Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------ANAC58           --------->WOX13(1)                           <---------ANAC58        --------->ARR14(2)                      <---------ANAC46                       <----------DOF2             <---------ARR14(2)                      <---------                --------->ARR14(2)                <---------CCA1(2) <---------ICU4    <---------ANAC58                <---------ARR14(2)         <---------YAB1 --------->WOX13(1)          <---------ANAC58             <---------ANAC58             --------->AHL20(2)  --------->WOX13(1)<---------ALFIN1  <--             <---------ANAC58            --------->YAB1 <---------ATHB12      ------>ZmHOX2a(1)  <---   tgtttattagcgattgtgtatcggtcttttcttgttcgcagaattataatccatatccatcaatccatcaacatcacttcctccaccttcgtgccttatt  25915000                                                               <---------ANAC58                                                               <---------ANAC58                                                               <---------ANAC46                                <---------ANAC58           <---------At4g35610                                <---------ANAC58           --------->At4g35610                         --------->MYB46(3)          <---------HSFB2a(2)                        --------->ANAC58             --------->HSFB2a(2) -DOF2                  --------->ANAC58   ------>ZmHOX2a(1)  <-------TEIL  --------->YAB1 ---------GT1         --------->MYB46(3)  <---------ANAC58 <---------HSFC1(2)        --------->AHL20(2) --------GT1        --------->ANAC46      <---------ANAC58 --------->HSFC1(2)    ----------->GT1<----   ttccgactctcttgactcttctccacaaccaatagcgttctattccttactacttctcgtaagcttcgtgctaaaaaatcaaaatgtttatatatcaaga  25915100               <---------AHL20(2)              <---------AHL20(1)              --------->AHL20(1)                                                                   <-              <---------ARR11(3)                                                               <-----              --------->ARR11(3)                                                          --------->ALFIN1              <---------AHL20(2)                                                        <---------ANAC46        ----------->GT1                                          <---------------AGL15  --------->At4g35610   --------->ATHB12                                              ====================================   --------->ATHB51                                              --------------->AGL15  <---------At4g35610   <---------ICU4              ------->GAMYB                  <---------YAB1            =============  <---------YAB1              --------->MYB46(3)            --------->YAB1              <---------TGA1a  --------->ICU4    <---------YAB1                   --------->AtLEC2               <-----------HVH21 -----ARR11(3)--------->AHL20(2)                  <-------TEIL<-----------GT1 <---------GLK1(2)------   actcattattgggtaatatattttgatattcaaccaaaaaacaagaagaagattcattcaaattatacttgatatagctagaaactcgtgaggtgagcgc  25915200             --------->AHL20(1)             <---------AHL20(1)            <---------AHL20(2)  <---------ANAC46                       <------ZmHOX2a(1)                    <------ZmHOX2a(1)    <-  <---------ANAC58              =====================================================================  <---------ANAC58              --------------->AGL15                     <---------ANAC46      ----- ---------DOF2           <---------AHL20(2)                               <---------O2          ----- ----ZAT18--------->AHL20(2)  <---------At5g28300                      <----------ID1        -------- ===============================================MADS_MADS              ----------->HVH21     <------- =========bZIP_DOF      --------->AHL20(2)                           --------->ALFIN1   <---------ANAC46 --->ZAT18<---------AHL20(2) <-----------GT1  <------ZmHOX2a(1)   <-----------------------TaNAC69(2)   gcttgtgtgtatatatatattagctataaatttaccttgagtaggagaggaaatgaagagtatgagaagaagtgcgacgaggaaagacttgtgggaaacc  25915300       --------->ICU4     --------------->AGL15     <---------------AGL15    ----------------->AGL2    <-----------------AG    ----------------->AGL3    <-----------------AGL2    ----------------->AG    ----------------->AGL1    <-----------------AGL3    <-----------------AGL1                                    <----------DOF2 <---------WOX13(1)                                          <---------DAG2 --------ICU4                                              ------->TEIL ====================MADS_MADS                    *TSS --------------->AtSPL8 ---->TOE2(3)                                  --------->ARR11(3) ---->TOE1(3)                    ----------->GT1  <----------DOF2       --------->AHL20(2) ->GLK1(1) --------->HSFB2a(2)--------------------->WRI1  <-----------GT1 <-----------TBP        ---- --GLK1(1) <---------HSFB2a(2)<----------DOF2  <---------ARR11(3)       <-----------TBP         <----   ctaattgccatttttggaagagagttttttttctttggttatatagaattatcttttgttgaacctttttgtgtttatatatagagatgaatgattctat  