Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->AHL20(2)               <---------AHL20(2)                            <------MYB83           <---------YAB1                                --------->ATHB12          --------->AHL20(2)                            <---------YAB1     --------->ARR11(3)          <---------AHL20(1)                     --------->DAG2     <----------DOF2          <---------AHL20(2)                 --------->YAB1  <---------MYB46(3)                   ---          --------->AHL20(1)            <---------ARR11(3)   <------MYB46(1)                   ------         --------->AHL20(2)             --------->ARR11(3)  --------->MYB59<---------ARR11(3)  ------         --------->YAB1          ---------->DOF2---------->DOF2    --------->TOE2(3)           ------   agttcaaacaattatattaaaacagaactcagaaataaagaagataatcaaaaagggtatgtttggttacctttgaagacctcttccatagtcatggaag  25948200                                                <---------ANAC58                                                <---------ANAC55(2)                                                <---------ANAC46                                                <---------ANAC58                                                --------->ANAC55(2)                                                --------->O2 <---------ANAC58                                                <---------TGA1a                                                <---------O2 <---------ANAC58                                                <---------bZIP60(1)                                                =========================bZIP_DOF                                                --------->bZIP60(1)                                                --------->TGA1a                 --------->ANAC58 -------->RAV1(1)           ------->GAMYB      ----------->STF1   <---------ANAC46 --->ANAC58                 ==============================MYC_MYB <---------ANAC58<---------ICU4 --->ANAC58           --------->HSFB2a(2)    ----------->HVH21    <---------ANAC58<---------AtLEC2 --->ANAC46        ------>ZmHOX2a(1)        <---------WOX13(1)<----------DOF2   --------->ANAC58   caacaagaacacgagtctctccttcgataacaccctgaacaagctcattgacgtgattcgagtgcttatcgtgttgagacataagcatggcatacaacaa  25948300                 --------->ANAC46                                --------->ANAC46          ====================HOX2a_HOX2a                       <---------HSFB2a(2)         ---------          <------ZmHOX2a(2)                                     --------->HSFB2a(2)        <-------MYC2         <---------ARR14(2)                                --------->HSFB2a(1)             <-------MYC3         <---------ARR11(3)                                <---------HSFB2a(1)             ------->MYC3         --------->ARR14(2)                                <---------HSFC1(2)<---------ANAC46         --------->ARR11(3)                               ----------->ARR10  <---------ANAC58     <--        <------ZmHOX2a(1)                           --------->MYB52(1)    <---------CCA1(2)------->MYC2    --------->ALFIN1                        <------ZmHOX2a(1)   <---------LBD16   ------->TEIL    ---  <---------ANAC58            ----------->GT1      ---------->DOF2   --------->GLK1(1)--------->TOE1(1)  <---------ANAC58     <------ZmHOX2a(1)--------->At4g35610--------->HSFC1(2)<---------ANAC58     ---   gagagcgtgaggatcatcaacgcgaggaccgattgtgaaaacagcaggaataacaaagggaagtttctcggaactcatagcttgaacctcgaacgtgtag  25948400                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                -----                                                                                            ------>ZmHOX2a(2)                                                                                        ----------->HVH21                                                                                       <-----------HVH21                                                                                       <---------MYB52(1)                                                                                      --------->LBD16                                                                                   --------->MYB52(1)                                                                                  --------->DEAR3(1)   --------->LBD16                                                                --------->AtMYB61 <---------LBD16                                                                  <---------ALFIN1<-- >ALFIN1 <---------HSFC1(2)                --------->ANAC46                      <---------MYB55(2) -------ZAT14                              --------->ANAC58 --------->ANAC58     --------->MYB46(3) ------>ZAT14                      --------->AtLEC2   <----------DOF2          --------->ANAC46 ----- ------>ZAT18      <---------DEAR3(1)      --------->ANAC58 --------->ANAC58 ------>ZmHOX2a(2)  -----   ttcaccggagaaacgtcgaagacggtgcaagactgccatggaaacacccaagacttctttgcaagcttgatgtctgtgatcccaccaccggtgatcgcaa  25948500          <----------DOF2 --------->TOE1(2) -------ARR14(2) -------ARR11(3) ------>ARR11(3) ------>ARR14(2)                                        <---------TOE1(3) ---->ANAC58                                            <---------TOE2(3) -------GLK1(2)                               <---------ANAC46                      --------->HSFB2a(2) ------>ARR10                                 <---------ANAC58        --------->CCA1(2) ---->ANAC58      --------->GLK1(2)           <---------ANAC58     <---------TOE2(3)<---------HSFB2a(2)   gatactgcgatgctttagcgactctgtaactcattctttcttcgtcttccttgaaattagggttttgttgagatttagggatttttctagtacaagtttg  25948600                                                                                      <---------GLK1(2)                                                                                    <---------AHL20(1)                                                                                    --------->AHL20(1)           --------->YAB1                                        --------->AHL20(2) <---------ARR11(3)          ==================HOX2a_HOX2a                         ------------------------>ANAC81          <------ZmHOX2a(2)                                     --------->AHL20(2)  --------->ARR11(3)          *TSS   ---------->DOF2                               ------------------------>ANAC81         <---------ARR11(3)                               --------->AHL20(2)     --------->AHL20(2)         --------->ARR11(3)                              --------->AHL20(2)--------->AHL20(2)        <------ZmHOX2a(1)         <-----------GT1  ----------->GT1        --------->AHL20(2)        <    <---------ANAC46 <------ZmHOX2a(1)             --------->ANAC46   --------->AHL20(2)            <   tttgtggagaggatcataagaaaggatttaacttatatacaagtttttaatacgcgtaaataaaaaataaaaaaaaataaaaaaaaaatattctcttgaa  25948700                                                  --------->MYB52(2)                                   --------->ATHB12                           --------->ANAC58    --------->At5g28300                           --------->ANAC58    <-------GAMYB                                       --             <----------DOF2      <---------AHL20(2) <-----------GT1                             <---   <----------DOF2         --------->ANAC46   ----------->GT1                                    ---- ---------TOE2(3)    <----------DOF2        <---------LBD16 --------->GLK1(2)                -------- ---------TOE1(3) <-----------GT1 <---------YAB1<---------MYB52(1)                      ----------->GT1   ttaagcttttatattcttttctactttctacgaaatttcattgaaacgcggttatttacaaaattctataactgttttggctaaatttgaatgttaaaag  25948800                                                                           --------->YAB1                                                           <---------AHL20(2)                                                           --------->AHL20(2)      <---------WOX13(1)                                  <---------AHL20(1)   <---------AHL20(2)                                     --------->AHL20(2)   <---------YAB1                              <---------ARR11(3)          -------->HAHB4  <---------AHL20(1)                           --------->ARR11(3)         --------->ICU4  --------->AHL20(1)                           <---------ARR14(2)         ----------->GT1  --------->AHL20(2)                       <-------TEIL   --------->AHL20(1)          <-------TEIL  <---------AHL20(2)        --------->ARR11(3) --------->ARR14(2)         <---------YAB1 ------->AHL20(2)           <---------ARR11(3)<---------CCA1(2)      --------->ANAC55(2) ------ARR11(3)            <---------GLK1(1)--------->ANAC55(2)--------->AHL20(2)    --------->AtLEC2 ----->ARR11(3)      <---------ANAC46  <---------YAB1     <---------AHL20(2) <---------YAB1 -->DOF2--------->YAB1     --------->GLK1(1)<---------ANAC55(2)<---------AHL20(2) <-------TEIL <-----   ataatataattgataacaaaattatgtggaaatcttgtattttgatacatatctacataatttatttttttatgtaatgataaatacatgcatatttttt  25948900                                                                       ----------->HVH21                                                                      ------->MYC3                                                                      <-------MYC2                                                                      <-------MYC3                                                                     --------->ANAC55(2)                                                                     <---------ANAC55(2)                                                                     <---------O2                                                                     --------->ANAC46                                                                     --------->TGA1a                                                                     <---------TGA1a            -----                                                                     --------->O2         <---------ANAC58                                                                 --------->CCA1(2)        <---------ANAC58                                      <---------AHL20(2)        <---------ARR14(2)        <---------ANAC46                                      --------->AHL20(2)     <---------ANAC46         --------->HSFC1(2)                                     <---------AHL20(2)--------->ARR11(3)             --------->HSFB2a(1)                                <---------DAG2         <---------AHL20(2)             <---------HSFC1(2)                                ===============================================bZIP_DOF   <---------LBD16                             <-----------GT1           <---------AHL20(1)             <---------HSFB2a(1)                          <----------DOF2           --------->YAB1<-------TEIL      <---------ARR11(3)                      <---------CCA1(2)       --------->ANAC58  --------->ARR14(2)--------->ANAC58      --------->ARR11(3)  --------->TOE2(3)   --------->ANAC58<---------MYB46(3)  --------->ANAC58 ----YAB1         <---------YAB1<----------DOF2     --------->AHL20(2)------->MYC2--------->ANAC46 --   atagtttagatgttgtttttatgtttatctttaactttatttatttgtaagctataatatatggtggatacacgtgaaacatccaagaaatttcgggcat  25949000                                                   --------->AHL20(1)                                                   <---------AHL20(1)                                                --------->AHL20(2)                                             --------->LBD16                                            <---------HSFB2a(2)                                        <---------ANAC58                                   <---------AHL20(2)                                 <-----------GT1     ----------->RAV1(1)          --------->AHL20(1)  <---------YAB1  <---------TOE1(3)    --------->ANAC46              --------->AHL20(2) --------->AHL20(1)         <---------AHL20(2)  <-----------GT1           ----------->GT1 --------->HSFB2a(2)       <---------TOE2(3) ------>GT1          --------->AHL20(2) <---------ANAC58         <---------AHL20(2) <---------AHL20(2) ----->TEIL   ----------->GT1     <---------AHL20(2) --------->AHL20(2)        <---------AHL20(2) <--   gtatatacaacatagcatgtaaattcaatatggaaatttaatgcttccgaaaaaatattatagctatatttttaggttttttttattttaactactgaat  25949100  Previous    Next  AGI:  At5g64870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25250.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25260.1); similar to 80C09_16 [Brassica rapa subsp. pekinensis] (GB:AAZ41827.1); contains domain PTHR13806:SF3 (PTHR13806:SF3); contains domain PTHR13806 (PTHR13806) Range:  from: 25946764    to: 25948610    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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