Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->ZAT14                                                                                        --------->ZAT18                                                           <---------TOE2(3)            <---------ZAT18                                             --------->AHL20(1)                    --------->ZAT2                            <---------AHL20(2)  <---------AHL20(2)                 <---------ZAT2                         ----------->GT1     <---------AHL20(1)                    --------->At4g35610                    <----------DOF2         --------->AHL20(2)                     <---------At4g35610                  ===================================================================================                  <---------------AGL15   --------->AHL20(2)----------->GT1  >>>>>>>>>SARD1  <-------TEIL    --------------->AGL15 --------->AHL20(2) <---------TOE1(3) >>>>>>>>>CBP60g --DOF2        <-----------GT1    ----------->GT1---------->DOF2      ----------->GT1   <---------ZAT14   gatgtgcattttcaaaataaccctttttagttaaatttgaaaaaaaatatataaagtctataaggtttttagaggtgaaatttggagctgtgcacttgaa  25842000             --------->ATHB12            <---------AHL20(2)            --------->AHL20(2)          --------------->AGL15          --------->TOE2(3)          <---------------AGL15                             ------>MYB83         <-----------------AGL1                             ------>MYB46(1)         <-----------------AG                              --------->WOX13(1)         <-----------------AGL3                    --------->SPL7         ----------------->AGL1                <---------LBD16   <---------ANAC58               --------->LBD16--------->LBD16  <---------GLK1(1)   <---------ANAC58      <---------GLK1(2)     --------------->AtSPL3                           -----   <---------ANAC46      --------->ARR14(2)   --------->MYB52(1)  --------->GLK1(1)             -----  --------->ABI4(2)  --------->DAG2 --------->ALFIN1--------->ANAC58                            -----  <-------TEIL      ---------->DOF2 ----------->HVH21 --------->DOF5.7(2)                     <------ =========================MADS_MADS<-----------HVH21--------->ANAC58      ---------->DOF2     -------   acggtgcgtttacattaattggaaaaggaatcgcaccggtgatgcgataaccggacgttaccaatcgaatttccgataaaacagcaattttcgaaaccaa  25842100                                                                                        <---------ALFIN1                                                                                        --------->AtMYB61                                                                                       --------->MYB46(3)                                                                                     <---------ALFIN1                                                       --------->ANAC58              --------->AtMYB61                                       <-----------GT1 --------->ANAC58         ------>MYB46(1) ->MYB46(1)                    <------NtERF2    --------->HSFC1(1)              ------>MYB83 ->MYB83                       ------>NtERF2    <---------HSFB2a(2)           ------->GAMYB ---->MYB52(1) ---------->DOF2 --------->LBD16  <---------HSFC1(1)            <---------MYB59 ---MYB59  --------->ANAC58   --------->DEAR3(1)--------->HSFB2a(2)        <-----------GT1     <----- -->AtMYB61--------->ANAC58--------->ANAC46 <---------GLK1(2)            <---------AHL20(2)    ------   accggttttgaacgagcaaaagcttgaaaacgccgcgttttaaacagtttctcgaagacgcattatcggttttattttaaccgaacaccaccactggttc  25842200                      --------->MYB52(1)                     --------->CCA1(2)                    <---------ARR14(2)                    --------->ARR14(2)                    <---------ARR11(3)                    --------->ARR11(3)                             ----------->HVH21     --------->YAB1               <---------YAB1                                      --------->ALFIN1     <---------YAB1             -------->HAHB4                                      --------->LBD16  --------->SPL7             --------->YAB1                                    <---------LBD16--------------->AtSPL3-             <---------ICU4                                   --------->MYB52(1)--------->LBD16    --            --------->ICU4                                   <-----------GT1 --------->MYB52(1)    --         --------->ICU4    <---------CCA1(2)             <---------YAB1     --------->ARR14(2)   <--- ----ZAT18  <---------ATHB51<---------ARR11(3)         ----------->GT1      <---------ARR14(2) ------ --->ZAT18<---------ICU4  <---------MYB52(1)    <---------AHL20(2)<-----------HVH21  --------->DOF5.7(2)   actatcaaatactaattatgaagataccggtatctttggaacggtgtttttaaaatgttgttattaccggtgatgcgagaaccggacgttatcaaaaatt  25842300                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                ---------->DOF2 <---------AGP1                                                               <------ZmHOX2a(1)--------->ARR14(2)                                                               =========================HOX2a_HOX2a                                                               ==========================HOX2a_HOX2a                                      --------->ANAC58      =============================HOX2a_HOX2a        ------------>CBF              --------->ANAC58      ============================HOX2a_HOX2a  ---------->DOF2                     --------->ANAC46  --------->LBD16         <---------ARR14(2) -------->At5g28300        <------MYB46(1)             <---------HSFB2a(2)      --------->AGP1 ------->LBD16             <------MYB83               ----------------->AGL1    <---------ARR11(3) --------->GT1            --------->MYB59             <---------LBD16           --------->ARR11(3) ------LBD16              <---------AtMYB61         <---------SPL7       <-------GAMYB       *TSS --->GLK1(2)            <---------MYB52(1)---------->DOF2   <------ZmHOX2a(1)  <---------CCA1(2)   ccggtaaaacagcaatttcaaaaccggtttggttttgaacaagcaaaagctcgatgtccggaggaggaaagagaccgttgtagatctgtcttcttcatcg  25842400                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                        ---------->DOF2                                                                    --------->HSFB2a(2)                                                                    --------->HSFC1(1)                                                                    <---------HSFB2a(2)                                                                    <---------HSFC1(1)                                             <<<<<<<<<TBF1  --------->GLK1(2)                  ------              <---------GLK1(2)         <---------GLK1(2)  <---------GLK1(2)                 <-------  ----------->GT1                --------->GLK1(2)         <---------ARR11(3)                --------   aagatggtgaaacacagaaactcatctcgctcgataatctcatattcttcttcaatagcaagattcttctctagaaaagctatttctctctacttgatct  25842500                                                                             --------->MYB46(3)                                                                     ------>MYB46(1)                                                                   <---------MYB46(2)                                                                   --------->AtMYB61                                                                   <---------MYB111(1)                                                                   --------->MYB46(3)                                                                  --------->ANAC58                                                                  --------->ANAC46          <-----------GT1                                         --------->ANAC58       <----------DOF2                --------->LBD16           --------->ANAC46               ------      <---------ANAC58               --------->HSFB2a(2)      <---------ALFIN1                <------ZmHOX2a(2)      <---------ANAC58           <---------At4g35610          --------->AtMYB61              <-------  <----------DOF2                --------->At4g35610    <---------ICU4  --------->TOE2(3)    -------- >ZmHOX2a(2)                     <---------ZAT2        <---------ATHB12--------->YAB1        <------- --ARR11(3)    ----------->RAV1(2)   <---------HSFB2a(2)--------->YAB1<---------ATHB12       <------- ->ARR11(3)<---------At5g28300   --------->ZAT2        --------->ICU4------>MYB83        <---------LBD16   tcgtctttgcttttaccatctgggttctcgtcttcagctccagaaacattcaaaccgatgatgaccacaccaaacatcaacaacaacatcatcgggatct  25842600                      <------NtERF2                     ------>NtERF2                    --------->DEAR3(1)                    <---------ALFIN1      <------MYB83                  --------->LBD16         ----------->GT1                  ------>NtERF2           <------MYB46(1)                 --------->ANAC46        --------->MYB59                <---------LBD16        <------ZmHOX2a(1)                                           --              --------->ARR14(2)    ------>ZmHOX2a(1)                         <---------AtLEC2  <----         --------->GLK1(2)          --------->HSFB2a(2)                  <---------ARR14(2)     <----     --------->YAB1--------->MYB46(3)<---------TOE1(2)                   --------->ARR14(2)     <---- >ZmHOX2a(2)  <---------ARR14(2)    <---------HSFB2a(2)               <---------ANAC46       -------- ----ARR10 --------->ATHB12      ------>NtERF2                      <---------MYB46(3)     <---------bZIP60(2) ->ARR14(2)--------->YAB1    <-----------GT1      ----------->GT1   --------->ALFIN1       ---------- --ARR14(2)<---------ICU4 --------->ARR14(2)  --------->DAG2      <---------ANAC58         --------->At4g35610 --ARR11(3)<--------HAHB4 <---------ARR14(2) ---------->DOF2      <---------ANAC58    --------->CCA1(2)   aatcgattcagaatcatttccgccaccgtatttgcctcctaggaaggtaaagttgttaatatttcatgggttgtggatttgaatgaagaaatgaggtgac  25842700    <------MYB46(1)    <------MYB83                                             <---------ARR14(2) ------->ATHB12                                      <---------ARR14(2) -----ANAC58                                         --------->GLK1(2) -----ANAC46                         <---------DAG2  --------->ARR14(2) -----ANAC58                         <----------DOF2<---------GLK1(2)        --------->ANAC46 --->HVH21                 ---------->DOF2   <---------At4g35610          --------->ARR14(2)    <---- ->GT1        ------>ZmHOX2a(2)--------->YAB1--------->At4g35610          <---------ARR14(2) ------>ZmHOX2a(1)   ttgatttggtttttgatcggaacaattgagaaagcataactttattgagcttcagaatttgcagaaaccgtatgaaaatactcaactttggactcctcct  25842800        <-------GAMYB         ------>MYB46(1)                                      ------>ZmHOX2a(2)        <---------ANAC58      ------>MYB83                                       <---------ARR11(3)        <---------ANAC58      -------->P                     <---------ZAT18     ------->TEIL   <----------DOF2 ------->MYC3                            --------->At4g35610   <---------AGP1 <---------At4g35610        <---------MYB59 <---------TOE2(3)--------->ZAT18     --------->ARR11(3) --------->At4g35610 <-----------HVH21    ---------->DOF2  <---------At4g35610<---------WOX13(1) ------DOF2        <-------MYC3    --------->LBD16   ---------->DOF2       <---------YAB1 <---------TOE1(2)   ttcagctttgggttgcatccatgtgtcaaacctactccgaaatacaaaggtatgccaaagaagctcacttccaatttctgatggatctatcttgggtttt  25842900  Previous    Next  AGI:  At5g64600.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46424.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 25842393    to: 25845411    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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