25915400                                                                              <---------bZIP60(2)                                                                              --------->O2                                                                              <---------O2                                                                              <---------ANAC46                                          <---------HSFB2a(2)              ----------->HVH21                                          --------->HSFB2a(2)           <---------ARR14(2)                  <---------AHL20(2)<---------TOE2(3)                   --------->ARR14(2)                 --------->AHL20(2)--------->MYB52(1)                  <------ZmHOX2a(1) ----->YAB1 ----------------->AGL3 <-----------GT1<------------CBF   <---------TOE1(3)              - -----YAB1  ------------>CBF<------------CBF    --------->ARR11(3)   <---------TOE2(3)              <   gatcagtttatggtcccaattttatatcggaattgaataacgttttggaagttattgagacatatgggtctaaggatttgacgtcgatatttctctgtct  25915500                                                                                    <----------DOF2                                                                                --------->TGA1a                                                                     <---------AHL20(2)<---------YAB1                                                               --------->YAB1   --------->ANAC55(2)                                                            --------->YAB1      --------->O2                                                           --------->ICU4       <---------O2                                      <---------ANAC58  <---------AHL20(2)      <---------ANAC55(2)                                <---------TOE2(3)      --------->AHL20(2)       ===============bZIP_DOF                              --------->AHL20(2) --------->ANAC58  ----------------------->TaNAC69(2)                              <---------AHL20(2) --------->ANAC58<---------YAB1 =====================             ------->TEIL    --------->AHL20(2)===========================================bZIP_DOF ---------->RAV1(1)     --------->ANAC46       ---------->DOF2<---------YAB1 <---------ATHB12 ---------ALFIN1      --------->ANAC46<---------ANAC58 <---------AHL20(2)  --------->WOX13(1)   tcccacattaacatgaatctatccccacaaaattaatatttcttgtttgcaaagcaaataaatgatgataatttatgcaatcacgtcttttgaatgagaa  25915600                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                --------->YAB1                                                                             ----------->GT1                --------->TOE2(3)                                          --------->ZAT14      <----                --------->YAB1                                             <---------ZAT14     <-----        <-------GAMYB                                           --------->TOE2(3)  --------->YAB1  <- <---------GLK1(2)                                              --------->TOE1(3)  --------->AHL20(2) ===============MYC_MYB <-----------GT1        <---------AHL20(2)     --------------->AGL15 <--------   acagaatttcggttacaaacttaatttcacatttgtatatgtaagaaatttaaaccgaaacacataccttaacccagtttagtaataaaaaaattcagga  25915700                                                      <----------DOF2                                                  <-----------GT1                                             <---------ANAC58                                          <---------ATHB12                  <-------GAMYB       <------ZmHOX2a(2)          ---------->DOF2   <---------MYB52(2)  <-----------HVH21 -----ARR11(3)    --------->At4g35610--------->ARR11(3) -ZmHOX2a(1)--------->DAG2  --------->ANAC58 <---------ANAC58    <---------ANAC58  <---------ANAC46 ---------DOF2<-----------HVH21      <---------ARR11(3)  --------->YAB1            <---------ANAC58 -LBD16 --------->YAB1      --------->ANAC58 <---------bZIP60(2) <---------ANAC58  <---------ANAC58   actttggtaatcaaaaggtcggatgaaatcacgaacgaagatcaatgacttgtcacctttgataaatgcctgtttgtagttgatttcttgaaactatctc  25915800                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                       <------ZmHOX2a(2)                                                                                       ==============                                  ------>ZmHOX2a(1)   --------->GLK1(2)                ==============                             <----------DOF2          <-----------ARR10               <---------ARR11(3)                  <----------DOF2--------->TOE2(3)    <---------ARR11(3)    <---------AHL20(2)<------          <-----------GT1 <---------ALFIN1        <<<<<<<<<WRKY18           --------->AHL20(2)-------         <XXXXXXXXXXXXXXXXXXXXXMIR2936         ----------->GT1  <----------DOF2       --------->ARR11(3)   ttgaaaaacgtttttcttctctttctcaacactttcctcagttttcaaactgtcaaaatctaacttctttctatgtttttaaatacaagatcaatatata  25915900  Previous    Next  AGI:  At5g64770.1    Description:  similar to 80C09_10 [Brassica rapa subsp. pekinensis] (GB:AAZ41821.1) Range:  from: 25914593    to: 25915350    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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