Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------AHL20(2)                                <---------AHL20(1)                               <---------AHL20(2)                             --------->AHL20(2)      <---------ARR11(3)                            <---------AHL20(1)   --------->YAB1        <---------YAB1      --------->AHL20(1) ------>MYB83       <-----------GT1     --------->AHL20(2)  ------>MYB46(1)    <---------AHL20(2) --------->AHL20(2) <-----------GT1  <---------AHL20(2)--------->TOE1(3)--------->AHL20(2)                                  <---------ARR14(2) ------>YAB1        --------->TOE2(3)<---------AHL20(2)              ---------->DOF2   ----------->ARR10 -------AHL20(2)    <----------DOF2 --------->AHL20(2) ------>ZmHOX2a(2)          ---------->DOF2 ------>AHL20(2) <-----------GT1--------->AHL20(1)   --------->ARR11(3)        --------->AtLEC2   <--   ttatattattttcattttttaactttaaaatatatatatttaataaaccaaatatgatctaaactaaatctaaaaggctccatccaaagtagatttgatt  25897900         <---------AHL20(2)                     <---------AHL20(2)                             <-----     <---------AHL20(2)              --------->ANAC46                                          <-----    <---------AHL20(1)    <------ZmHOX2a(1)     --------->AHL20(2)                       ----------->GT1    <---------ARR11(3)   ----------->GT1     ------>MYB46(1)                            --------->DAG2    --------->AHL20(1)   <------MYB46(1)     ------>MYB83                   --------->ANAC58   ------ --------------->AGL15   <------MYB83------->GAMYB                          --------->ANAC58   <----- ---------GT1          <--------P <-----------GT1                  ----------->GT1    ---------->DOF2   ttactatatatttaaaacatgtatggtaggaaaatttaaccgaaaccaaattaaacacattttagggtgaagaaaatcacccaaaaaaaaaaggtgactt  25898000                                                                                           --------->MYB52(1)                                                                                          <---------AHL20(2)                                                                                         <---------YAB1                                                                                       --------->ATHB51                                                                                       <---------ICU4                                                                                       <--------HAHB4                                                                                       --------->YAB1                                                                                       <--------ATHB1                                                                                       -------->HAHB4                                                                                      <---------ATHB51                                                                                      --------->ICU4                                                                                    --------->YAB1     <-----------GT1  ---------->DOF2                                            --------->TOE2(3) ----DAG2           <---------MYB59     --------->AHL20(2)                      <---------ZAT6 -----DOF2    ---------->DOF2  <----------ID1                                   ----------->GT1 --------->AGL15  <---------ARR11(3)    <---------AHL20(2)         --------->ANAC55(2)--------->AHL20(2) ==================================================================================================== ----------AGL15  --------->ARR11(3)    --------->AHL20(1)         <---------ANAC55(2)<---------YAB1   ttttttgtaacaaaacaaaagacctaaagtttagagacaaaataaaatgttagggtgattcaatgcatcacataatacagtattgttaataattaatggc  25898100                                                                                                   <-                                                                                          --------->TCP23                                                                 <---------------------WRI1 <--------                                                        --------->ALFIN1                  --------->TCP15(2)                                                      <---------ANAC58                  <-----------HVH21    --------->YAB1                                    <---------ANAC46        ----------->GT1  <-----    <---------ICU4                                    <---------ANAC58   --------->ANAC46--------->PCF2   --------->ICU4                                   <---------ZAT14      --------->ANAC58<---------TCP20 --------->YAB1                                     --------->ZAT14      --------->ANAC58<---------TCP15(1) <---------ICU4                      <----------DOF2--------->ZAT18   <-------TEIL      <---------PCF2 ==========MADS_MADS    <-----------GT1            --------->ALFIN1  --------->CCA1(2)  --------->TCP15(1)   taataataatgtgtgtttggaagtttttactaatctcttctttacaacaacaagtggagtggaagagagagatacacacaaggtttaatgggtcccacat  25898200                                <-----------------AGL2                                <-----------------AGL3                             <------------------------ANAC81              --------->YAB1                            <---------AHL20(2)                           --------->AHL20(2)                           --------->AHL20(2)                            <---------AHL20(2)                --------->AHL20(2)                                <---------WOX13(1)                <---------AHL20(2)                              <---------ICU4              *TSS  <--               --------->AHL20(1)                  ---------->ID1<------------CBF   --------->ANAC46  <-----------GT1   <-----------GT1            <----------DOF2  --------->ATHB12    --------->ANAC58 ---------DOF2 <---------AHL20(1)          <---------ZAT18      --------->ATHB51    --------->ANAC58 -ALFIN1       <---------AHL20(2)      <-----------RAV1(1)     <---------YAB1<---------ICU4 <-------- ----GLK1(2)   --------->AHL20(2)<---------------AGL15------>ZmHOX2a(1)<----------DOF2     --------->AHL20(2)   tcttttacttctcaaaatttaattactaattttatctaattttggtgctctttttcctcatctacataattgcctttaattatctcacaccatttaacta  25898300                    <---------ANAC55(2)      <---------YAB1                    <---------ANAC46        <-----------GT1     <---------ANAC58                    --------->ANAC55(2)    --------->YAB1   <---------ANAC58                 ------>ZmHOX2a(1)      <----------DOF2  <---------TOE2(2)                 <---------SPL7<---------MYB59--------->YAB1<---------ANAC58    <---------GLK1(2)<<<<<<<<<<AtSR1   <---------DAG2    <---------TOE1(2)                  --------- -------ATHB12  <---------ANAC58    ------->GAMYB<---------ICU4 <---------ANAC58            --------- ---GT1         <---------ANAC58 <-----------GT1<---------YAB1  <---------ANAC46      --------->ANAC46   atcactgattctcttcttccttacgcgtttgtacttaacccccttttatcatcatttcgcaggcttgcgtctgtctctctctctctctccaccattgact  25898400                            <---------MYB52(1)                           <----------DOF2                           ------>ZmHOX2a(1)       <-----------HVH21                          --------->TOE2(3)       <----------DOF2                      --------->YAB1          --------->ZAT14                                     <--                     --------->HSFC1(2)       <---------ZAT14                                   -----                     <---------HSFC1(2)       <---------ZAT18                                   <----                     --------->HSFB2a(1)      --------->ZAT18                               ---------                     <---------HSFB2a(1)    <---------ZAT18                               ---------->DOF2 >WRKY38(1)     --------->HSFB2a(2)        <---------ANAC46                          ---------->DOF2 >WRKY12        <---------HSFB2a(2)  ----------->HVH21      <------ZmHOX2a(1)   ---------->DOF2------   ctctctctctctctcgctctggaatcatcctttatttctgtgactgtgtgcactttcagagaggagagagaggcccaaaaccaaaagaaaagaaaaggtt  25898500         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       ----------->RAV1(2)       --------->At4g35610       <---------At4g35610                                                    <-----------GT1       --------->ZAT2                                                   --------->AHL20(1) <---------ANAC58                                                       <---------AHL20(1) <---------ANAC58                                                      --------->YAB1 <---------ANAC46                                                      --------->AHL20(2) -------RAP2.6(2)                                                  <---------YAB1 ---->ALFIN1                                                       <---------AHL20(2) -----MYB46(3)                                                    <---------AHL20(2) >DAG2 <---------ZAT2           <-----------GT1          <----------DOF2<---------AHL20(2)    <------ --->ALFIN1   <---------ICU4 --------->ARR14(2)         <---------DAG2<---------YAB1  ---------->DOF2   gtggcttgcagctgaatcaataccatctccatatatacaatacaccttcactattcccccttttgtatttttattatatttttcccatcaaagtctgttt  25898600                                                                                  ----------->HVH21                                                                               ------>ZmHOX2a(2)                      <---------ANAC46                                        --------->GLK1(1)                      <---------ANAC58                                       <---------ARR14(2)                  <----------DOF2                                            --------->ARR11(3)                ------>NtERF2                                                <---------AGP1                <---------RAP2.6(3)                                          <---------ARR11(3)              <---------RAP2.6(2)                                            --------->ARR14(2)         <---------MYB52(1)                                              <---------LBD16        --------->LBD16                                        <----------DOF2<---------GLK1(1)      <---------LBD16 <---------ANAC58                    ------>ZmHOX2a(1) <---------CCA1(2)   ----- ---MYB52(1)  ---------->ID1            ---------->DOF2   ============================HOX2a_HOX2a  <-   ttttagactccggtttgccgctttgtgtgtgtgtgagagagagaaagagagctatctatcctctgatttatggtctctggatctctgacaatcgagttga  25898700                                                                                               <-----                                                                                              <------                                                                                             <-------                                                                                             <------MYB46(1)                                                                                             --------                                                                                             <-------                                                                                             <------MYB83                                                                                            <--------                                                      <---------At4g35610                  <---------ORA47(1)                                                      <---------ZAT2                     --------->MYB55(2)                ------>ZmHOX2a(1) ----------->GT1     --------->At4g35610                <---------MYB46(3)   <-----------GT1               ------>ZmHOX2a(2)   --------->MYB52(2)                 --------->ALFIN1   --------->YAB1           <---------ATHB12   <---------GLK1(2)                        <---------AtMYB61 ------>GT1     ========================HOX2a_HOX2a<---------MYB52(1)                  <---------MYB52(1) --------AHL20(2)   <----------DOF2    --------->GLK1(1)                           --------->MYB52(1)   gttaattacaacacattcctctctttctcaatcgatctgtgaaatccaagattgttagctgtgtctgttttcagacaaatatgaacaccggtggtcggtt  25898800  Previous    Next  AGI:  At5g64740.1    Description:  CESA6 (CELLULOSE SYNTHASE 6); transferase, transferring glycosyl groups. Identical to Cellulose synthase A catalytic subunit 6 [UDP-forming] (CESA6) [Arabidopsis Thaliana] (GB:Q94JQ6;GB:O65338;GB:Q9FGF9); similar to CESA9 (CELLULOSE SYNTHASE 9), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G21770.1); similar to CESA5 (CELLULOSE SYNTHASE 5), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G09870.1); similar to CESA2 (CELLULOSE SYNTHASE 2), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G39350.1); similar to cellulose synthase [Populus tremula Range:  from: 25898292    to: 25903920    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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