Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->AHL20(2)                       <---------AHL20(2)                      --------->YAB1                   <---------ICU4                  <---------ATHB51                  --------->ICU4                                                                    <                  <---------AHL20(2)                                                               --                  --------->AHL20(2)                                                               <-                 <---------AHL20(1)                                                              <---                --------->YAB1                                                                -------            --------->TOE2(3)          --------->AHL20(2)                                    <-------MYC3       --------->AHL20(2)            --------->TOE2(3)                ---------->DOF2        ------->MYC3       <---------AHL20(2)      --------->ANAC46                   --------->YAB1      <---------ZAT18   <---------AHL20(2) --------->AHL20(2)                      ---------->DOF2         --------->ZAT18  --------->AHL20(2)  <---------AHL20(2)--------->AHL20(2)--------->DAG2              --------->WRKY38(1) --->GT1<---------AHL20(2)   --------->ANAC46           ---------->DOF2              --------->ALFIN1   aatataaaatttaatctaaaataattaaaatacacaatacattaaaaaaaaaaaactcaaaaggcaaagcataaaagaagaaacagagtggaccatgtgt  25738800         ---------->DOF2        --------->AtMYB61       --------->MYB46(3)  --------->ALFIN1 <-------MYC3                                          ----------->GT1                         ------ ------->MYC3                                   <----------ID1 <---------ICU4                  ------ --------->LBD16                                ----------->GT1--------->YAB1------->GAMYB <--------- ---------ANAC46                                --------->ANAC58            --------->MYB46(3) ------ ------->LBD16        <-----------GT1           --------->ANAC58           --------->RAP2.6(3) <----- -----NtERF2<---------HSFC1(2)         --------->ATHB12<----------ID1     --------->MYB52(1)   ------ ------LBD16--------->HSFB2a(1)       <---------AHL20(2)     --------->ARR11(3)           --------->WOX13(1) ---->HVH21 --------->HSFC1(2)  <---------MYB52(1)   ---------->DOF2 ----------->RAV1(1) <-------TEIL   ccgcgtggaaccaaagcttccaaataactcgaccgtttagtttattggaaacgaaaaaagaaaaatcatggcaacacaacggccataaacatccatcacg  25738900                                                                       ---------->DOF2                                                                      <---------WRKY38(1)                                                                      <---------WRKY45                                                                <---------ANAC46                                                                --------->DEAR3(1)                             --------->GLK1(2)                 <------NtERF2                 <-------                            <---------ARR14(2)             <---------DOF5.7(2)              <--------                            --------->ARR14(2)           <---------MYB52(1)               --------->LBD16      --------->MYB52(1)  ----------->ARR10       ---------->DOF2     <---------WRKY12   ------->GAMYB --->ANAC58        --------->SPL7         --------->ZAT2 --------->DOF5.7(2)            --------->MYB46(3) --->ANAC58      <---------SPL7           <---------At4g35610  --------->RAP2.3(1)     ------>MYB46(1) --HVH21      <------------------SPL14    --------->At4g35610 <---------ZAT18          ------>MYB83 --->ANAC46 <---------ALFIN1<---------GLK1(2)<-----------HVH21--------->ZAT18          -------->P  <- ----ANAC55(2)--------->ANAC58            <---------ZAT2<---------RAP2.6(3)           <---------ALFIN1 --->ANAC55(2)--------->ANAC58       ----------->HVH21  <-----------HVH21             --------->MYB52(1)   cgtctactaaacgaacacgcgtacggtccagattctcaaatgacagctgtcatagagccgttagcgccgtagtcaaagggtttaagcccaaccgcgtttc  25739000                                      <---------MYB52(1)                                     <---------RAP2.6(3)    <---------DAG2                            --------->ARR11(3)     <------MYB46(1)                                  -                            <---------ARR11(3)     <---------DEAR3(2)                 --------->ANAC46                            <-----------ARR10      <------MYB83                     <-----------GT1 <    <-----------GT1   --------->YAB1<---------MYB46(3)      <----------DOF2    <---------YAB1  ------ --CCA1(2)<----------DOF2  --------->RVE1(1)      --------->MYB59          <-----------HVH21  ------- ----------------ANAC81    --------->CCA1(1)      <---------DREB2C(2)  --------->MYB52(1)  <---------ALFIN1 ---------DOF2<----------DOF2     <---------At4g35610   ------>ZmHOX2a(1) ------->GAMYB --------->ZAT14   tctttttcacctctttcttttgtagcataatatctcagccgttagatttaagtcggtccttactttttcatatcaacggtcacgattcactaaacacctc  25739100        --------->ANAC46        --------->ANAC58        --------->ANAC58       --------->SPL7                                      *TSS       ------->TEIL                   --------->AtMYB61 <---------DOF5.7(2)     <---------ZAT14         ---------->DOF2          --------->DOF5.7(2)     --------->ZAT14    <---------------AGL15        --------->TOE1(3)     <---------ZAT18    --------------->AGL15        --------->TOE2(3)                        -------   --------------->AtSPL8 ----------->TBP           <---------ANAC46  --------->ANAC58   <----------- -------->ZAT14        <-----------------AGL3 <---------TOE2(2)       --------->ANAC58   ------------ ---------ZAT14        ============================================================================== ------>CBF            ----------------->AGL3------>ZmHOX2a(1)      ---------->DOF2     ------------- -->TOE2(3)<---------ALFIN1 <---------AHL20(2)<---------TOE1(2)  ----------->RAV1(1)    -------------   aatacagtgtaccccacttcttctctctatataaagaacaccatctcctaggtttcgttaacaacaacaacaaagcaaaaacactcccaaaccaaaaaaa  25739200         ----------->GT1    >>>>>>>>>TBF1 >>>>>>>>>TBF1 --->DOF2--------->At4g35610                                                                     <--- ----AGL15                   <----------DOF2         <---------CCA1(2)                         <----- --->AGL15          ------->TEIL             <---------DAG2         ---------->ID1 <----------DOF2 ====MADS_MADS      <---------ARR11(1)       <----------DOF2      <---------MYB46(3)  <---------YAB1 ---->AGL3         <---------CCA1(2)        <---------ANAC58    ----------------------->TaNAC69(2) ---->AGL2         <---------GLK1(2)        <---------ANAC58  <---------ZAT6     <----------DOF2 ----   gaagaagaagaagctaaattcgaatctctctcttttttgaaatatggctttttccaaatctctagtgtttgttcttctcgctgctcttttgatttcttcc  25739300                                                           ------>NtERF2                                                   ----------->HVH21                                                 <------ZmHOX2a(2)                                                 --------->GLK1(1)                                                 <---------GLK1(1)                                                 ====================HOX2a_HOX2a                                --------->O2    --------->ARR14(2)                                --------->TGA1a <-----------ARR10                               -----                     <---------At4g35610        --------->ARR11(3)                              -----                     <---------ZAT2   <---------TOE2(2) <---------ATERF1(1)                     <----                     --------->At4g35610  --------->ETT(2)--------->ARR14(2)                   ------                     --------->ZAT2  <------NtERF2===================HOX2a_HOX2a            ------>ZmHOX2a(1)                   <---------ALFIN1<---------DEAR3(1)  --------->DEAR3(1)                 -----------              ------>NtERF2     <---------O2    ------->TEIL  <-----------HVH21        <---------At4g35610 --------->ALFIN1------>NtERF2  <---------TGA1a <---------ARR11(3)                    ------>ZmHOX2a(1) ------ZAT14  --------->LBD16 --------->MYB52(1)<---------ARR14(2)                  ----------->RAV1(2) ----LBD16    <---------ATERF1(1)<-----------HVH21------>ZmHOX2a(2)       --------->At4g35610 <------ ----->LBD16<---------LBD16 <---------MYB52(2)  <---------AGP1------>ZmHOX2a(1)  <---------At4g35610   gcagtggctcaatctccggctccagctccatctaacgtcggaggtagacggatctcaccggctccttcacctaagaagatgactgctcctgctcctgcac  25739400                                                                    <------NtERF2                                                                   <---------ATERF1(1)                                                                   ------>NtERF2                                                                   --------->ABI4(1)                                                                  --------->ANAC46                                                                  <---------ATERF1(2)                            --------->RAP2.3(2)                   --------->RAP2.3(3)                            --------->RAP2.6(2)                   --------->DEAR3(1)                           --------->RAP2.3(1)                    --------->RAP2.6(2)               -                          --------->At4g35610                     --------->RAP2.3(2)               -                          <---------At4g35610                    --------->DEAR4(2)         <--------                          <------NtERF2                          --------->ERF1             ------>NtERF2                          --------->ZAT2                         --------->ATERF1(1)       ----------                          <---------ZAT2                         --------->RAP2.3(1)       --------->WRKY38(1)                          <---------ATERF1(1)               --------->AtMYB61              --------->WRKY12                         <---------ATERF1(1)             <---------ALFIN1                <---------At4g35610                       <---------MYB52(1)         --------->At4g35610                  --------->MYB46(3)      <-----------GT1 --------->LBD16      --------->ARR14(2)    --------->ORA47(2)   ------>MYB83 -- ---->At4g35610       <-----------HVH21    --------->GLK1(2)<---------ALFIN1          -------->P   -- ------>RAV1(2)       ------>NtERF2        <---------ARR14(2)  --------->DEAR3(1)     ------>MYB46(1) -----At4g35610      --------->ANAC46     <---------GLK1(2)--------->MYB46(3) <---------GLK1(2)   <-- ->TEIL             <---------LBD16     --------->LBD16 --------->MYB46(3)<---------ZAT2 --------->At4g35610 >RAV1(2)       ------>ZmHOX2a(1)--------->WRKY38(1)  --------->REM1(1)   <---------At4g35610     --- ---ALFIN1------>ZmHOX2a(1)--------->ATERF1(1) ------>ZmHOX2a(1)<---------ATERF1(1)  ------>ZmHOX2a(1)   ctgaagtttctccttctccttctccggcagccgcattgactccagaatcctctgcttcaccaccatcgccgcctctagctgattctcctaccgctgactc  25739500                                                                 --------->RAP2.3(1)                                                                 --------->ATERF1(1)                                                                 --------->DEAR4(2)                                                                 <------NtERF2                                                                ------>NtERF2                                                                <---------ATERF1(1)                                                                --------->ABI4(2)                                                                <---------RAP2.3(1)                                                               --------->RAP2.3(2)                                                               <---------DEAR3(1)                                                              <------NtERF2                                                              <---------ABI4(2)                                                              --------->RAP2.6(1)                                                              --------->ATERF1(1)                                                              --------->RAP2.3(1)                                                              --------->RRTF1(1)                                                              --------->ORA47(2)                                                             <---------ORA47(2)                                                             <---------ERF1                                                             <---------DEAR4(2)                                                             <---------RAP2.3(1)                                                             <---------ATERF1(1)                                                             <---------RAP2.6(1)                                                             <---------DEAR3(2)                                                             ------>NtERF2                                                             <---------RRTF1(1)                                                            <---------RRTF1(2)                                                            <---------DREB2C(2)                                                            <---------RAP2.3(2)                                                            <---------RAP2.3(3)                                                            <---------RAP2.6(2)                                                            --------->ALFIN1                                                            <---------RRTF1(3)                     --                          --------->ARR14(2)                <---------DEAR3(1)                <------ZmHOX2a(2)                          <---------ARR14(2)               --------->RAP2.6(3)               <-------                          <---------GLK1(2)            ---------->CDC5                       <-------       ---------->ID1=====================================HOX2a_HOX2a                        --------   <----------DOF2   ===============================HOX2a_HOX2a--------->RRTF1(3)           <-------- ----->NtERF2        ------>ZmHOX2a(2)              <---------ZAT2                        <---------ANAC46 -------->LBD16     ================================HOX2a_HOX2a--------->DEAR3(1)        <---------LBD16 -ATERF1(1)         <---------GLK1(1)               --------->ZAT2            --------->ARR14(2)  --- ->HVH21     <---------At4g35610                    <---------At4g35610   <XXXXXXXXXXXXXXXXXXXXMIR417 ------->ANAC46     --------->GLK1(1)        ------>ZmHOX2a(1)--------->DEAR4(2)       --------->ARR14(2) ------->LBD16      <------ZmHOX2a(2)      ----------->RAV1(2)--------->ERF1  <---------GLK1(2)------ -------LBD16----------->RAV1(2)        <---------At4g35610<---------ABI4(1)  <---------ARR14(2)<---- ------>LBD16--------->At4g35610 ------>NtERF2     ------>ZmHOX2a(1)<---------MYB52(1) <---------ARR14(2)   cccggctttgtctccatctgcgatctccgattctccgactgaagctcctggtcctgctcagggcggcgccgtttcgaacaaattcgccagtttcggatct  25739600    --------->ARR14(2)    <---------MYB52(1)                                                               <---------ARR11(3)    <---------ARR14(2)                                                               --------->ARR11(3)   <-------GAMYB                                                                     --------->AHL20(2)  <---------MYB46(3)                                                                 <---------AHL20(1) <---------RAP2.6(2)                                                               --------->ARR11(3) <---------ANAC46                                                                 <<<<<<<<<RAP2.2 <---------DEAR3(1)   <---------MYB52(1)                                     <---------YAB1 ---------->AtMYB77 <---------ANAC46                  --------->HSFC1(2)   --------->AHL20(2) --ARR14(2)        ----------------->AGL1             <---------HSFC1(2)   <---------AHL20(2) --AGP1<---------YAB1<---------RAP2.6(3)          <---------ATHB12     <---------AHL20(2) ->ARR14(2)       ------>NtERF2                 --------->WOX13(1)     --------->AHL20(2) -CCA1(2)      --------->At4g35610            <---------ATHB12        <---------AHL20(2) ------>ALFIN1 --------->ZAT2                 <------ZmHOX2a(2)   <---------AHL20(2) --------->AHL20(1) >ZmHOX2a(2)  <-----------RAV1(1)     <---------MYB46(3)   <----------DOF2<---------AHL20(2)     <--- -------RAV1(1)<---------At4g35610<---------TOE2(3)  ------->TEIL --------->AHL20(2)--------->CCA1(2)   gtggcggttatgttaactgctgccgttttggttatctaggttgttccgatcaatgaagcttctttgattttatttatttattttagatatattagagttt  25739700  Previous    Next  AGI:  At5g64310.1    Description:  AGP1 (ARABINOGALACTAN-PROTEIN 1). Identical to Classical arabinogalactan protein 1 precursor (AGP1) [Arabidopsis Thaliana] (GB:Q8LCN5;GB:Q94A23;GB:Q9ZT19) Range:  from: 25739159    to: 25739872    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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