Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ------>NtERF2                                                  --------->MYB52(1)                                                  <---------ATERF1(1)                                                 ----------->HVH21                 <---------HSFB2a(2)             --------->DEAR3(1)                 --------->HSFB2a(2)            --------->DEAR3(2)              ------>ZmHOX2a(1)          <------ZmHOX2a(1)       ----------->HVH21               <---------TOE2(2)     <---------ANAC46                  <---------TOE1(2)     <---------ANAC58             --------->ARR14(2)     <---------ANAC58             --------->GLK1(2)<------NtERF2                               <-----  <---------AtMYB61      <------ZmHOX2a(1)   --------->MYB59                  ----------->ARR10------ >NtERF2  <-----------------AGL1  <---------ARR14(2)              --------->GLK1(2)           <------ZmHOX2a(1)   ccttgtggtgtgactccttctggtacaggaacagcgaatcggaggattaggccgacggagattgagagaatcagagggatgagtttcgctccttgaggag  25733600                                                        --------->ATERF1(1)                                                        <------NtERF2                                                       <---------ERF1                                                       <---------DEAR4(2)                                                       <---------RAP2.3(1)                                                       ------>NtERF2                                                       <---------ATERF1(1)                                                       <---------ORA47(2)                                                      <---------ATERF1(2)                                                      <---------ANAC46                                                      <---------RAP2.3(2)                                                      <---------RAP2.3(3)                                                      --------->ATERF1(2)                                                      --------->DEAR3(1)                                                      <---------DEAR3(1)                                                     ------>NtERF2                                                     --------->ATERF1(1)                                                     <------NtERF2                                                     <---------ABI4(1)                                                    <---------RAP2.3(1)                                                    <---------ORA47(2)                                                    <---------ATERF1(1)                                                   <---------RAP2.3(2)                                                   <---------RAP2.6(2)                                                   <---------DEAR3(1)                                                   <---------RRTF1(2)                                                  --------->SPL7                                                 --------->ALFIN1                                                <---------SPL7                                              <---------ANAC58<---------ANAC46                                     <-------GAMYB--------->ABI4(2)                               --------->ALFIN1<---------ANAC58         --------->GLK1(2)                              <------ZmHOX2a(1)<---------ANAC58   --------->ALFIN1                            --------->ALFIN1  <---------ANAC58<---------ANAC58                           <------ZmHOX2a(1)  <---------DEAR3(1)<---------ANAC46                         --------->ALFIN1    <---------LBD16  <---------ANAC58                        <------ZmHOX2a(1) <---------ANAC58   <-------TEIL      <---------ARR14(2) ----ARR14(2)         --------->ALFIN1    <---------ANAC58 <---------ARR14(2) <------ZmHOX2a(1) ----->HVH21    --------->ALFIN1 <------ZmHOX2a(1)<---------ABI4(1)----------->GT1      <---------HSFB2a(2)   acggagacggagacggagatgggggaggaggaggaggagcgttgtcttgcggtgcggcggcgattcgtgtggagaatcgaggaattggtttgagaagagg  25733700                                                     --------->HSFB2a(2)                                                     <---------HSFB2a(2)                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  --------->ARR11(3)                        <------MYB83                                                  <---------ARR14(2)                        <------MYB46(1)                                                  <---------ARR11(3)                       <---------AtMYB61                                                  --------->ARR14(3)                       --------->ALFIN1                                                  --------->ARR14(2)                --------->ALFIN1                                                  <---------ARR14(3)               <-----------HVH21                                                 --------->GLK1(1)                <---------ANAC46                                                 <---------GLK1(1)                <---------ANAC58                                                ----------->ARR10 <---------LBD16 --------->O2      <                                               <------NtERF2    ----------->HVH21 <---------O2      -                                    <---------MYB46(3)         --------->SPL7     <---------ANAC58---       ----------->GT1   ------>ZmHOX2a(2)    --------->LBD16  <-------TEIL       <---------ANAC55(2) <------ZmHOX2a(1)      <------ZmHOX2a(2)    <---------ANAC46<---------SPL7       --------->ANAC55(2) ==============================HOX2a_HOX2a  <---------------------WRI1            --------->TGA1a<--- ===============================HOX2a_HOX2a <---------LBD16<---------------AtSPL8 <---------TGA1a----   gaaggagagaggttgaacggagagagatcggagggagattgttgaaggcggagatctcgaagaggtacgacggagaagagagagacgtgagggatggtga  25733800                                  --------->ALFIN1                                --------->MYB55(2)                                <---------MYB46(3)                               <---------DEAR3(1)                               <---------AtMYB61                               --------->ALFIN1                              <-------GAMYB                              <---------ABI4(1)                             <---------MYB46(3)                            <---------DEAR3(1)                            <---------ANAC58                            <---------DREB2C(2)    --------->ATHB12        <---------ANAC58   <---------YAB1           <---------ANAC46                                   --------->AHL20(2)   --------->ICU4           <---------DEAR4(1)                                 <---------AHL20(2) --------->YAB1             <---------RAP2.6(2)                            --------->AHL20(2) ---------YAB1             <---------ABI4(1)                          <------NtERF2 -------->ICU4           --------->ALFIN1                            --------->LBD16 ------>YAB1       --------->ALFIN1           --------->ZAT14       --------->DEAR3(1) ------YAB1      <---------ANAC46 <---------ANAC46                 <---------LBD16                --- ----->ICU4     --------->DAG2<------NtERF2   <---------ZAT14    --------->DEAR3(1)              <---   tgatgatgatgggagagtaaggtggaagtggcggtggtggagagagagtgaagagcgaaactctccatcgccggagattatatatatagagagagtgtct  25733900                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                       <---------ARR11(3)                                                       --------->ARR14(3)                                                       --------->ARR11(3)                                                      --------->GLK1(1)                                                      <---------GLK1(1)                                                  <------NtERF2                                                 --------->LBD16             <---------AHL20(2)                 --------->DEAR3(1)             --------->AHL20(2)                <---------LBD16         ----------->GT1                       --------->ATERF1(1)        <---------ANAC46   <------NtERF2                               <------NtERF2             --------->ATHB12  ------>NtERF2                               ------>NtERF2             <---------YAB1 <---------RAP2.6(2)                          <---------RAP2.3(1)    --------->ICU4 --------->ATERF1(2)              --------------------->WRI1         <---------YAB1 <---------ANAC46              <xxxxxxxxxxxxxxxxsmallRNA(se3)      --------->YAB1             ------- <---------RAP2.3(3)    --------->MYB52(2)   <---------DEAR3(1)    <---------ICU4           --------- <---------DEAR3(1)   <---------MYB52(1)     --------->ETT(2)     --------->ICU4        --------->At4g35610 -------->HVH21      <-----------HVH21     <-----------HVH21      <---------ATHB12  *TSS<---------At4g35610 --------HVH21       <-----------TGA1     <-----------RAV1(1) <------ZmHOX2a(2)   <---------ANAC46   gtgacggcgaagtgtttaattttcgtcagtcgctcgctgtgtttttgtcgccggagagatctcgatcaatgatgatgagtggatgtgtgaagctgaaagt  25734000                                                                           <----------DOF2                                          --------->MYB52(1)               <---------DAG2                                        <---------MYB52(2)              <---------ALFIN1                                      ------>MYB46(1)                  --------->MYB46(3)                                      ------>MYB83                   ------>MYB83               <----                                    <---------MYB59                  ------>MYB46(1)   <------MYB83                                   --------->MYB46(3)              <---------MYB59     <------MYB46(1) ---->GT1         ---------->DOF2<-----------GT1                  --------->DEAR3(2)  --------->MYB59 ->DOF2     --------->GLK1(2)<-----------ARR10                    --------------->AtSPL8  <-------TEIL   gaaattacactgagaatctaaaaagtcttcggttctaaccaaacaaaccgaaaccatggtaaacttgaaccgaaccactttttctaatttggttcatttt  25734100                                                                                                  <--                                                                                                  <--                                                                                                <----                                                                                            <------MYB46(1)                                                                                            ---------                                                                                            <------MYB83                                                                                           <---------MYB46(3)                                                                                           --------->MYB55(2)                                                                                          --------->ALFIN1                                        --------->YAB1                                    <---------MYB55(1)                                       <---------ATHB12                                  <---------MYB52(1)                           <----------DOF2                              --------->AHL20(2)<--------P                       --------->ARR14(2)                            --------->YAB1     <---------ANAC46                 --------->GLK1(2)    --------->ANAC58              <---------YAB1     --------->MYB55(2)                 --------->ARR14(2)   --------->ANAC58            --------->YAB1       <---------MYB46(3)                 <---------ARR14(2)  --------->WOX13(1)     --------->ZAT6         --------->ATHB12 -------GT1  <---------MYB59       <------NtERF2 ---------->DOF2 <---------YAB1  <---------ARR11(3)<-   tctagccctggtttaccaaaatccgaattcttttggaggcaatcaaaactcaaaagtcaaaaacactatcatcataaattcaaaatcatcgggtgggtat  25734200         --------->ATHB12    --------->AHL20(2)    <---------AHL20(2) -------AHL20(1)       <---------AHL20(2) -------AHL20(2)    --------->TOE2(3)                                                ---------->DOF2 -----YAB1          --------->YAB1                                                   <---------ZAT14 -->GT1 <---------ATHB12                                                  --------->ARR11(3) --------YAB1       --------->TOE1(3)                                     <---------ARR11(3)     <---   tattttttaaatcatcggtttatcttaaatttttgaaatgatatgttttttttttttttttttggaaacttgagaacatctcattactaaagtgtgaagc  25734300                                                                                                  <--                ------>MYB83      <---------YAB1                                       <---------LBD16      ----------->GT1     <-------TEIL                                   <---------ZAT14          <-- -------DOF2    ------>MYB46(1)   --------->AtLEC2            --------->LBD16<---------ZAT6 <------ZmHOX2a(2)   tttgtctgatgtaaaaccaaatgagagattcatgtcatgaaaattgaagagtagaacaatgctccgagtcaagaatgtagtgtcaattcgacggatcatg  25734400                                                                               >>>>>>>>>>>>>>>>>LFY                                                                            --------->ANAC58                ---------->ID1                                              --------->ANAC58            <----------DOF2                                                <---------TOE1(2)        ------>ZmHOX2a(2)               --------->TOE2(3)                  --------->SPL7   <--------      --------->ARR11(3)                --------->TOE1(3)                <---------SPL7  <---------At4g35610      <---------ARR11(3)         <-----------ARR10   --------->AHL20(2)--------------->AtSPL3 -------------AtSPL8             ------->TEIL       --------->AHL20(2) <---------------AtSPL3   ----- -------------AtSPL3   --------->ZAT6-------->P   --------->YAB1    ------>ZmHOX2a(1)    --------->At4g35610   gaagtactgatcttctttgtcttaaacactatatgaatctacccttaaactaaaataaaaaatacacatcctattcgtacgtcccattgttagatgtcac  25734500  Previous    Next  AGI:  At5g64290.1    Description:  DCT/DIT2.1 (DICARBOXYLATE TRANSPORT); oxoglutarate:malate antiporter. similar to DIT2.2 (DICARBOXYLATE TRANSPORTER 2.2), oxoglutarate:malate antiporter [Arabidopsis thaliana] (TAIR:AT5G64280.1); similar to putative glutamate/malate translocator [Oryza sativa (japonica cultivar-group)] (GB:BAD09285.1); similar to glutamate/malate translocator [Nicotiana tabacum] (GB:AAM89397.1); similar to glutamate/malate translocator [Flaveria bidentis] (GB:AAM89395.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) Range:  from: 25731404    to: 25733984    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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