Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->ANAC58                            --------->ANAC58                        <-----------HVH21                       --------->ANAC58                       --------->ANAC55(2)                       --------->ANAC58                       <---------ANAC55(2)                <-----------GT1     --------->ZAT6                       <---------bZIP60(1)       <---------YAB1             <---------At5g28300                       --------->bZIP60(1)      <-----------GT1            <-----------GT1      -----                       <---------ANAC46        --------->YAB1    --------->At4g35610            <---- ->AtLEC2       <----------DOF2  <------NtERF2<---------YAB1    <---------ARR11(3)--------->ZAT14   aactatatagttgagcaactttgttacgtcaaggcagagacacatcttattatcagtttttttcaacatctgaaaatttaccactaaacttcaatctcta  25735200                           --------->CCA1(2)                   --------->YAB1                                      <---------YAB1            <---                <---------ICU4          --------->AHL20(2)           <---------ICU4             <----               --------->ICU4<---------AHL20(2)                     --------->ICU4              ----- ---->ZAT14--------->ZAT14--------->ARR11(3)                     <---------YAB1<----------DOF2------- -----ZAT14<---------ZAT14<---------ARR11(3)   >>>>>>>>>>>>>>>>>LFY <---------YAB1  ---------->ID1   tactagtagtttctgtactaatgacaaagatttaaacgacgattattttgaccagtgtttgaagcatatgattattattctcttttgtctccaaaaacat  25735300                       <---------REM1(1) ------ICU4          <---------ANAC46                                                            ---- -----YAB1        <----------DOF2                                    ---------->DOF2             ---- ---->ICU4   <----------DOF2                                        --------->YAB1               ---- -->YAB1<------ZmHOX2a(1)             ---------->DOF2      ---------->DOF2    <----------DOF2    ----   aattagagaaggagacttttctttggtgtaagtgtaactaaaaagaagatgaaaatgaattgaaagtctataaaagttggctttgaagagaagagagcca  25735400                                                                             ---------->DOF2                                                                          --------->AHL20(2)                                                                   <---------ATERF1(2)                                                                   --------->ATERF1(2)                                                                   --------->RAP2.6(2)                                                                   --------->RAP2.3(2)                                                                   --------->DREB2C(2)                                                                   --------->DEAR3(1)                                                                   --------->RRTF1(2)                                                                   --------->RAP2.3(3)                                                                   --------->RRTF1(3)                                                                  --------->ATERF1(1)                                                                  --------->ORA47(2)                                                                  --------->RAP2.3(1)                     --------->ANAC46                             --------->ERF1                     --------->ANAC58 ------>ZmHOX2a(1)           --------->RRTF1(1)                     --------->ANAC58--------->TOE2(3)            --------->DEAR4(2)                   --------->ANAC46  --------->TOE1(3)            <------NtERF2                   <---------ALFIN1 ------>ZmHOX2a(2)             --------->RAP2.6(1)                 <---------ALFIN1  <------ZmHOX2a(2)             <---------RAP2.3(1)                 --------->AtMYB61<---------ARR11(3)             <---------RRTF1(1)        <---------CCA1(2)         --------->ARR11(3)             ------>NtERF2      <---------ANAC58            <---------ARR14(2)             <---------ATERF1(1)      <---------ANAC58            --------->ARR14(2)            --------->ANAC46 ----->ANAC58  ===========================HOX2a_HOX2a           <---------RAP2.3(2)               <-- ----->ANAC58  ------>ZmHOX2a(1) <---------GLK1(1)    <-----------GT1    --------->AHL20(2)       <-- ----->AtLEC2  ============================HOX2a_HOX2a---------->ID1 <------NtERF2               ---- ----->ANAC46 --------->ANAC46   --------->GLK1(1)   <-----------GT1------>NtERF2    <---------At4g35610   agcaagtgtcttatctcctccacaccgaatcacagagatccttaaattcttcatttttcccaatttgcgccgccattaaaaaagcttagctaatcgctat  25735500                                                   --------->ARR14(2)                                                   <---------ARR11(1)                                                   ------->TEIL          ------->GAMYB                           <---------CCA1(2)         <---------MYB46(2)                      --------->LBD16         <---------MYB52(2)                     <---------ALFIN1         --------->MYB46(3)                     --------->ANAC58         <---------MYB111(1)                    --------->ANAC46     --------->LBD16                            --------->ANAC58    --------->ANAC58                           --------->LBD16    --------->ANAC46                     <----------DOF2    --------->ANAC58                     <---------DAG2   <---------LBD16                    --------->REM1(1)  --------->At4g35610                 <---------ALFIN1 ---------HVH21                      <---------ZAT14 ---------TGA1           ------>ZmHOX2a(1)     <---------LBD16------------>CBF ----->YAB1--------->MYB52(1)        --------->ZAT14      <<<<<<<<<TBF1  ------>ZmHOX2a(1)          -   cgtcatccgcaactaacaagacccatcctctctcttcgctacacttttccccgcatcttcttcttccaatctctcctattaatcggtactgtgttttctt  25735600                              *TSS                  <-----------ARR10                  <---------ARR11(3)                                     --------->CCA1(2)                  <---------ARR14(2)                                    --------->ARR14(2)                  --------->ARR14(2)                                <---------LBD16                  --------->ARR11(3)                           <---------ANAC46     --------->TOE1(2) --------->ANAC46                        <---------ANAC58    --------->ARR11(3)    ------>ZmHOX2a(2) -------->P                               <---------ANAC58    <---------ARR11(3) ---------->HVH21 --------->GLK1(2)                    --------->TOE2(3)<---------ARR14(2)        <--   ctgtgatcgtgagattagaaaatctacccaaatttttgattttgcgataagggtttttcttaatttcgtctacggatatagaaaatgtcttccatcaatt  25735700      <---------ICU4       <----------DOF2  ----------->GT1                                        <-  ------>ZmHOX2a(1)<---------ALFIN1        <---------AtMYB61           <-----------GT1       <------- --------->TOE2(3) --------->AtMYB61     --------->ALFIN1          <---------YAB1            -------- ---------GT1------>ZmHOX2a(1)     --------->WRKY18(1)    <---------CCA1(2)              --------->ATHB12   tatcctcatcatctccttccaccatctctctttcccgctcaaggtgaggttttttcttccaaatctcttattgttaccaattcgtttttgctcattggtt  25735800                                                                           <---------TOE1(3)                                                                      <---------ARR11(3)                                                                    ------>ZmHOX2a(1)                                                                  ==================HOX2a_HOX2a                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                 ===================HOX2a_HOX2a                                       <---------ARR14(3)       --------->AGP1--------->ARR14(2)                                       --------->ARR14(2)       --------->ARR11(3)                                       --------->ARR14(3)       <---------ARR11(3)           <-------       <---------LBD16                 <---------ARR11(3)       <---------ARR14(2)           --------     --------->ALFIN1                  --------->ARR11(3)       --------->ARR14(2)       <---------ANAC58   <-----------RAV1(1)                 <---------ARR14(2) --------->At4g35610 <---------ARR14(2)  <---------TOE2(3)             --------->ANAC58          <---------ZAT2   <---------TOE2(3)<-------- --------WOX13(1) --------->ARR11(3) ----------->ARR10    <---------At4g35610<------ZmHOX2a(1)    <-- --MYB46(3)     <---------YAB1  --------->ANAC58--------->YAB1----------->ARR10    <---------YAB1---- --->GT1<---------ANAC46<---------AtLEC2<---------RVE1(1) --------->ZAT2------>ZmHOX2a(2)<---------ANAC58   aattgatgttggggaaatatgattttgcatcgacacgagaagatattcaattctaatctcagcttagatcctgatctaaggatttgtaattgcgcttcag  25735900      <---------GLK1(2)      --------->ARR11(3)    ----------->ARR10 --------->TOE2(3)                                                                            <------ --------->TOE1(3)                                                                     <---------ICU4 --ZAT14                                                                               --------->ATHB12 ->ZAT14                   --------->YAB1 --------->YAB1                              <---------YAB1 --DOF2                    <---------ICU4<-------TEIL                <---------ANAC58 --------->ICU4< -------ZAT18             <------ZmHOX2a(2)        <-----------GT1   <---------ANAC58 <---------ATHB12 ------->HVH21   <---------AHL20(2)  <---------TOE2(3)           <----------DOF2     <---------TOE2(3)   tgaccttagattttgtgatttaaaatcgatcatgacattgagattcatagttttcacatatcgaatgctttgcttcttctctcgtttaatgatttgatga  25736000               ---------->DOF2           --------->ANAC58   <---------ZAT18                                                                               ----   <---------ZAT14                                                  ------->GAMYB                <---   <---------At4g35610                                           <-----------GT1                <----   --------->ZAT14                                       <-----------GT1                        -----   --------->At4g35610                                 <---------DAG2 ------>MYB83 <----------DOF2   --------->REM1(2)                                   <----------DOF2------>MYB46(1)           ----- ---YAB1   --------->ANAC58                         <-----------GT1--------->MYB46(3)   ------------- ---------ANAC46                                 <---------ZAT6<---------MYB52(2) <---------DAG2-----   ttctgtgcagactaagccaaagctctactacattactccatggactacatcgtgttactttaccatctaaccatccattgtcaaccttttccattaaaac  25736100  Previous    Next  AGI:  At5g64300.1    Description:  ATGCH (ARABIDOPSIS THALIANA GTP CYCLOHYDROLASE II); 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II. Identical to Riboflavin biosynthesis protein ribBA, chloroplast precursor [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase (RIBBA) [Arabidopsis Thaliana] (GB:P47924;GB:Q9SBA8); similar to riboflavin biosynthesis protein, putative [Arabidopsis thaliana] (TAIR:AT2G22450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43134.1); similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase [Malus x domestica] (GB:AAQ03091.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23 Range:  from: 25735630    to: 25738388    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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