Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------WRKY12                                 <-------MYC3             <---------ANAC46                                 ------->MYC3           <---------ZAT14                                <---------O2            --------->ZAT14                                --------->O2            <---------ZAT18                           --------->ANAC58    <---------bZIP60(1)                           --------->ANAC58    <---------O2                     ------>MYB46(1)                           --------->ANAC46 --------->ANAC46                    ------>MYB83         --------->At4g35610    --------->TGA1a--------->O2                   <---------MYB59       < ------>TOE1(3)        <---------HSFB2a(2)<---------DOF5.7(2)    --------->MYB46(3)                 < -->TEIL <---------At4g35610    <---------TGA1a--------->bZIP60(1)<---------ALFIN1            ------>ZmHOX2a(1)   cctgaaaatggagcttaaatttgttcttgaagccacgtttgggtaaacgacgtcgtagtggagtctgaccaccttcgaaaccaaacttcatcgttcctct  25870800                                    <----------DOF2                                   --------->TOE2(3)             ----------->HVH21     --------->TOE1(3)                                                <            <-----------HVH21   <-----------GT1                                                    --    <-----------GT1      <---------At4g35610                <----------DOF2      --------->ANAC46  <- ----------DOF2        <---------HSFB2a(2)   --------->ANAC58                   <---------LBD16    -- ---------DAG2         --------->HSFB2a(2)   --------->ANAC58    ------>ZmHOX2a(1) <------NtERF2   <-   cgctttttgccccttgtgacctcttccagcagttttacctttaccagacccaatacctcttcctttcctcgtcttgagttttctcggcacattgtctctc  25870900                                                                                               <-----                                                                                             --------               --------->AHL20(2)                                                            --------     ---------->DOF2                                                                        ---------    --------->WRKY18(1)                      ---------->DOF2                               <------ZmHOX2a(1) ------>ZmHOX2a(2)                       <----------ID1                                 <------------ ------ZmHOX2a(2)                        --------->ANAC58                          ------>ZmHOX2a(2) ------->ARR11(3)                 <---------ANAC58               --------->ETT(1)  ===============HOX2a_HOX2a --------ARR14(2)                 <---------ANAC46   --------->ZAT2               ================HOX2a_HOX2a ------->ARR14(2)                 <---------ANAC58   <---------ZAT2               <------ZmHOX2a(2) --------ARR11(3)    ---------->DOF2     --------->ANAC58    <---------AtMYB61  <---------GLK1(1)   agatcgttcaagctcaataaactataagccctgattccttgaaacgacaaagccctgctcgtagaggtcggaatttgagtagagatcggagaaggacggc  25871000                        ------->TEIL       --------->ALFIN1 <---------ARR14(2) -NtERF2----------->GT1 --------->ARR14(2) ->ANAC58               --------->GLK1(2) ->ANAC58            <---------YAB1                                            ------>ZmHOX2a(2) >RAP2.6(3)        --------->YAB1  <---------LBD16                 --------->ICU4 ---AtSPL3        --------->ICU4  <---------ANAC46          <---------YAB1 <---------YAB1         <--   attgaagaagtggtgaagaaatgatgaatctgggtttcgcggtttgatgaaacgaagaattgatgagtgatgttgatatgatcgacaagagtcttcttct  25871100                                               ------>ZmHOX2a(1)                                           ------>ZmHOX2a(2)       <---------------AGL15                          --------->ARR11(3) ----------->RAV1(2)   --------------->AGL15                  <------ZmHOX2a(2)       --------->GLK1(1)       <-----------------AGL1                  ====================================HOX2a_HOX2a ----------------->AG              --------->LBD16             <------ZmHOX2a(2)       ----------------->AGL1             --------->ANAC55(2)          <---------GLK1(1)       <-----------------AGL2             <---------ANAC58            --------->ARR14(2)     <-----------GT1             <---------LBD16             --------->ARR11(3)    --------->KAN4(2)  <---------TOE2(3)             <---------ANAC58            --------->ARR14(3)   <---------KAN4(1)   <---------TOE1(3)             <---------ANAC46            <---------ARR14(2)   <---------ICU4  <----------DOF2 <------            <---------LBD16              <---------ARR11(3)  <---------YAB1  <---------ARR14(2) ---------GT1<---------ANAC55(2)        <---------GLK1(1) <---------YAB1 <---------LBD16      -------   taacatttcttcgttgcgggatcaagtagatttcgattttagagatctcctgatgaaattttgattattccattttggggatttagggtttatgagattt  25871200                                                                                           ----------                                                                                          ------>NtERF2                                                                                          --------->LBD16                                                                                         --------->ANAC46                                     <<<<<<<<<TBF1                                       ------->GAMYB                                <----------DOF2                                          --------->ANAC58                               <---------ANAC58                                          --------->ANAC58                               <---------ANAC58        ---------->DOF2       <---------ARR11(3)                           <------------CBF         <---------ANAC55(2)      --------->ARR11(3)    -- <---------ZAT14          <---------ICU4        <-----------HVH21<---------ICU4         <---------MYB55(2) --------->ZAT14          --------->ATHB12     <---------ZAT6    --------->ATHB51       --------->MYB46(3) ---GLK1(1)              <---------YAB1      <---------ZAT14    --------->ICU4  <----------DOF2  <--- -->GLK1(1)    *TSS --------->WOX13(1)       --------->ZAT14<-----------------AGL1   <---------ALFIN1   cagtgaagagctactgaatcatccatcaccattgctttcttcttcagtactgtcacttaaaggcccattatggcccaaatgtcttttccacccgccaatt  25871300                    --------->ZAT14                    --------->ZAT18          <---------ANAC46          <---------ANAC58                          <------------CBF          <---------ANAC58      --------->AHL20(1)<---------AHL20(2)         --------->DEAR3(1) <---------ZAT14    <---------ZAT14               --------->AHL20(2)      --------->DEAR3(1)     <--- --------->ZAT14    <---------ZAT18              --------->AHL20(2)--------->MYB59             <----- -->CBF  ---------->ID1         <---------AHL20(2)--------->AHL20(1)   <---------WRKY38(1)     ------ ------->ANAC46  <---------ANAC46    --------->AHL20(2)           *TSS <---------WRKY12       ------- --------GT1   <---------YAB1   --------->AHL20(2)<---------AHL20(1) <-----------HVH21      <--------   cactaaactatgtcgttttgagtgaacttcaaaataaaataaaacagagaaataaattgggaagggttttaggtcatcgccgaattgctatttctccggt  25871400                            --------->ANAC58                        <------NtERF2                       ------>NtERF2                      --------->At1g77200                      --------->RAP2.3(3)                      ----------->HVH21                      --------->DEAR3(1)                      --------->DREB2C(2)                     --------->ATERF1(1)                     --------->RRTF1(1)                     --------->DEAR3(2)                     --------->ORA47(2)                     --------->ERF1                     <------NtERF2                     --------->RAP2.3(1)                    --------->At4g35610                    --------->ABI4(1)                    ------>NtERF2                    <---------At4g35610                    <---------ATERF1(1)                   --------->RAP2.6(2)                   --------->DEAR3(1)                   --------->RAP2.3(3)                   <---------DEAR3(1)                   <---------ATERF1(2)                   --------->ATERF1(2)                   --------->RRTF1(3)                   --------->RAP2.3(2)                  --------->RAP2.3(1)                  --------->RAP2.6(1)                  --------->RRTF1(1)                  --------->ERF1                  --------->DEAR4(2)                  --------->ATERF1(1)                 <---------RAP2.3(1)                 --------->At4g35610                 --------->LBD16                 <---------ATERF1(1)  --------->GLK1(2)--------->RRTF1(2) <---------GLK1(2)--------->ORA47(2) ------DOF5.7(2) <---------At4g35610                                          <---------ANAC58 ----MYB52(1)    ------>NtERF2                                                <---------ANAC58 --->DOF5.7(2)  --------->ANAC46       <----------DOF2         --------->ARR14(2) -->LBD16      <---------LBD16     <----------DOF2 <----------DOF2         <---------GLK1(2)     <--- -LBD16    <----------DOF2  --------->ANAC58 <----------DOF2   <---------ARR14(2)     <-----------GT1   aacgattctctctcttttccgccgccgacgaagccatctttctttctctttagctttctcgttccgatttgcatccagtttcttgatttttctaactaat  25871500                    <---------ICU4                                           ---------->DOF2     ----                    --------->ATHB51                               --------->AHL20(2)          <-----                   <---------AHL20(2)                             <---------YAB1 --------->ARR11(3)    <----------DOF2<---------YAB1                         <----------DOF2  <<<<<<<<<MYB98     <------ ------AHL20(2)  --------->YAB1 >>>>>>>>>WRKY18      ---------->DOF2<---------AHL20(2)  <----------DOF2   ttatgtcttttgaagagatttataattgcgattttgacagagtttgagtttgttcaaaagctttgtttattatatatgttaaagctctcgctatatttaa  25871600                                                                                    --------->GLK1(1)                                                                               --------->LBD16        --------->HSFB2a(2)                      --------->At4g35610          --------->HSFB2a(2)       <-----------GT1                 <---------At4g35610                    <---------ANAC46 ----->ZAT6             ----------->GT1<---------ZAT2       --------->GLK1(1) <---------HSFB2a(2) ------GT1              <---------ANAC46         <---------At4g35610       <---------ARR14(2)      <- -----GT1         <---------TOE1(2)    --------->At4g35610  <---------GLK1(1)<---------LBD16    -----   cacttgttttctcgattttgcaggttttgtgaaatcgcgagagctgatttgagcagagatggatttcgatttcaaagtttccggagatttcatagtcagt  25871700  Previous    Next  AGI:  At5g64670.1    Description:  ribosomal protein L15 family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO68891.1); contains InterPro domain Ribosomal protein L15; (InterPro:IPR001196); contains InterPro domain Ribosomal protein L15, bacterial-type; (InterPro:IPR005749) Range:  from: 25869493    to: 25871215    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g64680.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO68707.1) Range:  from: 25871366    to: 25872710    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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