttttgagtcaacatattttaacaaataatttaaatcattgaaaatg  25951400                                                                                <-----------GT1                                                                            <---------AHL20(1)                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)                                                                            <---------AHL20(2)                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                                                        <---------AHL20(2)  ---------                                                                        --------->AHL20(2) --------->AHL20(2)                                                                     -------->ATHB1  ------>MYB46(1)                                                                     <---------ICU4  --------->ANAC58                                                                    --------->ICU4   --------->ANAC58                                                                    <---------ATHB51 -------->P                                                                    <---------AHL20(2)<---------ATHB12                                                                    --------->AHL20(2)--------->MYB46(3)                    <---------YAB1                               <---------AHL20(1) --------->MYB55(1)    <---------AHL20(2)                                           <---------AHL20(2)--------->MYB46(3)   --------->AHL20(2)                <---------YAB1              --------->AHL20(1)<---------MYB46(2)   <---------AHL20(2)<---------ICU4--------->YAB1                --------->AHL20(2)<---------MYB111(2) -------->WOX13(1)  --------->ICU4<---------YAB1                --------->AHL20(2) <---------MYB111(1) --->ICU4    --------->AHL20(2)<---------AHL20(2)    <---------MYB46(3)<---------YAB1------>MYB83   -   atcaattaaatgtcaaaaaatactgattactaatttatgatcaatgttttctcagaggttgagtcattaaattattaatttattaccaaccaattcatta  25951500            ---------->DOF2     <---------AHL20(2)     <---------AHL20(1)     --------->AHL20(1)    --------->ZAT18             <---------WRKY38(1)    --------->AHL20(2)     <---------ZAT14             <---------WRKY12    --------->ANAC58    --------->YAB1         --------->ZAT14          --------->WOX13(1)     --------->ANAC58   <---------YAB1         <---------ANAC46<---------ZAT14                ---------->DOF2 >ATHB12  <---------AHL20(2)              --------->ZAT14    <---------YAB1--------->ANAC46  <------- -------->AHL20(2)       <---------------AtSPL8 --------->WOX13(1)    --------->AtLEC2  <---------YAB1   gatttattatattttaaagaaactaattgtgtacagacatagagtttagtcagtcagtcaactattagagtcatccaaagccactagcttatttttgctg  25951600                                                            <---------AHL20(2)      --------->AHL20(2)                              ------->TEIL                  --------->AHL20(2)      <---------AHL20(2)      ------>MYB83 --------->AHL20(2)   <---------ICU4--------->ANAC55(2)          <---------AHL20(2)      ------>MYB46(1)    <---------AtLEC2             --------->ANAC58             --------->AHL20(2)    <---------MYB59<---------AHL20(2)  <---------YAB1 <---------ANAC55(2)--------->At4g35610   ----------------->AG <-------TEIL   --------->ICU4 --------->ANAC58   <---------At4g35610 --At4g35610      <---------AHL20(2)--------->AHL20(2)--------->ANAC46---------->DOF2   --------->YAB1   ataataccaaattagtgtattttaaatgcatgaaccaattcattattttgtcaactacgtaattaaaaactcaaaagctgactaaataaatcatagtcaa  25951700                                                  <---------AHL20(2)                                          -------->P                                         ------->GAMYB                                        --------->MYB46(3)                                        <---------MYB111(2)                                        <---------MYB111(1)                                        <---------MYB55(2)                            --------->WOX13(1)                                        <---------MYB46(2)                      <----------DOF2                                        <---------MYB52(2)                 ------->TEIL         --------->GLK1(2)             ------>MYB46(1)             ---------->DOF2  ------------>CBF  <----------DOF2                      ------>MYB83    <-----------GT1    <---------CCA1(2)   *TSS   aagtctttgagaaactgtattctattttgaagactgataccaactaccaagtttaattcactatatagacaaagttgtatctctttatcaattactcaca  25951800                                     --------->At4g35610       --------->GLK1(1)                                  <---------At4g35610          <---------GLK1(1)                                  <---------ZAT2        --------->ATHB12                                  --------->ZAT2     ------>MYB46(1)                                 ------>MYB46(1)     ------>MYB83        ---------->DOF2          ------>MYB83      <---------MYB46(2)                           >>>>>      <-------TEIL   ----------->HVH21             <---------MYB111(2)              --------->MYB52(1)     --------->CCA1(2)         <---------MYB59    --------->ANAC46                --------->CCA1(2)   ttgagagatacaaagttgtctctctgacatatacctagctgctcgataactcaccaaactattggatttcaatggagaaattagataaacggagggaaga  25951900                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  ---                                              --------->At4g35610                                ----                                              <---------At4g35610                                <---                                      <---------ARR11(3)                                         ----                                     --------->ZAT2                                              ----                             --------->HSFB2a(2)                                                 ----                             <---------HSFB2a(2)                                                -----                         <---------GLK1(2)--------->YAB1                  <-----------HVH21     <----                     --------->ZAT14------>MYB83               <---------AtMYB61  <------NtERF2 <---- >>>>TBF1            <---------ZAT14------>MYB46(1)<---------ANAC46    <----------DOF2        -------   agaaacttatctatggattccagttcagtttctcgaccaagctctcatagctgtcttgaaatgtattggtcttctttgtcagccagcgaagaaaactgcg  25952000      <---------MYB52(1)      --------->At5g28300     --------->LBD16     ----------->GT1   <---------LBD16 --------->ARR14(2) <---------ARR14(2) -------->ATERF1(1) ---->NtERF2 ----------HVH21 --------ATERF1(1) ------>RAP2.3(2) ------>DEAR3(1) ------>RAP2.3(3) ----->RAP2.3(1)         <--------P ---NtERF2              <---------MYB52(1) ----->DEAR4(2)        <---------RAP2.6(3) ----->ORA47(2)       --------->ATERF1(2)                               <-----------GT1     <-------- ----->ATERF1(1)    ------>MYB83                                      <----------DOF2      --------->AHL20(2) ->NtERF2           ------>MYB46(1)                                  --------->ANAC46      <---------AHL20(2) -----RAP2.3(1)  --------->MYB46(3)        --------->TOE2(3)     <-----------GT1       <---------YAB1 -----ATERF1(1)<-----------GT1       <-----------GT1         <---------ARR11(3)<-----------GT1 -->ZAT18  <----------DOF2    <----------DOF2          <-----------GT1<---------DAG2<---------YAB1  <   ccgtctccggtaacttttaaccagccggtaagctttgtttaacaacatttatcaaatttacaagattatacactttacattttactatgcttattaattt  25952100                                                     --------->ICU4                                              ---------->DOF2                                         <-------GAMYB                                        ----------->GT1                                       --------->LBD16       --------->DAG2                 <---------ANAC58                           ---------->DOF2      ---------->DOF2                 <---------ANAC46             ------>ZmHOX2a(2) --------->ARR11(3) -AHL20(2) <---------MYB46(3)        <---------LBD16<---------KAN4(2)     <---------AHL20(2) ----------DOF2       --------->AtLEC2<---------ANAC58--------->YAB1      --------->AHL20(2)   <-----   ttcttttaaaaagttgttgtttacatgctaagttgtttttgcgggttaaaaaggaatgatcaaatttgatctgtattaaaatgaaaagatgtcgaaactt  25952200                                                                            --------->TOE2(3)                                                                           ----------->GT1                                                                          <---------TOE2(3)                                                                       <---------YAB1                                                                     --------->YAB1                 <        ----------->GT1--------->TOE2(3)                        --------->YAB1  <---------YAB1------- -----DOF2   --------->ICU4       --------->GLK1(2)----------->TGA1 <---------YAB1     <-----------HVH21   ttggaggtataagtaaaaattgaaaccctagttaataatctgatttagttttgatgacgatgttgatcatattataaatgttaatattcagtcagacaac  25952300  Previous    Next  AGI:  At5g64880.1    Description:  unknown protein Range:  from: 25949516    to: 25951382    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g64890.1    Description:  PROPEP2 (Elicitor peptide 2 precursor). Identical to Elicitor peptide 2 precursor (PEP2) [Arabidopsis Thaliana] (GB:Q9LV88;GB:Q8L902); similar to ATPEP1/PROPEP1 (Elicitor peptide 1 precursor) [Arabidopsis thaliana] (TAIR:AT5G64900.1); similar to 80C09_17 [Brassica rapa subsp. pekinensis] (GB:AAZ41828.1) Range:  from: 25951794    to: 25952747    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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