Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->DAG2          ---------->DOF2                                         <---------ANAC46     <---------At4g35610  ----------->HVH21                                 --------->ATHB12             <------ZmHOX2a(1) ----->ZmHOX2a(1)                                ---------->DOF2  <---------ANAC58 <-----------RAV1(1) -----ARR14(2)                     <---------ANAC55(2)   <---------ANAC58<---------ZAT2--------->At4g35610 ---->ARR14(2)                  -------->P   --------->REM1(1)    <---------ANAC58--------->ARR11(3) --->GLK1(1)      --------->ARR14(2) ----------->HVH21   <---------ANAC58<---------At4g35610 ----GLK1(1)      <---------ARR14(2)--------->LBD16<---------ATHB12      --------->At4g35610   tcctctgatggaaaaagagggatactttcgatacaacccgtgaagcttcaccaaagattgcctctgtttcttgggagcttagaggatgttgctgagctag  25760200                           ------->TEIL                         --------->ZAT14                --------->ZAT2                <---------At4g35610                --------->At4g35610                <---------ZAT2               ----------->RAV1(1)                                                 <---------AHL20(2)             --------->ZAT18                  <-----------GT1          ----------->GT1   ------->TEIL            --------->ALFIN1            ----------->GT1------>ZmHOX2a(1)           --------->AHL20(2)   agagctatggagatgtgcagcagactgtgaaccctggctatgaagtttaaacaactcctctgtttcatattatctgtaaaaacaataaatgaatcgatgt  25760300                                                  --------->ARR11(3)                                            --------->REM1(2)                                          --------->LBD16                                         <---------ANAC58                                         <---------ANAC55(1)                                         <---------ANAC55(2)                                         <---------ANAC46                                         <---------ANAC58              <-----------GT1          <------ZmHOX2a(2)         <---------ANAC58             --------->ARR14(2)         <---------ANAC58             <---------ARR14(2)         <---------ANAC46             --------->AGP1                    <------ZmHOX2a(2)      <--------P                    ----------->ARR10                  <---------ARR11(3)     <---------ANAC58               --------->MYB59                    --------->ARR11(3)     <-------GAMYB            ---------->DOF2     <---------ARR11(3)   --------->ARR14(2)     <---------ANAC58        <------ZmHOX2a(1)   <---------CCA1(2)     <---------ARR14(2)    <------MYB83             ==================HOX2a_HOX2a        <-------TEIL        --------->YAB1    <---------MYB46(3)       =================HOX2a_HOX2a        --------->CCA1(2)    <-----------GT1    <------MYB46(1)  <---------ANAC55(2)<-------TEIL          <---------YAB1       --------->YAB1   <---------AtMYB61 --------->ANAC55(2)------>ZmHOX2a(2)   --------->YAB1    ----------->GT1<-------   tagatttggttgcttgtaacattatgtattaggaaagttagatccgtgtatatatctgtttatcaagattcaagatcgactggtataatcacaattcaca  25760400                                                                                  <---------MYB52(1)                                                                            <---------GLK1(1)                                                                      <-------GAMYB                                                                     --------->MYB111(1)                                                                     <---------MYB46(3)                          <---------ATHB12                           --------->MYB55(2)                     --------->ANAC58                              <---------ANAC58                   --------->At4g35610                             <---------ANAC58  <---------TOE1(3)                 --------->YAB1                                   <---------MYB46(3) <---------TOE2(3)      <---------YAB1 --------->ANAC58                        --------->AHL20(2)  <-------GAMYB ----GT1    <----------DOF2                         <---------ALFIN1 --------->MYB111(2)   agtttattatgtttctttatcagaagcaatctttcttcgatttctaacacagtcccactcccataaattggttgttagatttcggttaagtttagtaaga  25760500                                                     <---------GLK1(1)                                                     --------->GLK1(1)                                                     <---------RVE1(1)                            <---------MYB52(1)    --------->LBD16                           <---------RAP2.6(3)   <---------ANAC46                     <---------ANAC58       <---------AHL20(2)                              =========                     <---------ANAC58    --------->AHL20(1)                                --------->AtMYB61                  <---------AtMYB61  <---------AHL20(2)                                 --------->AtMYB61             --------->ANAC58        <---------ICU4 --------->ARR14(2)            <---------DOF5.7(2)             --------->ANAC58       --------->AHL20(2)                         --------->TOE2(3)            --------->SPL7 <-------GAMYB--------->AHL20(2)      --------->ANAC58  ---------->DOF2            --------->SPL1(2)     --------->YAB1<---------LBD16 --------->ANAC58--------->DOF5.7(2)          <---------SPL7  ----------->GT1<---------AHL20(1)   <------NtERF2    --------->TOE1(3)        <---------------AtSPL3   <---------AHL20(2) <---------ARR14(2)*TSS    <---------ZAT6---------   atttttaaaatcggtacggtatggtttgccgttaaataataaatatataatgcggatatttggcgcaagttagcaacttagcgttaaagaccaccaaaga  25760600                            <---------O2                            --------->O2                         =============MYC_MYB                         ------->GAMYB                         --------->DEAR3(1)                        --------->MYB46(3)                      --------->ARR14(2)                      <---------ARR14(2)                     <---------ARR14(2)                     =================bZIP_DOF                     --------->ARR14(2)                     ---------->DOF2                    <------NtERF2                   --------->LBD16                  --------->RAP2.3(2)                  <---------ANAC46                 <------NtERF2                 <---------LBD16                ------>NtERF2<-----------HVH21                <---------RAP2.3(1)               --------->ANAC46  <---------bZIP60(1)               <---------DEAR3(1)--------->bZIP60(1)            ---------->CDC5 <---------TGA1a                                    --------->TOE2(3)            ==========================MYC_MYB                                 <---------ANAC58           --------->At4g35610 --------->REM1(2)                              ----------->GT1           ------>ZmHOX2a(1)--------->TGA1a                                   <---------ANAC58           ----------->RAV1(2)----------->TGA1                                <---------ZAT6           <---------At4g35610----------->HVH21                --------->MYB52(1)         --------->AtLEC2 =====================================bZIP_DOF               --------->ARR11(3)--------->TOE1(3) ->DOF2  --------->ZAT18--------->DEAR3(2)              <------ZmHOX2a(1)     <---------ANAC46      -   cttctctcaagtcctctgcgccggaaaccgccgtgacgagattggagagggagagagaggagagataatggagcgaaatagcgttaaatttcatgcagag  25760700                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                    <---------HSFB2a(1)                                    --------->HSFB2a(1)                                   <---------ARR11(1)                                   <---------ARR11(3)                                   <---------ARR14(2)          <---------ANAC58         --------->ARR14(2)          <---------ANAC58         --------->ARR11(3)      --------->LBD16             <---------CCA1(2)    ===============================HOX2a_HOX2a    <---------LBD16               <---------ARR14(1)    ------>ZmHOX2a(2)        <---------ARR14(2)                               <---------ZAT2   ================================HOX2a_HOX2a                      --------->At4g35610   <------ZmHOX2a(2)         <---------GLK1(2)                      --------->ZAT2              -----   --------->CCA1(2)         --------->ARR14(2)                     <---------At4g35610       -------   --------->ARR14(1)        --------->ARR11(1)                     <---------ZAT2         <---------ANAC46  <---------ARR14(2)        ===============HOX2a_HOX2a             ------->TEIL            <---------ATERF1(2)  --------->ARR14(2)        ================HOX2a_HOX2a         --------->ANAC46           <---------DREB2C(2)  --------->ARR11(3)        <------ZmHOX2a(1)                   --------->ANAC58           --------->ATERF1(2)  --------->AGP1         <-----------RAV1(2)              <-----------HVH21   --------->At4g35610  --------->ARR11(1)    <-------TEIL--------->HSFC1(2) --------->ANAC58       --------->ZAT2 <------- --------->GLK1(1) <-----------RAV1(2)                 --------->ANAC58       <---------At4g35610<--- <---------GLK1(1)=================HOX2a_HOX2a ----------->GT1  --------->ANAC58           <---------DEAR3(1) ---------->ARR10 ------>ZmHOX2a(2)<-----------ARR10   --------->ANAC46--------->At4g35610<---------LBD16   aagagatccggagcgtttgatccaggttcaggattcggatcttccaagagggtcaaaacgcatcacacgcagctgctctcagctctggttgtgccggtgg  25760800                                                <---------WOX13(1)                                           <---------ANAC46                                          <---------DEAR3(1)                                         --------->SPL7                                         --------->ZAT14                                         <---------ABI4(1)                                         --------->ABI4(2)      <---------ANAC46                <---------MYB46(3)     ------>NtERF2                    <---------DEAR3(2)     <------NtERF2                   <---------At1g77200   <---------DEAR3(1)                <---------DEAR3(1)  <-------MYC3                       <---------DREB2C(2)                                       <-----  ------->MYC3                       <---------DEAR4(1)         --------->ANAC58               ------  <---------LBD16                  <-----------HVH21      --------->HSFB2a(2)               --------- ===================================bZIP_DOF--------->At5g28300 <---------ANAC55(2)        ------->GAMYB --------->ANAC58                 --------->ANAC46     <---------ARR14(2)                 <---------LBD16 --------->TGA1a                  --------->ANAC58     --------->GLK1(2)                 -------->P-- <---------O2                     --------->TGA1a      --------->ARR14(2)                --------->MYB52(1) --------->O2                     <---------O2<---------MYB46(3)--------->ANAC55(1)   <---------ATHB12 --------->ANAC58        <---------DAG2  <---------ZAT14  <---------HSFB2a(2)        --------->ANAC58 --------->ANAC46        <----------DOF2--------->ALFIN1 <---------LBD16             --------->ANAC58 <---------TGA1a         ===================bZIP_DOF   <---------ARR11(3)           --------->WOX13(1) ------>HVH21        ------>NtERF2<---------TGA1a      --------->ARR11(3)   --------->At4g35610<----- -->ALFIN1    <---------WOX13(1)  --------->ANAC58----------->GT1           <---------At4g35610------ --MYB52(1) <<<<<<<<<RAP2.2       --------->O2--------->ATHB12  --------->ANAC58 ----------->RAV1(1) ------PCF2<---------TOE2(3)  <-----------GT1 --------->MYB55(2)--------->ANAC55(2)--------->MYB46(3)   gacacgcggcgtttagattgctctgccctttatcacacgtcggtgcggtgattggaaaatctggaaacgtaatcaaacagctccaacaatcaaccggagc  25760900                 --------->DEAR3(1)             ==============================HOX2a_HOX2a             ===============================HOX2a_HOX2a    --------->ANAC55(2)    <---------ANAC55(2)   <-------TEIL<---------ATERF1(1)   <---------LBD16  --------->CCA1(2)  --------->ARR14(1)                 ------>ZmHOX2a(2) <---------ARR14(2)                 <------ZmHOX2a(2) --------->ARR11(3)            ----------------->AGL1 --------->ARR11(1)   <---------MYB52(1)<-----------HVH21          <-------TEIL --------->ARR14(2)   ----------->RAV1(2)                        --------->ARR14(2) ----At4g35610<---------ARR14(2)   <---------ARR14(2)            --------->ARR11(1) --->ZAT2    <------ZmHOX2a(1) <-----------------AGL1            <---------ARR14(2)     <---------ANAC46 >LBD16<-----------HVH21    <---------GLK1(1)                    <---------GLK1(2)      <---------ANAC58 --------->ARR10--------->ATERF1(1)--------->ARR14(2)       --------->ANAC58            <---------ANAC58 ----ZAT2 <---------HSFB2a(2)  <---------LBD16 <---------YAB1  ----------->ARR10       <---------MYB46(3) --->At4g35610--------->ARR14(2) --------->LBD16            --------->ANAC58  ----------->GT1    ----   taagatacgggtcgaggagcctccgtctgggtctccggatcgggtcatcacgataatcgcacaagcagattcgaaatcaagggtgaaattgggtgctaat  25761000                                                                                                <----                                                                                                -----                                                                                                <----                                                                                             <------NtERF2                                                                                           <---------ANAC46                                                                                          --------->At4g35610                                                                                          <------NtERF2                                                                                         <---------RAP2.3(1)                                                                                        <---------RAP2.3(2)                                                                                        <---------RRTF1(3)                                                                                        <---------RAP2.6(2)                              <------ZmHOX2a(1)                                         <---------DEAR3(1)                            --------->ALFIN1    ---------->DOF2       <---------TOE2(3)<---------At4g35610                       ---------->DOF2  <---------TOE2(3)             <---------TOE1(3)--------->At4g35610        --------->AtLEC2--------->DAG2  <---------TOE1(3)     <-------GAMYB       <----------DOF2 ----->YAB1     <------ZmHOX2a(1)<------ZmHOX2a(1)      --------->ANAC46--------->ARR11(3)<---------LBD16   aacaatggcaatgcagaaggagagaaaaaggaggaggaagttgaggtatctaaagcacaaggagcgttgattaaggtattcgagcttttagcggcggaag  25761100  Previous    Next  AGI:  At5g64380.1    Description:  fructose-1,6-bisphosphatase family protein. similar to fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative [Arabidopsis thaliana] (TAIR:AT3G54050.1); similar to chloroplast fructose-1,6-bisphosphatase II [Fragaria x ananassa] (GB:ABW38331.1); contains InterPro domain Inositol phosphatase/fructose-1,6-bisphosphatase; (InterPro:IPR000146) Range:  from: 25758475    to: 25760424    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g64390.1    Description:  HEN4 (HUA ENHANCER 4); nucleic acid binding. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G09560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64753.1); contains InterPro domain K Homology; (InterPro:IPR004087); contains InterPro domain K Homology, type 1; (InterPro:IPR004088) Range:  from: 25760570    to: 25764774    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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