Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->GLK1(2)                                            --------->ARR11(3)                   --------->ARR14(2)                                            --------->ARR14(2)     ------>ZmHOX2a(1)                                                           <---------ARR14(2) --------->ARR14(2)<---------GLK1(2)                                      <----------DOF2 ---------GLK1(1)  <---------ARR14(2)                              <----------DOF2 ------>ZmHOX2a(2) -------->GLK1(1)----------->ARR10                             <---------CCA1(2) <---------ARR11(3) ->LBD16     --------->YAB1 --------->LBD16                  --------->YAB1   <---------HSFB2a(2)  -- -LBD16     <---------YAB1 --------->HSFB2a(2)              <------ZmHOX2a(2) --------->HSFB2a(2) ---   agaaatcctctgttatcatcagattctctcccgaatcgaacaatcttcgacaaaacctcgcgatcatctctttcttctttctcgatcttcactctatcga  25860300                        <------NtERF2                    <-----------HVH21                   --------->TGA1a                   <---------TGA1a                   --------->O2       ------>NtERF2              <---------CCA1(2)       --------->LBD16                           --------->ARR14(2)          ------>ZmHOX2a(2)  <---------At4g35610                                <---------ARR14(2)         <------ZmHOX2a(2)   --------->At4g35610                               ------>MYB46(1)        --------->ARR11(3)<---------ZAT2                                       <---------CCA1(2)        <---------ARR14(2)<---------At4g35610                         --------->GLK1(2)   <---------DEAR3(1) <---------DEAR3(1)--------->DEAR3(1)      --------->MYB52(1) --------------------->TaNAC69(2)     <---------At4g35610   ------>NtERF2      ------>MYB83 --->ZmHOX2a(2)    <---------O2     <---------LBD16        --------->DEAR3(1)<---------MYB59   tcgcatcggcgatctcgtctctcgtcggagcagctaattccgccgattcaacacaagttcgacgacgaacagaatcagaccaaatctcgataagacgttg  25860400                                                                              <------NtERF2                                                                             ------>NtERF2                                                                           --------->MYB46(3)                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                         --------->ANAC46                                                                       ---------->DOF2                                                                      <------NtERF2                                                                      --------->WRKY18(1)                                                                     <---------RAP2.6(3)                                                                     <-----------HVH21                                                                     ------>NtERF2                                                                    --------->RAP2.6(2)                                                 ----------->HVH21  --------->ATERF1(2)                                                 --------->LBD16    --------->RRTF1(3)                                                 <---------SPL7     --------->RAP2.3(2)                                                --------->DEAR3(1)  --------->RAP2.3(3)                                               <------NtERF2        <---------ATERF1(2)                                               --------->ATERF1(1)  --------->DEAR3(1)                                               <---------LBD16      --------->RRTF1(2)                                              ------>NtERF2        <------NtERF2                                              <---------ATERF1(1)  --------->RRTF1(1)                     <----------DOF2         --------->DEAR3(1)    --------->ERF1                  <---------ARR11(3)         <---------DEAR3(1)    --------->RAP2.3(1)                  --------->ARR11(3)       <-----------HVH21      --------->LBD16          <---------STY1(2)         --------->MYB59          --------->GLK1(2)               ------>NtERF2    <---------MYB46(3)      --------->ARR14(2)          <---------ARR14(2)             --------->ANAC46<---------MYB52(1)      <---------GLK1(2)           --------->ARR14(2)            <---------LBD16 <-------GAMYB     ---      <---------ARR14(2)         <---------GLK1(2)      <---------ZAT6<---------MYB52(1)   --------->STY1(2)   aagagtccgattcggtatgaaatctttattctgaagaatctgcatcgtcgccggacaagtgttattcccgccgtcaagccaccgttggatactagctcga  25860500            <-------PIF5            ------->PIF5           <---------ATERF1(1)           <---------DEAR3(2)           --------->LBD16                                                                          -          <---------DEAR3(1)                                                                        <         <---------LBD16                                                                           --     --------->MYB52(1)                                                                        <-----     ---------->DOF2                                                     ========================HOX2a_HOX2a     <---------DOF5.7(2)                                                 <------ZmHOX2a(1)    <------  <------MYB83                     --------->YAB1                       <------MYB46(1)   <------ZmHOX2a(2)  <------MYB46(1)               --------->GLK1(1)      <------ZmHOX2a(1)<------MYB83      =========== <---------TOE2(2)         --------->LBD16        --------->CCA1(2)    --------->MYB59   --------->ARR11(3) <---------TOE1(2)       <---------LBD16         --------->ARR11(3)   <--------P         <---------ARR11(3) --->ZmHOX2a(2)         --------->MYB52(1)       <---------ARR11(3)  --------->TOE1(2)  --------->GLK1(1)   tcgtaggtaacgccggtgcaaagactcaccggagatttcataacgtcgagagatataggacatcggaagaaggtaggaacagtgatgcagagatcatctt  25860600       <----------DOF2                                        --------->ALFIN1      <---------ANAC58                                        <-----------RAV1(1)      <---------ANAC58                                      --------->ALFIN1 --------->ATHB12  <---------DAG2                         --------->ALFIN1 <---------ICU4    <----------DOF2                      <---------ANAC58 ----->ZmHOX2a(1) <---------ANAC58                      <---------ANAC46 ---------YAB1 <---------MYB52(1)                   ---------->DOF2 ------->TOE2(3)  <---------ANAC46             --------->AHL20(2) -----DOF2    <-------GAMYB                   --------->AHL20(2) ---ICU4     <---------MYB46(3)               <---------AHL20(2)--------->ALFIN1 ======HOX2a_HOX2a<---------ANAC58   --------->At4g35610<---------ANAC58      *TSS               <---   tcctcattgctttggccgttgcttttttgttttccgattagctccaaaataaataaaagcgtgtgtgtgggagagagagagaagagagagagtttgtcta  25860700                                                           <---------O2                                                           --------->O2                                                           <---------bZIP60(2)                                                           >>>>>>>>>>HY5<---------DAG2                                                           <---------TGA1a                                                           --------->TGA1a                                                           --------->bZIP60(1)                                                           --------->TGA2(1)                                                           <---------TGA2(1)                                                           <---------ANAC55(2)                                                           ========================bZIP_DOF                  <------MYB46(1)                          <---------bZIP60(1)                  <------MYB83                             <---------ANAC46                  ----------->GT1                          ----------->GT1                 --------->MYB59                          ----------->STF1             <---------ANAC46                            <---------TGA2(2)             <---------ANAC58                           ----------->TGA1<----------DOF2             <---------ANAC58          ---------->DOF2  ----------->HVH21          --------->ALFIN1     ---------->DOF2     ==================bZIP_DOF                       -        <---------ANAC58       ======================================bZIP_DOF                       -        <---------ANAC58=============================================bZIP_DOF                   <----        <---------ANAC46---------->DOF2==============================bZIP_DOF                   ----- ------TOE2(3)   <---------AtMYB61 <----------ID1  <----------DOF2   <-----------GT1 --------->GLK1(2)   tggttttagtgcgtggggtttggtttaaaagatgaaagagaaaaagagtcaaactttggtgacgtcaaatttcacttttttgacgagaatttttgtgttt  25860800          <-----------GT1      <---------AHL20(2)      --------->AHL20(2)    <----------DOF2    --------->TOE2(3) --------->ARR11(3) --------->AHL20(1) <---------ARR11(3)                                  --------->TOE2(3) <---------AHL20(1)                                 --------->YAB1 -------->RVE1(1)                                  >>>>>>>>>MYB98  <---------DAG2                ---- -------->CCA1(1)<---------AHL20(2)           <----------DOF2      <----------DOF2            ------- -----AHL20(2)   --------->AHL20(2)     <----------DOF2         <-----------GT1     <----------DOF2 ---->AHL20(2)  --------->YAB1          <---------DAG2 ---------->DOF2    <-----------GT1    <-------   aaatatctttaaatactattttaatgactaaatcgaataaaactttttcttttaacataaatcgaataactttttttttctcttctctttatgctattat  25860900                                               ----------->GT1                                      --------->ANAC58                                      --------->ANAC58                                    <---------ALFIN1                                   <---------ZAT18                                   --------->GLK1(2)                                   <---------ZAT14                        --------->TOE2(3)      <---                                  <---------ALFIN1                       ----------->GT1    <--------    --------->ZAT6               --------->At4g35610                     --------->ANAC46   ---------  <-----------GT1       --------->AHL20(2)---------->DOF2            <---------AHL20(2)     --------- ----->AHL20(2)         --------->YAB1--------->ANAC46          <---------YAB1    <---------AHL20(2)- -->YAB1             --------->YAB1--------->ZAT14        <---------AHL20(1)      --------->AHL20(2)< --YAB1           --------->YAB1 <---------At4g35610      <---------ARR11(3)   --------->YAB1    ----   aaaataactctactacaaaattagaataatatttcagcacactccaaagttgaaaaactatatattcttatttaaacgtaaaaataaaatctgatatatt  25861000                           ---------->DOF2                          <---------WRKY45                          <---------WRKY38(1)                          <---------WRKY12       --------->AHL20(2)<<<<<<<<<<WRKY62       <---------AHL20(1)<<<<<<<<<<WRKY40       <---------AHL20(2)<<<<<<<<<<WRKY18 ------AHL20(2)        <------MYB83 -AHL20(1)             <------MYB46(1)                 <---------YAB1      <---------ANAC46 >AHL20(1)    --------->MYB59                     ----------->GT1          ----------->GT1 >AHL20(2)<---------YAB1 --------->WRKY18(1)    <---------ANAC58         --------->ZAT14 -------->ARR11(3)    --------->MYB59           <---------ANAC58<---------ARR11(3)               <--- ---------ARR11(3)    <---------MYB46(3)        <---------ANAC46--------->ARR11(3)        <---------MYB52(1) ----->AHL20(2)     <---------MYB52(1)    <----------DOF2       <---------GLK1(2)      --------->MYB46(3)   aaaatctattttattttaggtcgtttggtcaaagaagaagtcttctttcggcgtgttaatattagagattttcagtagagtatatcacaaccgttgattt  25861100                                                                                    --------->ANAC46                                                                                  --------->ANAC46                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                              ---------->DOF2                   <---------ALFIN1                                            --------->LBD16                    <---------WRKY38(1)                                           <---------ANAC46                    <---------WRKY12                 --------->ALFIN1         <---------LBD16                   <---------ANAC46               <---------ANAC55(1)     <---------GLK1(1)                    <---------PCF2               --------->ANAC55(2)     --------->GLK1(1)                 --------->ALFIN1               <---------ANAC58       <---------ARR14(2)    --------->CCA1(2)<---------TCP16(1)    --               <---------ANAC58       --------->ARR14(2)   <---------ARR14(2)--------->PCF2       ---               <---------ANAC46      <------ZmHOX2a(1)     --------->ARR14(2)<---------TCP11(2)   <--       <---------TOE2(3)         --------->ALFIN1          <---------ARR11(3)<---------PCF5     <----       <---------TOE1(3)      <---------DEAR3(1)  --------->ALFIN1     --------->ALFIN1     <-------- ------YAB1 ----------->HVH21<---------ORA47(1)--------->DAG2       <------ZmHOX2a(1)  <---------ALFIN1   tgattttttaaggtctaacgtgttggaaatggacggtgaggatttgcggaaagtggatgcagatataagaggagagtggggtccacgctccaccgtttga  25861200  Previous    Next  AGI:  At5g64660.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G09800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46456.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 25859139    to: 25860678    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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