Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->ANAC58                                                                      --------->ANAC58                                                            <---------HSFC1(1)                                           --------->ARR11(3)       ---------->DOF2                                           <---------ARR11(3)     --------->ANAC58      ---------->DOF2              <---------ANAC58         --------->HSFB2a(2)    <------ZmHOX2a(2)              <---------ANAC58         <---------HSFB2a(2)                ------ ------>ARR14(2)           <---------ANAC55(2)              --------->HSFC1(1)                 <----- -------ARR14(2)           --------->ANAC55(2)     <----------DOF2--------->ANAC58----------->GT1<---   tatacgatcaaagtccgaaactgagtatcacttattagcttgcaagttcttcactttgcattctagaaacgaaagccctagaattggataattctagcta  25838400                                                                                                   --                                                                                      <--------------                                                                              ---------->DOF2      --          ----------->GT1                                               <---------ZAT14            <-          <---------ZAT6                              ----------->HVH21 --------->ZAT14            -- --------->AGL15             --------->ATHB12       ------>ZmHOX2a(1)   <---------ZAT18            -- ----------AGL15  --------->TOE2(3)       <---------ARR11(3)          --------->At4g35610          -- ------YAB1       --------->TOE1(3)     <---------At4g35610           <---------At4g35610      ------   taatttgaaatagagataaacctcaaatagacgattggactcagcatcttcttcctgtgaaactgaagactcagtagactcaaagctcgatgtactgcaa  25838500                                                                 <<<<<<<<<MYB2                                                               <------MYB46(1)                                                              <---------AtMYB61                                                             <---------MYB52(1) ------->ANAC58                                             <-------GAMYB -AtSPL3                                                   <---------ANAC58 ------->ANAC58                                            <---------ANAC58 --------ANAC55(2)                                    <---------At4g35610 ------->ANAC55(2)                                    --------->At4g35610      --------->ANAC58 ------->ANAC55(1)                                  <-----------GT1            --------->ANAC58 ------->ANAC46        ----------->GT1      <---------At4g35610<------MYB83 <---------SPL7 ----->RAV1(1)    <---------ANAC46          --------->At4g35610<---------MYB46(3)              ------   caagtaatcaaaccatttcttcgtgaaggaaaaagattgaatttggagcttaatttagcttccgttggttttcttcgacggacgaaactagacagagaac  25838600                                                        <------MYB46(1)                                                        <------MYB83                       --------->ZAT14                                                --------->CCA1(2)                  <-----------TGA1                                            <---------HSFB2a(2)            --------->CCA1(2)                                            --------->HSFB2a(2)           --------->ARR11(3)    -----                                            --------->HSFC1(1)--------->MYB52(1)  --------->ANAC58                                            <---------HSFC1(1)<---------DOF5.7(2) --------->ANAC46                                           <---------ANAC46 --------->DOF5.7(2)   --------->ANAC58          <---------LBD16           <---------TOE2(3) <--------P   --------->ZAT2<-----------STF1 --->GLK1(2)                        <---------TOE1(3)<---------ANAC46     <---------ARR11(3)   <-----   ctcgaaattgactggggaagagggtattagaagggtttaagggtttcgagaaatgggttggagttaacgagctcgagatataaaacgtcattgttcagtc  25838700                                                                    --------->HSFB2a(2)     <------MYB83                                                                    <---------HSFC1(1)      <--------                                                                    <---------HSFB2a(2)     <------MYB46(1)                    <-----------GT1                             <----------DOF2            <---------MYB46(3)        --------->ZAT2                                     --------->MYB46(3)             <---------ANAC46        <---------ZAT2                                     <------------MYB.PH3(2)        <--------P        <---------At4g35610                                <---------MYB52(2)            <---------MYB52(1)        --------->At4g35610                              ----------->RAV1(1)         <---------ZAT2 ---->ATHB12----------->GT1              ---------->DOF2*TSS------->GAMYB            <---------At4g35610 ----ATHB12----------->GT1             --------->ZAT18  <----------ID1  ----------->GT1--------->ALFIN1   attagattagagctgggaaaaatttcccctcgatttctaagtgcaaagagaaacgatagcaacaaactttctagaggtgaaatttgaagctggtgggttc  25838800                                      <-----------GT1                                         -------                               <---------ANAC46                                             ---------                               <---------ANAC58          <---------ANAC46                   <--------                               <---------ANAC58         <------NtERF2                      --------->SPL7                              <-------TEIL             ------>NtERF2                   --------------      <------------CBF  --------->MYB52(1) <---------GLK1(2)                         <-----------GT1 --------->ANAC46   <------ZmHOX2a(2)<-----------GT1  --------->ANAC46            --------->YAB1 -DEAR3(2)  ---------->DOF2   --------->ABI4(2)   ---------->DOF2      --------->MYB52(1)--------->LBD16   ttcacgaagattgaaaaagacgatcgaaacggtgcgtttttaacagtttctcaaacgcgccgttttaagagattaccggttctattgtaaccggacatca  25838900                                   --------->ARR14(2)                                   ------>MYB83                                   <---------ARR14(2)                                   ------>MYB46(1)                                 <---------MYB59                               --------->MYB52(1)                              --------->CCA1(2)                             <---------ARR14(2)                             --------->ARR14(2)                                             ---------                             <---------ARR11(3)                                             <--------      <----------DOF2        --------->ARR11(3)                                          --------->AHL20(2)  --------->WRKY38(1)   <---------YAB1           <----------DOF2                      --------->YAB1  --------->WRKY12    -------->HAHB4          <---------ARR11(3)                      <--------HAHB4 <--------P           <---------ICU4          --------->ARR11(3)         <----------DOF2<---------YAB1 ---->HVH21           --------->YAB1      ---------->DOF2       <---------TOE2(3)    <---------YAB1 >bZIP60(1)          --------->ICU4--------->MYB52(1)          --------->DAG2       ------->TEIL -bZIP60(1)          <---------ATHB51  --------->LBD16        ---------->DOF2    <---------ANAC55(2) ->AtSPL3         --------->ICU4----------------->AGL1     --------->TOE2(3)     --------->ANAC55(2)   ccggttgactttcaaatgtgctaattatgaagataccgaaccggtgaagctctttctcaatccataaaggaaactctttcaatatgtatcattatatatt  25839000                                                                  --------->YAB1                                                            --------->ANAC46                                                           --------->ZAT18         <---------TOE1(3)                   --------->MYB52(1)                      <---------ZAT14 --------->O2    --------->KAN4(2)                                    --------->ZAT14   <---------O2  <-------TEIL<---------WRKY45                         <---------------AtSPL8      <---------TOE2(3) >ARR11(3)    <---------WRKY38(1)                      --------------->AtSPL8      --------->DAG2   - -AHL20(1)    <---------WRKY12       ------->TEIL     <---------ANAC46---------->DOF2            <---   ctggttcattctctagtcaactaagagacatttgctctgtatgtatgatatagatgatgtgtacacaattgtaaaagacgtcgataaggttgaacatgga  25839100                                                       --------->ANAC58                                               --------->LBD16                                              <---------ANAC46                                              <---------ANAC55(1)                                              --------->ANAC55(2)                                              <---------ANAC58                                         <------MYB83  --------->ANAC58                                         <---------HSFB2a(1)                                         <---------HSFC1(2)                                         <---------MYB46(3)                                 <---------ARR14(2)  ---------->DOF2     <----------DOF2                            <---------MYB46(3)<---------ANAC55(2)        <---------DAG2                          <---------ANAC58    <---------ANAC58       <---------ZAT18                          <---------ANAC58 --------->ARR14(2)        --------->ZAT18                <                          <-------GAMYB  <------MYB46(1)          --------->DAG2                    <                         <---------MYB46(3)<---------ARR14(2)    --------->DAG2                     < -------->At4g35610     <---------AtMYB61--------->HSFB2a(1)    ---------->DOF2                     < ---ZmHOX2a(2)        <----------DOF2    --------->HSFC1(2)---------->DOF2          --------->At5g28300   tcatatgacaaaacctcttccatgctttggttgtggaatcggatggttccgtgttaaaagcaaaagaaaaggggactttttgtctcggtaattttgtttt  25839200                                                       ---------->DOF2                                                     <---------HSFB2a(2)                                                <---------HSFC1(2)                                                --------->HSFC1(2)        --------->AtLEC2                        --------->HSFB2a(1)     --------->WRKY18(1)                        <---------HSFB2a(1)    <-----------HVH21                          <---------YAB1   <------MYB46(1)                           <------ZmHOX2a(1)   <------MYB83                            <---------TOE2(3) ---------AtLEC2                          --------->YAB1                     <---------DAG2 ---------ANAC58                       <---------AHL20(2)                    <----------DOF2 ---------ANAC46     --------->ANAC46 --------->AHL20(2)                 <-----------GT1 ---------ANAC58   <-----------GT1    <---------AHL20(2)      --------->YAB1<---------DAG2        ---   ttgcttggtcatgcatcagtttcacaacatgttctctctattaattaggatgattccaaaagaatcaaaaacttatgacctttttgctaaactttcaaat  25839300  Previous    Next  AGI:  At5g64580.1    Description:  AAA-type ATPase family protein. similar to VAR1 (VARIEGATED 1), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT5G42270.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ63075.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46426.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain Peptidase M41, FtsH extracellular; (InterPro:IPR011546); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 25834318    to: 25838756    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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