Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------->AHL20(2)     <----------DOF2                            <-------GAMYB --------AHL20(2)   <-------TEIL                                <---------MYB46(3)             ------ ----AHL20(2)   <---------TOE2(3)                       <---------YAB1                     <------ZmHOX2a(1) ------TBP      <---------------AtSPL8  ===============================HOX2a_HOX2a  <----------ID1--- --->AHL20(2) ---------->DOF2           ------>ZmHOX2a(1)       ------>ZmHOX2a(2) ---------->DOF2---- ----TBP   <---------ZAT6         ------->TEIL --------->ETT(2) ==================================HOX2a_HOX2a   tataatttcgctagtgtaaaggtactttgaaatatgaatttcctcgatgtcgaaagttatgtttgatcgttgaatttgatgcgaaaaagacgaggaagaa  25765700                                          --------->HSFC1(1)                                          <---------HSFC1(1)                          <---------ARR11(3)       <---------TOE1(2)               <---------AHL20(2)           ----------->GT1--------->ARR11(3)       <---------TOE2(2)              --------->AHL20(2)           --------->ANAC58<---------CCA1(1)  --------->GLK1(2)                --------->ATHB12           --------->ANAC55(2)            <---------HSFB2a(2)           --------->MYB52(1) --->YAB1  --------->ANAC58<---------RVE1(1) <---------GLK1(2)      <---------AHL20(2)      --------- ------>ATHB12    ---------->DOF2         --------->HSFB2a(2)      <---------AHL20(2)       --------- ----->ICU4<---------ANAC55(2)       <----------DOF2<---------YAB1 --------->AHL20(2)       <--------   tgatttgagggataagtaacaaaagtcagatattttgggcttttctagaatcttatgtttgggcccaaattaaataacggatgatttaatggataagtaa  25765800                                    <---------TOE2(2)                                    <---------TOE2(3)                                             <--                                    <---------TOE1(2)                             <---------RVE1(1)                               <-----------ARR10                                  <---------CCA1(1)                           <---------HSFB2a(2)                       --------->ATHB12             <--                           --------->HSFB2a(2)                     <---------WOX13(1)             ---   ---------->DOF2   <---------ANAC58                            --------->ATHB12--------->ARR11(3) >ANAC58             <---------ANAC58      <----------ID1 --------->MYB52(1)     <---------ARR11(3) >ANAC58      --------->ATHB12 --------->GLK1(2)    --------->AHL20(2)      <-----------HVH21 <------ -ANAC55(2)<---------GLK1(2)  <---------GLK1(2) --------->ICU4  <---------YAB1 ----------->ARR10  ---   gtagcaaaagtcagattgtttgggcttatctagaatcttaggtttgggccaaaattaaaacaacggatgattgatggaggtcagatatttttgggtcttt  25765900                                                                                                    <       <---------TOE2(3)                                                                        -----       <---------TOE2(2)                                                                       <-----       <---------TOE1(2)             <---------ARR14(2)                               <---------TGA1a  <-----------ARR10                  --------->ARR14(2)                               <---------O2  <  --------->GLK1(2)             ------->GAMYB                                         --------->ANAC58 <---------GLK1(2)             <---------ANAC55(2)                                    --------->ANAC58 -------HSFC1(1)               --------->ANAC55(2)                                    --------->O2  < -------HSFB2a(2)            --------->MYB52(1)                      --------->MYB46(3)     --------- ------>HSFC1(1)         <---------AHL20(2)                        --------->ANAC46   <---------ANAC55(2) ----DOF2               --------->AHL20(2)              <-----------GT1               --------->TGA1a ------>HSFB2a(2)       <---------AHL20(2)     ----------->GT1     XXXXXXXXXXXXXXXXXXXX>MIR841 ------   ctagaatcttaggtttgggtcaaaaattaaataacggaatatttgctagttgtaaaattatcgacttacaaaccacttaaaaacagacacgtctacatat  25766000                                                   ------>NtERF2                                                  --------->DEAR3(1)                                                <---------ATERF1(1)                                               --------->DEAR3(1)        <---------WRKY18(1)                   <------------MYB.PH3(1)     <---------ANAC58                         --------->MYB46(3)     <---------ANAC58                       <-----------GT1     <---------ANAC46                  ----------->TBP <-------MYC3                          <---------YAB1 ------->MYC3                          --------->AHL20(2) ---------O2                        ------>ZmHOX2a(1) ---->CCA1(2)                      --------->TOE2(3)   --------->ANAC46 ----ARR14(2)                      --------------->AGL15     <-------MYC3 ---------ANAC58                 ---------->ID1------->GAMYB ------->MYC3    <----------DOF2 ---------ANAC58                <-----------GT1--------->ANAC46      <----------DOF2 -->TBP----------->HVH21   <---------AHL20(2)<---------At5g28300  *TSS       <---------DAG2         < --->ARR14(2)             <---------AHL20(2)--------->MYB52(1)--------->ALFIN1                      <   acgcgtggcttgacctcgactccagttttttatttttccttataaataaccgcctccacaaaacgtggtcgcttaatagctttttttgtattctctccat  25766100                           <---------CCA1(2)                          ------>NtERF2                         --------->RAP2.3(3)                         --------->RAP2.3(2)                         --------->DEAR3(1)                        --------->RAP2.3(1)                    <------ZmHOX2a(1)                        --------->DEAR4(2)                  <-----------RAV1(2)                       --------->ABI4(1)                    <---------LBD16                     <----                       ------>NtERF2                     <---------At4g35610                   <-----                      --------->ANAC46                   --------->At4g35610                   <-----                      --------->DEAR3(1)                 --------->ZAT2                        ------                     --------->MYB46(3)              --------->DEAR3(1)                  <---------YAB1                    <---------At5g28300             <------NtERF2                     ---------------              <---------ANAC58                    <---------DEAR3(1) --------->DAG2  ----------------              <---------ANAC58                   --------->ATERF1(1)---------->DOF2  <--------------- ---------ANAC58   <-----------GT1              <-----------HVH21----------->GT1  <----------DOF2---- ---------ANAC58 <-----------HVH21      --------->YAB1   <---------ZAT2     <----------DOF2    ------   ttgcttaatctcattttcgtttcaccgccgtctctctctatatcaaaatgggtcgccgtagctcaggaggtaaagtttctttctctttccgattatagat  25766200                                                                                       <------ZmHOX2a(2)                                                                                      <---------ARR14(2) --ZmHOX2a(2)                        <---------TOE2(3)                                --------->AGP1 ----ARR11(3)                    --------->DOF5.7(2)                                  --------->ARR14(2) ----AGP1                       --------->TOE2(3)                           <---------CCA1(2) --->AGP1                      <---------ANAC46                            --------->REM1(2) >AGL15                        ----------->GT1             --------->MYB52(2)      --------->DEAR3(2) ->AGL3  --------->GLK1(2)   <---------TGA2(2)            <-------TEIL  <---------ANAC58 --AGL2 <---------GLK1(2)   ----------->TGA1           <---------ANAC58 <---------ANAC46 -->ZmHOX2a(2)            ----------->bZIP910(2)<---------AtMYB61     <---------YAB1--------->DEAR3(1) --->ARR11(3)       <---------LBD16 <-----------GT1    <---------ANAC58 <---------ANAC58   ctatctgtccgattctattgactctggatgatgacgttaaacgttttgttttggtttgggttcgtttcgattatgcgtgtatcgcaccgatctagggttt  25766300                                                                   <---------------AGL15                                                                   --------------->AGL15                   --------->ARR14(2)                   <------MYB83           <---------DAG2                               <------MYB46(1)          ----------------->AGL1                     <---------ANAC58                <---------YAB1         ===========================================================================MADS_MADS         <-----------------AG              <---------TOE1(3)      ----------------->AG    --------->ATHB12        <-----------GT1        --------->AHL20(2)    <---------ANAC58    <---------HSFB2a(2)   <---------YAB1  <---------ARR14(2)      <---------TOE2(3)      ----------------->AGL1 XXXXXXXXXXXX   accttgttattgaccttatcggatattagataatcaaatattcttaaggtattaggcttggtttagtttccaattcgagacatggttgtcattgatttca  25766400                                                                              <---------ALFIN1                                                                        ------>ZmHOX2a(2)                                                                        ==========================HOX2a_HOX2a                                                                       <------ZmHOX2a(2)                                                                       ===========================HOX2a_HOX2a                                                                       --------->CCA1(2)                                                                      --------->ARR14(2)           <-                                                                      <-----------ARR10           ---                                                                      <---------ARR14(2)       ------                                                                      --------->ARR11(3)       ------                                                                      <---------AGP1           <-----                                                                      <---------ARR11(3)       <-----                                                                      --------->ARR14(3)      <------                                                  <-----------GT1     --------->AGP1        <--------                      <---------ANAC46         <---------ICU4         <---------ARR14(3)    <--------                      <---------ANAC58--------->ARR11(3)            ----------->ARR10      ------>ZmHOX2a(1)               --------->AHL20(2)    <---------CCA1(2)            =============HOX2a_HOX2a <--------- XXXXXXXX>MIR397B     <---------ANAC58<---------ARR11(3)          <------ZmHOX2a(1)--------->DEAR3(1)   ttgttgatgtcaaaaaaaaaaattccttgtttttgtgatatatctctcattttgacttcatttgtgcaggaagatctgcccctcgccctcgtcctgctgc  25766500           --------->ARR14(2)     <---------At4g35610     --------->At4g35610     ------>NtERF2     --------->ZAT2     <---------ZAT2    --------->DEAR3(1) --------->ANAC58 --------->ANAC46 --------->ANAC58                                                                                   - --------ALFIN1                                                                                     < ------>ZAT14                                                                                       < --->At4g35610        --------->TOE1(1)                                                             - --->ZAT2 --------->At4g35610                                                                       - ----At4g35610     ----------->RAV1(2)                                                             -- ----ZAT2 <---------ZAT2                                                                           <- -----RAV1(1)  ------>ZmHOX2a(1)         --------->LBD16                                           <- -ZAT2    --------->ZAT2                --------->ANAC46            <---------YAB1      --------->At4g35610 -At4g35610<---------ARR14(2)--------->ARR11(3)                   <---------ICU4        <---------At4g35610 --RAV1(1)<---------At4g35610<---------ARR11(3) <XXXXXXXXXXXXXXXXXXXXMIR863-3P          --------->LBD16   tgcacgcagcccagctcctcaacctggtacaaatctttgtctccgaaattgtgtttttttgctcttagttatgacttattcaatccattccgctggattc  25766600  Previous    Next  AGI:  At5g64400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09570.1); similar to unknown [Populus trichocarpa] (GB:ABK94558.1); contains InterPro domain CHCH (InterPro:IPR010625) Range:  from: 25766066    to: 25767615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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