Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->GLK1(1)       --------->ARR14(2)                          <------ZmHOX2a(1)   <---------ANAC58       <---------ARR14(2)                       --------->YAB1         <---------ANAC46   --------->At4g35610                          <-----------RAV1(2)    <---------ANAC58   <---------LBD16                        --------->ANAC58         <---------ANAC58                -- ------AHL20(1)                           --------->ANAC46         <---------ANAC58   --------->At4g35610 ----->AHL20(2)                      <---------ZAT14    --------->HSFB2a(2)           <---------At4g35610 ----->AHL20(1)        --------->TOE2(3)  --------->ANAC58  <---------ZAT14     <-------MYC3    <---- ------ARR11(3)  --------->ZAT6      --------->ZAT14    <---------HSFB2a(2)     ------->MYC3    -----   atattagcggaactcattctcactaacttaaaaacagagtgaagacgctatcaggagtcgagaacagagacttgcttgagcatatggaagctcaaatgtc  25795000                                        <---------LBD16                                      --------->ARR11(3)                                      <---------ARR14(2)                                   --------->YAB1           <----------DOF2        <-------TEIL  <---------HSFB2a(1)          -------->HAHB4                         <---------ARR11(3)  --------->HSFB2a(1)          --------->ATHB12                   --------->ANAC46 --------->DAG2               <---------ATHB12                    --------->ANAC58 -------->DOF2           --------->At5g28300                      --------->ANAC58 -----ANAC46           --------->ZAT6 --------->ARR14(2)   <----------DOF2 ---->ETT(1)         <-----------GT1 <---------CCA1(2) ---------->ID1 --------->ARR11(3)     <-------   ggaaaggttccatcttttggttttaactgtaaatgattcatatctggatgaaattttgttcctttaccaagacatcttctcaaaacacaaacatttaact  25795100                                                            ------>ZmHOX2a(2)                                                           <---------At4g35610                                                           <------ZmHOX2a(2)                                                           --------->GLK1(1)                                                           --------->At4g35610                                                          --------->ARR11(3)                                                          <---------ARR14(2)             <---------HSFB2a(2)                                                          <---------ARR11(3)             --------->HSFB2a(2)                    --------->MYB46(3)                    --------->ARR14(2)          <---------ARR11(3)                  <-----------GT1                         <---------ARR14(3)          --------->ARR11(3)             <---------ANAC58           <---------TOE1(3) --------->ARR14(3)         --------->CCA1(1)             <---------ANAC58           <---------TOE2(3)<---------GLK1(1)<---------GLK1(2)   ------- ----GT1     <---------ANAC46 <---------AtLEC2        <---------LBD16 ---------->DOF2--------->RVE1(1)   tgtattgtgtctcttgcttgtaactactgtttccatgaagttaatgtttttgcaattggggatctgcatatagaaagatgctctaaaatatctcgaaagg  25795200                                                                             --------->YAB1                          <---------ALFIN1                                --------->YAB1                      <---------ANAC58                                   <---------AHL20(2)                      <---------ANAC58                             ----------->GT1                      <---------ANAC55(2)                        <-------GAMYB               <---------TOE2(3)              --------->ATHB12  <---------MYB46(3)     <----------DOF2  <---------ANAC46       <---------ATHB12   --------->MYB52(2)                  - <---------ALFIN1 <-----------HVH21  --------->DAG2             --------->MYB55(2)                <-- -->DAG2      --------->MYB52(1)   ---------->DOF2              --------->MYB111(2)            <-----   tttccacctttaaaactaagggttacgtccacatctcaaaaggctcaatctttggagtttgaacggttgttgtaaataatcaaattttgtactagagcct  25795300                                            <---------YAB1                                          --------->YAB1                <------------CBF       *TSS                                      <---------AHL20(2)                --------->ARR14(2)  ---------                                     <---------AHL20(2)                 <---------ARR14(2)  <--------                                     --------->AHL20(1)            --------->MYB52(1)      ----------  <---------YAB1  ---------->DOF2    <---------AHL20(1)            ---------->DOF2  <----------ID1--- -------->YAB1  <---------YAB1       --------->AHL20(2)    --------->AHL20(2)----------------->AGL1 ----------CBF--------->YAB1    ------------>CBF       --------->LBD16 --------->ATHB12  --------->MYB52(1) ----MYB59   <---------YAB1   --------->GLK1(2)      <---------LBD16   <------ZmHOX2a(1)---------->DOF2   