Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <-------TEIL                                                                      <---------YAB1                                                                    --------->YAB1                <--                                                                    ----------->GT1               ---                           --------->ARR14(2)                      <---------YAB1              <----- ------TEIL    ----------->RAV1(1)                               --------->CCA1(2)    --------->AHL20(1) ------>GT1  --------->At4g35610            --------->AHL20(2)  <---------ARR14(2)    <---------AHL20(2) ----------AtSPL8          <---------ARR14(2)                   --------->ARR14(2)    --------->AHL20(2) ->DOF2     --------->ANAC46                <---------AHL20(2) <------ZmHOX2a(1)     --------->AHL20(2)   gtacaaacctataccagcaccagtctccatttctgcaaacactgatttaaaaaaaccatcaactaggatatgataaatagatgcaaaaaaaattgatagc  25792400                             --------->At5g28300                      <---------ARR14(2)           <-                            ----------->GT1       <---------MYB52(1)  --------->ARR14(2)  <------ZmHOX2a(1)              --------->ANAC46                  <---------ANAC46      --------->GLK1(2)   ===========              --------->ANAC58                  <---------ANAC58--------->ARR14(2)     <---------ICU4 -------At4g35610       <---------ZAT14         <---------ANAC58--------->GLK1(2)   --------->WOX13(1) ------>At4g35610       --------->ZAT18   <---------TOE2(3)     <---------ARR14(2)<---------AHL20(2) ----At4g35610--------->ANAC58           ---------->DOF2 <----------ID1           --------->AHL20(2)<   agctaaaaaaactcacaagcaaattgcacactgtaacaaaaactaaagtttcgttttttaagacaaaatccgaatcggagacatataaatcaggacacca  25792500                                ------>MYB46(1)                ----------->GT1 ------>MYB83  <---------GLK1(2)--------->ANAC58               ----------->GT1--------->MYB46(3)           --------->YAB1         ---------->DOF2      --------->AtMYB61--------->GLK1(2)           <-----------GT1      --------->AHL20(2)   --------->ANAC46   --------->ARR14(2)     <---------ATHB12 --------ARR11(3)         <-------TEIL        <---------ARR14(2)<<<<<<<<<<<<<<<<<LFY ======HOX2a_HOX2a    <-------TEIL        --------->At4g35610  --------->ANAC58      --------->ANAC46 ------ZmHOX2a(2)  --------->GLK1(1)      <---------At4g35610---------->DOF2  <---------ICU4   agatcgaattaaaaagaagggaaatacatacaccaatcgaattcagaagaatcgctcaaaatcaaaagccaatggtttcactattacacaaaaaacaaaa  25792600                                                                               <---------AHL20(1)                                                                          --------->AHL20(2)                                                                          --------->AHL20(1)                                                                          <---------AHL20(1)                                              --------->ANAC46           --------->YAB1                                         --------->WOX13(1)         --------->TOE2(3)                 <----------DOF2        <---------ICU4             <---------ANAC55(2)              -            --------->YAB1             <---------YAB1              ----------->GT1    <<<<<<<<<<<<<<<       <---------AHL20(2)              <---------ATHB12       --------->AHL20(2)--------->AHL20(2)  -       --------->AHL20(2)              --------->ICU4         --------->YAB1   --------->AHL20(1)<---   tgtagagattaaaatgatactttcactgtttcacagagctaatcattcacgtagatgaatacaataaaaacgtaaatataatatatatacacattggttt  25792700              <-------TEIL             --------->GLK1(2)             --------->CCA1(2)            --------->ARR14(2)            <---------ARR14(2)           <---------GLK1(1)               ---------->DOF2           <---------HSFB2a(1)            <------ZmHOX2a(1)          ----------->ARR10  ---------->DOF2                                      --------->ATHB12         <------ZmHOX2a(1)   --------->MYB52(1)                                ----------->GT1 -------->TOE2(3)          --------------->AGL15                              --------->DAG2 <<LFY<-----------RAV1(2)  <---------------AGL15                             ---------->DOF2       -- -------->TOE1(3)         ----------------->AGL1                         --------->At4g35610  *TSS<-- --------GT1--------->ARR11(1)      <------ZmHOX2a(1)                 ---------->DOF2      --------->MYB52(2)   aaccttacacaggagattcgaagaagtaacccaaaggaggaagaggaaagaagatgtgaatgaagtaggcgaagaagcagaaagtgattagattagttgg  25792800                                                      --------->WRKY12                                                      <---------ZAT14                                                      --------->ZAT14                                      --------->AHL20(2)                                      <---------AHL20(2)                                      --------->AHL20(1)                                     --------->AHL20(2)                                             <                                     <---------AHL20(2)  ------------>CBF                           -                            <----------DOF2           --------->WRKY38(1)                           <                         <---------AHL20(2)           <---------ZAT18                            ----                     <---------AHL20(2)            <---------ANAC46                            ------                     --------->AHL20(2)     <---------YAB1    --------->YAB1            --------->HSFB2a(2)                 <----------DOF2  <---------AHL20(2) --------->ALFIN1                   <---------HSFB2a(2)       <----------DOF2   <-----------GT1   <-----------GT1   <---------ATHB12       <----------DOF2 - ------->ATHB12---------->ID1     --------->AHL20(2)<---------At4g35610        ---------->DOF2 ------ -------YAB1  <-----------GT1  --------->YAB1   --------->AtLEC2        <---------AHL20(2)    -------   atgattaggctttgtttttctttttaattacttttataaattaattatccatgcagtggaccaatgaaaacgatttttttaaaaagctttctacaaaaat  25792900                       --------->ZAT6                        --------->ANAC58                <------NtERF2                                --------->ANAC58               <---------RAP2.6(3)                          <---------TOE1(2)              >>>>>>>>>AtERF-3                              --------->SPL7              ----------->GT1--------->MYB46(3)     <---------ZAT18              --------->RAP2.6(2)                   --------->ZAT18              --------->RAP2.3(3)                 --------->ARR14(2)--------->ANAC46              --------->RAP2.3(2)                 <---------ARR14(2)------>MYB83 ---------AHL20(2)   <--------ATHB1--------->ARR14(2)     <---------SPL7          --------->ZAT6 -------->AHL20(1)   --------->YAB1<---------ARR14(2)     --------->TOE1(2)  --------->TOE2(3) ---------AHL20(1)  <---------ATHB12              <---------PCF5------->TEIL --------->TOE1(3) ----->YAB1   >>>>>>>>>AtERF-4  --------->ANAC58 <---------ANAC58   --------->ANAC58 --->AHL20(1) --------->DEAR3(1)--------->ANAC58 <---------ANAC58--------->MYB46(3) -------->AHL20(2)  <---------ATHB51     ------->TEIL <---------At4g35610    --------->YAB1 --->AHL20(2)--------->RAP2.3(1)<---------ANAC55(2) --------->SPL7  --------->ANAC58 -->YAB1 ----------->ARR10  -------->P--------->ANAC46<------NtERF2 ------>MYB46(1)   ---------->DOF2   aataaaatggtgagagccgtcaataatactaaccacgtatacgaaccatttgggtccgctcgtacgaaccaagccaaaaccataactctaaagaaaccaa  25793000                                        <---------YAB1                                      <---------CCA1(2)                                     ------>ZmHOX2a(1)                                  <---------YAB1                            <---------AHL20(2)                            <---------YAB1                           --------->YAB1 <----------DOF2                           --------->AHL20(2)               <----------DOF2                     ------>MYB83<-----------GT1    --------->AHL20(2)                     ------>MYB46(1)--------->TOE2(3)    <---------AHL20(2)                  --------->MYB46(3)--------->TOE1(3)    <-----------GT1                <---------TOE2(3)                <-----------GT1<---------YAB1       <---------AHL20(1)                  <---------TOE1(3)       <-----------GT1     <---------AHL20(1)       <---------AHL20(2)             --------->GLK1(2)   aattgtgttttacattttgaaccatccaatattattatccttatctttatccattttattttctttttcagtttaagtatatcagactctgaggtttgca  25793100                                                                                          --------->AHL20(2)                                                                                     --------->LBD16                                                                                   <---------LBD16                                                                                 ------>MYB83                                                                                 ------>MYB46(1)<----                                                                                 --------->MYB52(1)                                                                                 --------->ARR14(2)                                                                          --------->AHL20(2)   ------                --------->ARR11(3)                                    --------->AHL20(2)  <---------AHL20(1)                <---------ARR11(3)               <---------YAB1       <---------AHL20(2)  <---------AHL20(2)           --------->AHL20(2)                 <---------ARR14(2)     --------->AHL20(2)   --------->AHL20(1)          <---------ATHB12              <-----------GT1      <-----------GT1<-----------GT1    <-----        ------>MYB46(1)               <---------AHL20(2)   <---------AHL20(2)    <---------ARR14(2)        ------>MYB83       --------->YAB1     --------->ARR14(2)----------->GT1<---------MYB59<------   gtagataaccaaatgaattatcttctaaatcaaaatcgatttaaaccgaatactatagaatttaaaccgtataaaattaaaccgaaccggaataaattac  25793200                                                                                                  ---                                                                            --------->ANAC46      <--                                                                          --------->ANAC46        <--                                                                     <---------ARR14(2)           ---                                                                     <-----------ARR10      ---------                                                                     <---------ARR11(1)     <--------                                                                     ------->TEIL           <--------                                                                     --------->ARR14(2)     <--------                                                                     --------->GLK1(2)      ---------       --------->LBD16                                        <-----------RAV1(2)           ---------      ------->GAMYB                                           --------->HSFB2a(2)           ---------     --------->MYB46(3)                                       <---------HSFB2a(2)      <------NtERF2-   <---------ALFIN1                                          ------>ZmHOX2a(2)        <-----------HVH21 -----LBD16                                                 <------ZmHOX2a(2)         ------>NtERF2<- --->MYB52(1)                                      *TSS    <---------ARR14(2)        <---------ANAC46 ----At5g28300     <---------ZAT6           ------->TEIL   --------->ARR14(2)      ------>NtERF2 <--- -----GT1    <---------YAB1        <-----------HVH21  --------->ALFIN1   <---------REM1(2)  <--------   cggctcaaccgcgagattatagtgtcattctctccagtttcagacgaatcgatggagttgggatccagacgaatctacacgacgatgccgtcgaagctcc  25793300  Previous    Next  AGI:  At5g64460.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G58280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67833.1); contains InterPro domain Phosphoglycerate mutase (InterPro:IPR013078) Range:  from: 25790075    to: 25792794    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g64470.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G14530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67844.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 25793251    to: 25795189    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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