Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->TOE2(3)    ------>MYB83    ------>MYB46(1)   ----------->RAV1(1)  --------->AtMYB61  ------->GAMYB--------->ANAC46 <---------MYB52(2) <---------MYB55(2) --------->MYB46(3) -------->ANAC58 -------->ANAC58 ------->WOX13(1) -------WRKY38(1)                                                      ---------->DOF2 ----->WRKY18(1)                                                 --------->ANAC58               <---- --ARR11(3)    --------->ANAC58                                  --------->ANAC58    --------->CCA1(2) ->ARR11(3)    --------->ANAC58           <---------YAB1       ---------->DOF2    ----------->GT1----   tcaaccaacatcaaaacaagcaacgagaagaaaacttttcaactatgtttctatctatcgaacccagaagccaaaaatcgaaactggatataaaacaagg  25919000                                   <---------LBD16                                <-------TEIL                                     --------->At4g35610                                --------->WRKY38(1)                     <-------MYC3                           ------>NtERF2                 <---------MYB46(3)      <---------ZAT2                          ----------->HVH21              <------MYB83   ------->MYC3                         --------->LBD16      --------->ANAC58          <-------MYC2                        --------->ANAC55(2)   --------->ANAC58       <---------ANAC46                        <---------ANAC55(2) ---------->DOF2          <---------ANAC58           --------->At4g35610 --------->DOF5.7(2)       <------MYB46(1)------->MYC2           <---------ZAT14--------->ANAC46 <------ZmHOX2a(1)   <-------TEIL      --------->ZAT2           <---------At4g35610 <-----------HVH21 --------->CCA1(2)   <---------ANAC58 -------HVH21          <---------LBD16 <---------ANAC46 <---------DEAR3(1)       <---------At4g35610 ----->WRKY18(1)   --------->AtMYB61--------->DEAR3(1)  <---------AtMYB61   <---------ZAT14       ---   tcaagagagagagagcagagaccattccgcgacgttcaccggcgaggaaagaaacgcgttggtgattcatggcatgtgtatagagctgcgagagcgaatt  25919100                <------NtERF2               ------>NtERF2                                       <-----------ARR10              --------->ANAC58                              <---------GLK1(1)              --------->ANAC46                             --------->ARR14(2)              --------->ANAC58                             <---------GLK1(2)          ---------->DOF2                                  <---------ARR14(2)       --------->ANAC58                            --------->ARR14(2)<---------ANAC58       --------->ANAC58                            <---------ARR14(2)<---------ANAC58   ------>NtERF2<-----------------AGL3         --------->LBD16  <---------ANAC58            ---------  --------->DEAR3(1)                           ------>NtERF2--------->GLK1(1)               ------->TEIL <---------At4g35610                --------->TOE2(3)  <---------LBD16   ----------------->AGL1 --------->At4g35610              ------->TEIL--------->DEAR3(1)<---------ANAC58           <---------ARR14(1) --------->DEAR4(2)               -------->P  <---------ANAC46<-----------GT1              <---------GLK1(2) ------>At4g35610              <------ZmHOX2a(2) --------->REM1(2)<---------MYB52(1)  <---------SPL7   agcagcgcctcgaaacgcgccatacatggttcgatcaacctcatcgagccgcgtagcctcggattttcgtttcttccccattagagtccgaacgaatctc  25919200                                                                                --------->ATHB12                                                                              <---------DAG2                                                                              --------------->AGL15                                                                              --------->TOE2(3)                                                                              <----------DOF2                                                                             ----------------->AG                                                                             ========================                                                                        <---------ICU4                                     ----------->GT1                    --------->ATHB12        >>>>>                              <-----------GT1                        <------ZmHOX2a(1)     ----------                         --------->ARR11(3)                    >>>>>>>>>TBF1 ----------------->AGL1>> >GLK1(2)                <---------ARR11(3)             ---------->DOF2<---------YAB1 <---------REM1(1)   acaaaccctagaaatagaattgtccaagttcttaacaatttgtaatttagggattttagaaagaagaagaaggattattgccttattggtgaagggaaga  25919300                                                   <----------DOF2                                                  <---------ANAC46                                                  <---------ANAC58                                                  <---------ANAC58                                              <-------PIF5                                              ------->MYC4                                              <-------MYC2                                              ------->PIF5                                              ------->MYC2                                              <-------MYC4                                              ------->MYC3                                              <-------MYC3                                             <---------PIF3(3)                                             --------->PIF3(3)                                             --------->O2                                             =================bZIP_DOF                                             <---------TGA1a                                             =================bZIP_DOF                                             <---------bZIP60(2)                 >>>>>>>>>RAP2.2                                             --------->bZIP60(2)               <---------ARR11(3)   -                                             --------->TGA1a                <---------CCA1(2)    <---                                             <---------O2              <---------TCP15(1)       <----                                           <---------ALFIN1            <---------TCP20         ------                                         <----------------PIF3(2)      --------->PCF2         <------                                     --------->GLK1(2)                <-----------HVH21       -------     >>>>>>>>>TBF1                   <---------ARR14(2)            <---------TOE1(3)          <------  >>>>>>>>>TBF1                      --------->ARR14(2)            <---------TOE2(3)         <------- =============================================================================MADS_MADS  --------->TOE1(2) >>>>TBF1                     <---------ZAT14<<<<<<<<<<HY5    <----------DOF2 <---------CCA1(2)------ -------------->ANAC81        --------->ZAT14>>>>>>>>>>HY5    <---------------AGL15      --------->TOE2(2) >>>>>>>TBF1   --------->ALFIN1     <---------GLK1(2)*TSS     --------------->AGL15     ----------->RAV1(2)   