Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <---------TOE1(1)                                    --------->TOE2(2)                                    <---------TOE2(1)                         --------->At5g28300                                          <-----------HVH21                      <---------ABI4(1)                                               --------->ARR14(2)                      <------NtERF2 --------->TOE1(2)                                 <---------ARR14(2)                     <---------RAP2.3(1)                 --------->HSFB2a(2)         --------->ATERF1(1)                     <---------DEAR4(2)                  <---------HSFB2a(2)        --------->LBD16       <-------TEIL <---------DEAR3(1)              <---------ZAT2                 <---------ANAC46      --------->ARR14(1) <------NtERF2  --------->HSFB2a(2)                        <---------ANAC58      --------->CCA1(2) <---------DEAR3(2)          --------->ZAT2                 <---------ANAC58     <---------ARR14(2) <---------MYB46(3)          --------->At4g35610           <---------LBD16     --------->ARR11(1)<---------ANAC46 --------->LBD16  --------->LBD16        ----------->HVH21     --------->ARR14(2)<---------DEAR3(1)           <---------At4g35610         --------->ALFIN1  <---------------------WRI1       ----------->RAV1(2)  <---------ANAC46      <---------ANAC58  ----- --ANAC58           <---------RAP2.3(2)<---------ANAC46 <---------LBD16       <---------ANAC58  ----- --ANAC46          --------->At4g35610<---------LBD16  <---------LBD16        <---------ANAC55(2) --ANAC58    ---------->DOF2     <-----------GT1  <---------CCA1(2)  ----------->GT1------>NtERF2   aaacagagatacgttgaaagaagcggcggtgagtataacctgcgggaaactcgtagctccgggaacttggctagaaaaatgcgtgccgggtccgatgtaa  25830200                                                                                                  ---                                                                                                  <--                                                                                                  <--       <---------ZAT14                                                                            ---       --------->REM1(2)                                         <----------DOF2           <---------ANAC58       --------->ZAT14                                           ====================================      ----------->HVH21                                     <---------MYB52(1)             <---------ANAC58      <---------MYB52(1)                                    --------->DOF5.7(2)        <----------DOF2     <-----------HVH21                                     ==========================================     --------->LBD16                                       <-------GAMYB               ==============    <---------ANAC46                                   --------->ANAC58               ------>ZmHOX2a(2) --------->ANAC58                                      --------->ANAC46              <------ZmHOX2a(2) --------->ANAC58           --------->YAB1             --------->ANAC58             --------->ARR14(2) ---->ANAC58         --------->AtMYB61              ----------->HVH21               <---------ARR14(2) ---->ANAC58        --------->MYB46(3)             <-----------HVH21                <---------ARR11(3)   gaaacgccgtgaagtgcttcagaccaccattcatacgttggaatcccaagacgagtcacgccgttagctttactcactaaaaacccgatcttttcttgca  25830300                                                                     <---------ANAC46                                                                    --------->ATERF1(1)        <-----                                                                    <------NtERF2              ------                                                                   <---------DEAR4(2)      <---------                                                                   <---------RAP2.3(1)    --------->bZIP60(2)                                                                   <---------ATERF1(1)    --------->TGA1a                                                                   <---------ERF1         <---------O2 ------>O2                                                         <---------ORA47(2)     --------->ANAC46 -------TGA1a                                   <-----------RAV1(1)------>NtERF2          --------->O2 -------O2 ------>NtERF2      --------->ARR14(2)--------->ALFIN1  <---------RAP2.3(3)    <-------TEIL ------>TGA1a    <------ZmHOX2a(2)         --------->MYB52(1)     <---------DEAR3(1)  --------->ZAT2 =======bZIP_DOF<---------ARR14(2)   ------>ZmHOX2a(2)            <---------RAP2.3(2) <---------ZAT2 =======MYC_MYB --------->ARR14(2) --------->ARR11(3)             <---------RAP2.6(2) <---------At4g35610 =======bZIP_DOF<---------ARR11(3) <---------ARR11(3)<---------HSFB2a(2)              --------->At4g35610   acgtgagcctcgcgaccagatcagcgactcggtattcgatcttcaaaacggtgttgcagaaaccataggcggcgagagaagggtttgcagctacgtcgca  25830400                                                                                              <------             --------->ATHB12                                                                 -------            --------->ICU4                                                                 <---------MYB46(3)            <---------YAB1                                                                --------->ALFIN1       --------->LBD16                                                                    <---------DEAR3(1)      --------->TOE1(2)                                                                   <---------AtMYB61      --------->TOE2(2)                      <------ZmHOX2a(1)                          <------MYB83     --------->DEAR3(2)              --------->DAG2                                     <------MYB46(1)    --------->MYB52(1)              ---------->DOF2                                    <---------AtMYB61 ------RAV1(2)                   --------->AHL20(2)                                    --------->ALFIN1 --->ATERF1(1) <---------WOX13(1)<---------AHL20(2)                                  <------ZmHOX2a(1) --HVH21 <---------DEAR3(1)     --------->AHL20(2)                          <------ZmHOX2a(1) -------   ggcgaaaaccggcgatgattgagcgtttgagaaatttaaaaagtagaggaagaaacagagaaagattagataaacagaggaaacagaggatggtggtgct  25830500                                                                <----------DOF2                                                               <---------ANAC58                ------                                                               <---------ANAC58               -------                                                             *TSS                           ---------                                                        --------->ARR11(3)               --------->YAB1 ---ZAT14                          <----------DOF2<---------ANAC58                       ----------->GT1 -->ZAT14                         <---------ANAC58<---------ANAC58               ----------->GT1 -->ZAT18                         <---------ANAC58<---------ANAC46<---------AtMYB61 <-----------TBP   ctgtttctccttgttaatggagaagaagagcccattgctttgtgtttcgatttcttgggatattggctttggtttagtgagactggttttatagtaataa  25830600                                                   --------->ATHB12                                                   --------->ATHB51                                                   -------->ATHB1                      --------->YAB1                                                   <---------ICU4                     <---------YAB1                                               --------->AHL20(2)                     --------->ICU4                                              --------->AHL20(2)              ---------->ID1      ---                                         >>>>>>>>>GT-1                       <-----------GT1  -------                                       <-------GAMYB<------------CBF   <---------AHL20(2)   <--------                                      <---------MYB46(3)       <---------AHL20(2)    <---------AHL20(2)       <---------At4g35610      <---------ARR14(2)--------->AHL20(2)   --------->AHL20(2)   <--------      --------->ANAC58          --------->ARR14(2)<---------ATHB51 <---------AHL20(2)<---------AHL20(1)    <--------P             ---------->DOF2    <---------AHL20(2)   --------->AHL20(2)--------->AHL20(2) ---->DOF2      <---------ZAT18 --------->GLK1(2) <---------AHL20(2)  <---------AHL20(2)    <-------- -->ICU4        --------->ZAT14<---------GLK1(2)  --------->ICU4  <---------AHL20(2)--------->YAB1<-- >YAB1--------->ANAC58 --------->ZAT6 ----------->GT1          --------->AHL20(2)  <---------YAB1 <--   agagtggtaagctactactacgctctcactaaagaatctgtggttaatataaattattgtgacatttatttatttattttgacctattataattaagatt  25830700                                         <---------ANAC55(2)                                       --------->CCA1(2)                                      --------->ARR11(1)                                     -------->HAHB4                                     --------->YAB1                                    <---------YAB1                                  --------->YAB1                            --------->ANAC58                            ----------->GT1    ---------->DOF2         --------->ANAC58          <---------MYB46(3) -------->GT1             ---------->DOF2--------->ANAC58 -->ARR11(3)--------->ARR14(1)    <---------ICU4     --------->ALFIN1      <------ZmHOX2a(1) -TOE1(3)   --------->CCA1(2)    --------->ICU4 --------->MYB52(1)   <---------ZAT6                <- -TOE2(3)  --------->ARR11(1)    <---------ATHB51--------->SPL7   --------------->AGL15            -- -YAB1   <---------YAB1  <------ZmHOX2a(1)     <---------SPL7     =================================== -------ANAC46        <---------HSFB2a(2)--------->ANAC58     --------->ARR14(2)             -------- -------ANAC55(2)     --------->HSFB2a(2)--------->ANAC55(2)  <---------ARR14(2)         <-----------HVH21   atgtgaaaaagatgatacggtcttcgaggaaagaaataatgatacggaccatacggtgtttgtggatactagtattaggatttatgacctctgtcatgtg  25830800                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----                          --------->AHL20(2)---------->DOF2                                    ------                        <---------DAG2 <---------------AGL15                                   <-----                        --------------->AGL15                                                  <-----       --------->YAB1   <---------------AGL15  ----------->GT1                                 ------      <---------ATHB12  <----------DOF2--------------->AGL15   <------MYB46(1)        --------->ZAT18 --------MYB46(3)      <-----------------AGL3--------->DAG2    <------MYB83           <---------ZAT18 --------->GT1         ================================MADS_MADS                  --------->DAG2----- ========================================MADS_MADS  ---------->DOF2  <-----------GT1<---------------AtSPL8 ->ANAC55(2)         <-----------GT1   ----------->RAV1(1)     ----------->GT1   ---------->DOF2-----   tttgttaaatcataaatctgattttactttatatagttttgcaacaaaaaggaataaagcatagtgggtttaaactttatacataaagtgtacatcgaat  25830900         <---------AHL20(2)                                        <---------AHL20(2)        --------->AHL20(2)                        <---------DAG2  --------->AHL20(1)   <---------ANAC46                               <----------DOF2 --------->AHL20(2) ----->KAN4(2)                                   <---------DAG2   <---------AHL20(1) ------TaMYB80                                   --------------->AGL15 -----KAN4(1)                                    <---------------AGL15 -----HSFB2a(1)                                 <-----------------AGL2 ---->TaMYB80           <----------DOF2         ----------------->AGL1 ----ARR14(2)        <-----------GT1            <-----------------AGL1                            <-- ----KAN4(2)      <---------ICU4                <-----------------AG                    <---------MYB52(1) --->ARR14(2) <-----------GT1 ---------->ID1    ----------------->AG   ----------->GT1<---------ANAC58 ---->HSFB2a(1) --------->ANAC55(2)            -------->P         <---------AHL20(2)  <---------ANAC58 ---->KAN4(1) <---------AHL20(2)              <-----------GT1--------->AHL20(2)       <---------ANAC46   attctacgtataaaatttacttatttctttttgtctcaacgtataaacttacctttttcggtataaaataaaattgtaagtatagatttcgtttggctat  25831000                                                                      <----------DOF2                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                   --------->AGP1                                                                   --------->ARR14(2)                                                                   --------->ARR14(3)                                                                   <---------ARR14(3)                               <---------DAG2                      <---------ARR14(2)               -                <---------ATERF1(1)                                --------->ARR11(3)            <---             <---------At4g35610    <-----------GT1          --------->MYB52(1)            ------->TEIL  <---------ZAT14              <----------DOF2    <----------DOF2  <---------ARR11(3)     <---------CCA1(2) -------------AtSPL8   <---------CCA1(2)     <----------DOF2 <-----------GT1          <---------ANAC46   agagtacaatgtttcagacgaccccatatcaaacttttttacatatgcttttctttttcaaaataacgagatctttgagttttttggtctgtgtatctct  25831100  Previous    Next  AGI:  At5g64570.1    Description:  XYL4 (beta-xylosidase 4); hydrolase, hydrolyzing O-glycosyl compounds. similar to BXL1 (BETA-XYLOSIDASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G49360.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G19620.1); similar to alpha-L-arabinofuranosidase [Raphanus sativus] (GB:BAE44362.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39902.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49671.1); contains InterPro domain Gly Range:  from: 25827341    to: 25830561    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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