Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------YAB1                     <---------MYB46(3)                  <---------ANAC46                                                            -------                  <---------ANAC58                                                          <--------           --------->ANAC55(2)                                                              ---------           <---------ANAC55(2)              ------->TEIL             <-----------HVH21    <---------AHL20(2)      ----------->GT1----------->GT1    ------->TEIL                <------MYB83         --------->AHL20(2) ---------->DOF2  <---------ANAC58  <---------TOE2(3)     <-------TEIL--------->ZAT18 --------->CCA1(2) ------>YAB1 <---------ICU4       <---------AHL20(2) <---------YAB1 <------MYB46(1)  <---------ARR11(3)   taataaaggagttacttatttcgtggttataaatgtttaatgtatgtatattgctatgagtacattttgtaggtcactgactcactagatataaaatctt  25927100                --------->DAG2               ---------->DOF2                                               ------>ZmHOX2a(1)        --------->AHL20(2)                                                  --------->TOE2(3)        <---------AHL20(2)                                      ------>ZmHOX2a(2)   <---------ARR14(2)                         <---------MYB46(3)====================HOX2a_HOX2a   --------->ARR14(2) <---------ZAT6        <-------GAMYB      =====================HOX2a_HOX2a   --- -->TOE2(3) --------->AHL20(2)         ----------->HVH21       <------ZmHOX2a(2)   --------->ATHB12-- -ARR11(3)  <---------AHL20(2)        <-----------HVH21        --------->At4g35610<---------AHL20(2) >ARR11(3)<---------------AGL15<---------AHL20(2)        --------->TOE1(2)<---------ATHB12      -----   aagcgtatatttatttaaaaagtagtgttgaatttttttgggtcacggttgtccaaaatactgcgatctgaatccaatccttatttgattagactcaaga  25927200                                                ----------->RAV1(1)                                               --------->DREB2C(2) <-----------HVH21                                              --------->DEAR3(2)  <---------ANAC58    --------->LBD16                                         <---------YAB1           <---------ANAC58   <---------LBD16                    <---------ANAC58   --------->ATHB51       ---------->DOF2        <---------ANAC46                    <---------ANAC55(1)<--------HAHB4      --------->ANAC58         <---------LBD16                    <---------ANAC46   <---------ICU4      --------->ANAC46   >>>>>>>>>ARR1 ------>ICU4--------->TOE2(3)         <---------YAB1       --------->ANAC58   >>>>>>>>>ARR2 ------->ATHB12     <---------ANAC58  --------->ICU4  ----------->HVH21     <---------YAB1      ----- ---->YAB1  --------->TOE1(3)   <---------CCA1(2)     --------->WRKY12      <---------TOE2(3) <------   atgatttagaaaaacctgaattacttgtattcttatatccattattaaaccgacatttgacccgaaatgcgtcagactaagattgtaccgggaaggaaat  25927300                                                                                                <----                                                                 <---------At4g35610            -----                                                               <---------WRKY12                 <----     --------->ANAC58                      <---------ANAC46    <---------WRKY38(1)       --------->At5g28300     --------->ANAC58             <---------ZAT2             <-----------HVH21           <---------MYB52(1)     --------->ANAC46             <---------At4g35610  <---------DOF5.7(2)              --------->LBD16    --------->DAG2                --------->ZAT2      <---------WRKY38(1)               ----------->GT1   ---------->DOF2           ----------->HVH21        <---------WRKY12                <---------ANAC46 ------>GT1        ---------->DOF2--------->At4g35610--------->DOF5.7(2)            <-----------GT1 ---GLK1(1) ----------->GT1 <-----------HVH21       <-----------HVH21            <---------MYB46(3)   gtgaaaaaagcaacttgtaaaaaaagcctgtgtgacagctctgtaacttgtaagcgtcaacgaggtcaactgtttcggtttagttgttaccggtaatttg  25927400                                              <---------MYB52(1)                                             <-------GAMYB                                            <---------ANAC58                                            <---------ANAC46                                            <---------ANAC58                                        <---------ANAC58                                        <---------ANAC58                                       <-----------RAV1(1)           <------ZmHOX2a(2)                                       <---------AtMYB61         --------->DEAR3(2)                                    --------->ARR14(2)         <---------ARR14(2)                                    <---------ARR14(2)      --------->HSFB2a(2)                                <---------LBD16<---------ANAC46--------->ARR14(2)                   -  <---------YAB1                ------>ZmHOX2a(2)     <---------GLK1(2)                             - --MYB83                       --------->ARR14(1)     <------------CBF------>ZmHOX2a(2)         ----- ------>GT1     ------>ZmHOX2a(2) --------->LBD16<---------ANAC46--------->MYB46(3)      --------->MYB46(3) --MYB46(1) <---------YAB1  <---------YAB1 <-------TEIL     <---------HSFB2a(2)   <---------DAG2-----   gtttataatggattttgatcggtgtgatttatgatccggttttggtgcgttgtgtagattgtcccgaaccgatctcatcttctacctttcaacaacttaa  25927500                                                                                            <--------                                                                                        ------>ZmHOX2a(2)                                                                                      --------->ARR11(3)                                                                               ------>ZmHOX2a(2)                                                                              --------->GLK1(1)    --     *TSS                       ------>NtERF2                                 <---------GLK1(1)   --- -------->ANAC58                --------->LBD16         --------->AHL20(2)   --------->ARR11(3)   <-- -------->ANAC58    <---------ARR14(2)        --------->ZAT6                 <---------ARR11(3)   <-- ---->ANAC58        --------->ARR14(2)  --------->TOE2(3)                    <---------AGP1 --------- ---->ANAC58       <---------CCA1(2) <---------CCA1(2)----------->GT1       <---------CCA1(2)<------ZmHOX2a(2)   gcaaggaaacgaagtcgtttcatatctgttcttccgcccaaatctcaaacactagtaagtaaattcgaagggagtcttggatctctctgatctcgatcca  25927600                                                                                                    -                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                           --------->ALFIN1 -ARR14(2)                                                                             <------ZmHOX2a(1) ------->GLK1(2)                                <---------AHL20(2) ------->TEIL        ============== ------>ARR14(2)                     --------->ARR14(2)    <------ZmHOX2a(1)           ============== -------ARR14(2)                     ------->TEIL    <---------HSFB2a(2)        --------->ATHB12 ---- -------GLK1(2)                      <---------ARR14(2) <------ZmHOX2a(1)     <---------WOX13(1) <--- >ARR14(2)     <---------CCA1(2)    <---------CCA1(2)--------->HSFB2a(2)    --------->ATHB12    -----   gattctctctacttctcttatcttcgatagagaaatttgtatcttcagatttattcgaggaggaagacgaaccctacttgattgatttaggaggtggaga  25927700                                                                    <---------ANAC46                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                <---------At4g35610                                                             <------ZmHOX2a(2)                                             <---------TOE2(2)  --------->At4g35610                                             <---------TOE1(2) <-----------RAV1(1)                                            ------>ZmHOX2a(1)--------->CCA1(2)                                            ========================HOX2a_HOX2a <----------DOF2                       <---------GLK1(1)    <---------ARR11(3) ----->ZmHOX2a(2)                  ------>ZmHOX2a(2)        --------->ARR11(3) -----ZmHOX2a(2)                  <---------At4g35610       <---------ARR14(2) -------ARR11(3)                  --------->At4g35610       --------->ARR14(2) ------>AGP1                     <---------AGP1            <---------CCA1(2)                    <---- ------>ARR11(3)              <---------WOX13(1)          ----------->ARR10                     <---- =====HOX2a_HOX2a        <------MYB46(1)    =========================HOX2a_HOX2a               <----- ======HOX2a_HOX2a       <------MYB83  --------->GLK1(1)--------->LBD16                        <----- ----->GLK1(1)         <---------MYB52(1)  --------->TOE2(2)--------->AGP1                  <-------- ------GLK1(1)        <-------GAMYB================HOX2a_HOX2a------>ZmHOX2a(2)         <---------ARR14(2) ------>ARR10        <-----------RAV1(1)   --------->TOE1(2)<---------AGP1              --------->ARR14(2)   gatctttctgaacaagtttgattctgttggtaattgatctgaaatcctaggttttagccgtagatctgctgcttgtttcgatcgatttgggataccgtag  25927800                                                     --------->LBD16                                                    <---------HSFB2a(2)                                                    --------->HSFB2a(2)                                                    <---------ANAC46                                                   <---------LBD16                                                 --------->GLK1(2)                                                 <---------ARR14(2)                                       --------->At4g35610                            <---------ANAC58                                      <---------ARR14(2)                              <---------ANAC58                                      --------->ARR14(2)                         <---------MYB46(3)                                      <-----------ARR10   <---------RVE1(1)    <---------ANAC58 --------->ICU4                       --------->GLK1(2)  --------->ARR11(3)    <---------ANAC58 --MYB46(1)                   ----------->GT1    --------->ARR14(2)         <---------ZAT18 --MYB83                      <------MYB83      <---------GLK1(2)<---------MYB52(1)   <---------ANAC46 ----TOE1(2)               <------ZmHOX2a(1)    --------->ARR14(2)         <---------ANAC46 ----TOE2(2)<---------GLK1(2) <------MYB46(1)   <---------ARR14(2)         <---------ANAC58 -ANAC46--------------------->WRI1   <---------GLK1(2)   <---------ARR11(3)<---------ANAC58    <-----   gtattgattccatagaatttctcgctcgaggaaggtgaagaatctgcccagattccggagatttttagttagtcttggtgtgcttgttgcttcggtaatg  25927900                                                                   --------->HSFB2a(2)                                                                   <---------HSFB2a(2)                                                             --------------->AGL15                                                             <---------------AGL15                                   <--------P           <---------ZAT2       ---------->DOF2            <-------GAMYB         <---------HSFB2a(1)     <---------YAB1              <---------MYB46(3)     --------->HSFB2a(1)   --------->YAB1               <---------TOE1(2)       <---------At4g35610  ==============================HOX2a_HOX2a             --------->At4g35610  <------ZmHOX2a(2)             <---------TOE2(2)       --------->HSFC1(2) --------->ARR11(3)       <---------ARR14(2)            <---------HSFC1(2)        --------->GLK1(2) <---------ARR11(3)       --------->ARR14(2)       <---------HSFB2a(2)            <---------ARR14(2) ----ZAT6                <------ZmHOX2a(1)         --------->HSFB2a(2)           <---------GLK1(2)  -   ttagatcataaaagtcttccattgtgaggaatcggaggttgctaagagtgtttgtggaagctgcttcttctggtattggattagaatcgggactatggaa  25928000  Previous    Next  AGI:  At5g64810.1    Description:  WRKY51 (WRKY DNA-binding protein 51); transcription factor. Identical to Probable WRKY transcription factor 51 (WRKY51) [Arabidopsis Thaliana] (GB:Q93WU9;GB:Q9LV96); similar to WRKY50 (WRKY DNA-binding protein 50), transcription factor [Arabidopsis thaliana] (TAIR:AT5G26170.1); similar to 80C09_12 [Brassica rapa subsp. pekinensis] (GB:AAZ41823.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 25925639    to: 25927029    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g64813.1    Description:  LIP1 (LIGHT INSENSITIVE PERIOD1); GTPase. Identical to Uncharacterized GTP-binding protein At5g64813 [Arabidopsis Thaliana] (GB:Q9C5J9;GB:Q9LV96); similar to ATP binding / GTP binding / transcription factor binding [Arabidopsis thaliana] (TAIR:AT5G09910.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80534.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Miro-like; (InterPro:IPR013684) Range:  from: 25927505    to: 25930122    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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