agaagaagaagaaagacttgtggcatttactctgtagagattctgccacgtggctttcatgctacttttaagggtcccatatatctaaaaacctgggccc  25919400                                                                                                 ----                                                                                                 <---                                                                                                 <---      <---------ANAC58                                                                           ----      <---------ANAC58                                                                           <--- <------------CBF                                                                             ------- -------->ATHB12                                                                            <-------- ------ALFIN1                                                 ------->TEIL                ----------- --NtERF2                                                  --------->ANAC46            --------->MYB52(1) --->TCP23                                                 --------->ANAC58            ------>MYB46(1) ---TCP20                                                  --------->ANAC58            ------>MYB83 -->PCF2                                                <---------WRKY38(1)          --------->AtMYB61 ---TCP15(1)                                            <---------WRKY12      --------->REM1(2) ----- --PCF2<----------DOF2                                  <---------WRKY45   <---------ANAC46--------->At5g28300 --->TCP15(2)                 <----------DOF2     <----------DOF2<---------AHL20(2)  <---------MYB59   cactattggctttgcagacaaaaattttgaagctttggactgttttttttttctttggtccacgaatttttttttttatgtgtagaaccaaaccgttaat  25919500      <---------ARR11(3)      <---------AGP1      --------->ARR14(2)      <---------ARR14(2)                                                     --------->YAB1      --------->ARR11(3)                                                   --------->AHL20(2) ----->AHL20(2)                                                            <---------YAB1 ------ICU4                                                                <---------AHL20(2) ------AHL20(2)                                                         <---------TOE2(3) ----->ATHB51                                                         --------->AHL20(2) -----ATHB1                                             <---------AHL20(2)--------->TOE2(3) -->YAB1------>ZmHOX2a(2)                    --------->ZAT14          <---------AHL20(2) -MYB52(1)     --------->YAB1                <---------ZAT14         --------->AHL20(2) >GT1<---------CCA1(2)           --------->ANAC55(2)    --------->AHL20(2)--------->YAB1 ---->ICU4    <---------ATHB12   <---------ANAC55(2)  <---------WOX13(1)<---------YAB1   aatttgtggatcttcaatgaaaatagtagctaatcacatattttgagttcagactgatttatataccaaaaattaatattaataaactgctatctcattg  25919600                                    --------->ATHB51                                    <---------ICU4                                    -------->ATHB1                                    <--------HAHB4                                    --------->AHL20(2)                                    --------->YAB1                                   <---------ATHB12                                   --------->ICU4 <-----------GT1                                   <---------ATHB51                                         ---------                     --------->ANAC58            --------->ARR14(2)                     --------->LBD16                     --------->ANAC58    <---------At5g28300                  --------->MYB52(1)    <  <---------TOE2(3)  --------->ANAC46 <---------YAB1                        <---------MYB52(2)      -   tttcaaggatgtattcgtttaataagcaattcgaccaattattaacagcgatatactctcttaaccaaaaaaaaaaaaactaactgattccgaaaaaaat  25919700                                             <---------AHL20(2)                                         <---------AHL20(2)                           --------------->AGL15                           <---------------AGL15         <-----------GT1                           <---------HSFB2a(2)          --------->AHL20(2)                           --------->HSFB2a(2)          <---------AHL20(2)                          ----------------->AGL3  --------->TOE1(3)                          <-----------------AGL2  --------->TOE2(3)                                <-               ----------->GT1           --------->AHL20(2)               --------->TOE2(3)        --             <---------ANAC58           --------->AHL20(1)                <---------MYB59         ---             <---------ANAC46           <---------AHL20(1)                --------->TOE1(3)     -----      <----------DOF2     ----------------->AGL2<---------TOE1(3)      ------->GAMYB           ------ >AHL20(2)   <---------ANAC58           --------->AHL20(2)            --------->MYB46(3)       <----- ---------ALFIN1          <-----------------AGL3<---------TOE2(3)     <---------MYB111(2) --------->YAB1 -------->ANAC46    --------->ICU4      <---------AHL20(2)      --------->ZAT6         ------>ZmHOX2a(1)   acacacctctttgtagcttgtaattctttctaaaaatagaaatttattttaagcttaattaatctttcactaacaacctaaaaacattcctattacaacg  25919800          --------->ANAC46          --------->ANAC58     --------->ANAC58     --------->ANAC46     --------->ANAC58  --------->MYB46(3) --------->ANAC46 --------->ANAC58 ------>MYB46(1) --------->ANAC58 ------>MYB83                        ----------->GT1                                                - --------ALFIN1             ------>MYB83                                                            - ------->AtMYB61         --------->DEAR3(2)               ---------->DOF2                 <------ZmHOX2a(2) ------>MYB46(3)        <---------At5g28300       -------->P ------------------------>ANAC81   <----- -->GAMYB --------->ANAC58  ------>MYB46(1)   --------->TOE2(3)---------->DOF2           <---------ARR11(3) --->MYB46(3)          <-----------GT1        ------------------------>ANAC81         --------->HSFB2a(2) ----MYB52(2) ---------->DOF2       >>>>>>>>>TBF1--------->WOX13(1)*TSS               <---------HSFB2a(2)   accacccaagacacgaaaaagaattttaccgactggaagaagaaaaaacatcaaccagacaaaagaaaagaaaacaaaaacacatcttcgagatcaaaca  25919900  Previous    Next  AGI:  At5g64780.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G09830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71731.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64859.1); contains InterPro domain Uncharacterised conserved protein UCP009193 (InterPro:IPR016549) Range:  from: 25917785    to: 25919353    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g64790.1    Description:  glycosyl hydrolase family 17 protein. similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G64760.1); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G64760.2); similar to 80C09_11 [Brassica rapa subsp. pekinensis] (GB:AAZ41822.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 25919867    to: 25921927    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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