aattgtgattagtcgatgataaaagaatatagaatccaatataatgaagattagcaccggattatatactaaaggattggccatttgggacaaagggaga  25795400                             <---------DEAR3(2)                            <---------DREB2C(2)                            <---------DEAR4(1)                                                    <--                            <---------At1g77200                                                  ----                  --------->ZAT14                                          --------->ARR14(2)    ----                  <---------ZAT14                                          <---------GLK1(2)     ---- -->GT1      <---------At4g35610                                       --------->HSFB2a(2)     ------ --ID1       --------->At4g35610                                  <----------DOF2             <------ -------------->ANAC81     --------->DDF1             --------->ANAC46 <---------LBD16 <-----------GT1 ------->DOF2<---------ZAT14<---------DEAR3(1)       --------->LBD16   <---------HSFB2a(2)    <------   aaaagagagacagagagcagagcagagatgtcggtgagattacttcatcttcttccccaaaacaattccttttctcggaatctcaaatttcaccatctgt  25795500          --------->ARR14(2)          <---------ARR14(2)          --------->SPL7         ----------->HVH21        --------->LBD16        <-----------HVH21       --------->ANAC58       --------->ANAC58       --------->ANAC46       <---------ANAC55(2)       --------->ANAC55(1)       --------->ANAC55(2)  ----------->HVH21  <---------ETT(1) --------->DEAR3(2) --------->MYB46(3) -------WRKY18(1) ----->WRKY12                                       <---------TGA2(1) ----->WRKY38(1)               <------ZmHOX2a(1)    <---------bZIP60(1) ------->HVH21          <---------ZAT18             --------->bZIP60(1)                     >>>>>>>>>TBF1 --->At4g35610   --------->GLK1(2)       <------ZmHOX2a(1)                        <------NtERF2     < -----RAV1(1)    --------->ARR14(2) <-----------------------TaNAC69(2)      <------ZmHOX2a(1)     --- ---MYB46(3)     <---------ARR14(2)--------->CCA1(2)--------->TGA2(1) <------ZmHOX2a(1) <------ZmHOX2a(1)   tgacccgacccgtaacccgaatccagtgcataaggagagacgaggaagacgatgacatcatcaacaagatgaggattaggaggccgaagaggaagaagaa  25795600               <---------ZAT2                                     --------->At4g35610               <---------At4g35610                                --------->ZAT2               --------->At4g35610                                <---------At4g35610        <---------ARR14(2)<---------ARR14(2)                      <---------ZAT2        <---------GLK1(2) --------->ARR14(2)                    <------NtERF2                       <        --------->ARR14(2)<---------GLK1(2)                    --------->LBD16                    ---  <---------YAB1     ----------->RAV1(1)      ---------->DOF2 <------NtERF2                    ------ ---------ICU4 --------->ZAT2             <---------LBD16    <---------LBD16                 <------- ------>ARR11(3)    ----------->HVH21  <---------GLK1(1)  <-----------HVH21              ---------->DOF2   gattatgaccgattcggagctagcgacagatttggctagagaaatcgggaaagcgaacacagtcgcggagcagagaagagaagcgatgaagaagagcggt  25795700    <-----------RAV1(1)    <---------ANAC46 --------->GLK1(2) ---------GLK1(2)                                             <----------ID1 -------->ARR10                     ---------->DOF2     --------->AHL20(2) --->At5g28300             ------->MYC3             ----------->GT1 --DEAR3(1) <------NtERF2  <-------MYC3        --------->At4g35610  --------->ATHB12             <---   gagattctgtgggcagagttttgtaggcatatggatttgaaagaagatgagatgaagataaaatggaacaagattggagaagaagagaaattggttctgg  25795800                       ----------->GT1                       <---------At4g35610                       <------MYB83                       <------MYB46(1)                      --------->ALFIN1                              <---------WRKY18(1)             <---------YAB1                                        --------->WRKY45        <-------GAMYB <---------MYB46(3) <<<<<<<<<GATA-1           --------->WRKY12  --------->GLK1(2)       <---------MYB46(3)            <----------DOF2               --------->WRKY38(1)    ------------>MYB.PH3(2)         --------->TOE2(3)           --------->ATHB12    <---------GLK1(2) -----P--------->MYB52(2)     <-----------GT1           ---------->DOF2           ----------->ARR10   ttagagagtttgttgatgaatgggctggtgattttcaacctttatctattacatctgttaaagaaatggttgaccaagagtgtttagattctgacaaaac  25795900  Previous    Next  AGI:  At5g64470.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G14530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67844.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 25793251    to: 25795189    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g64480.1    Description:  similar to hypothetical protein MtrDRAFT_AC148396g23v2 [Medicago truncatula] (GB:ABN05732.1) Range:  from: 25795395    to: 25796148    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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