Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ---------->DOF2                             --------->YAB1                 ----------->GT1                 <---------MYB46(3)        --------->ATHB12    <---------ATHB12                          --------->TOE1(2)       <---------YAB1 --------->ANAC58              --------->At4g35610    ----------->HVH21 --------->ANAC58              <---------At4g35610    ----------->TGA1---------->DOF2          <---------REM1(2)<------ZmHOX2a(1)       <------ZmHOX2a(1) <---------AtMYB61 <---------MYB52(1)   ------->GAMYB  <------ZmHOX2a(1)     ----------->GT1   gttttggtgacgattgaagcggttaagccaatgaaagcccaagcgcctacagggagaggaccaaggacgagacctgagatggtgaagaggaagattgaga  25730300                     <-----------------AGL1                                         <------ZmHOX2a(1)                     <---------ANAC55(1)                  ------>NtERF2     ===============HOX2a_HOX2a                     <---------ANAC58         --------->At4g35610           ------>ZmHOX2a(2)                     <---------ANAC58        --------->GLK1(2)             ================HOX2a_HOX2a                     --------->ANAC55(2)     --------->ARR14(2)            <------ZmHOX2a(2)                     <---------ANAC46        <---------ARR14(2)           --------->ARR11(3)                ----------->GT1             <---------GLK1(2)             <---------ARR14(2)  <-----------GT1    <---------ANAC55(2)  <---------TOE2(3)              --------->GLK1(1)         <- <---------WOX13(1) --------->MYB52(2)  <XXXXXXXXXXXXXXXXXXXXMIR842      <---------GLK1(1)         <-   gtaattgccatccttgtgaggttacttgttctggtcttgggattaagaatctgactatgaggccgattgagacggagatcgcgagaggaattagcttcgc  25730400              <------NtERF2             --------->LBD16            <---------ANAC46            <---------DEAR3(1)           <---------At4g35610           <---------LBD16           --------->ATERF1(1)           ------>NtERF2           <------NtERF2          ------>NtERF2          <---------RAP2.3(1)          <---------RRTF1(1)                                                  <---------ANAC46         <---------DEAR3(1)                                                   ----------->GT1         <---------RRTF1(2)                                                   <---------ZAT6         <---------RAP2.3(2)                                              --------->REM1(2)        <---------At4g35610                                              <---------ANAC46        --------->At4g35610                                            <---------ANAC46        <------NtERF2                                                  <---------ANAC58        --------->ATERF1(1)                                            <---------ANAC58        <---------ABI4(1)                                             <------NtERF2        <---------LBD16                                               --------->ATERF1(1)       <---------RAP2.3(1)                                           --------->ABI4(2)       <---------ATERF1(1)                                           ------>NtERF2       <---------ERF1                                                <---------ATERF1(1)      <---------DEAR3(1)                                            <---------DEAR3(1)     --------->At4g35610                                            ----------->HVH21     <---------ZAT2                                                 --------->ALFIN1     --------->ZAT2                                                --------->ATERF1(1)     ----------->RAV1(2)                                           <-------GAMYB     --------->ATERF1(1)                                           <---------ABI4(1)     <---------At4g35610         <---------TOE1(3)                <---------ATERF1(1)    <---------RAP2.3(1)          <---------TOE2(3)                <---------MYB46(3)   <---------ANAC58           --------->ALFIN1                    <---------ORA47(2)   <---------ANAC46          <-------GAMYB                       <---------DEAR3(1)   <---------RRTF1(2)       <------MYB46(1)                     <---------ABI4(1)   <---------ANAC58         <------MYB83                --------->ANAC58 <------NtERF2   <---------RAP2.6(2)      <---------MYB46(3)          --------->ANAC58------>NtERF2   <---------RAP2.3(2)     <---------AtMYB61        --------->LBD16<------NtERF2  --------->RAP2.6(3)   --------->ALFIN1            ------>NtERF2--------->ALFIN1 --------ANAC58      --------->ALFIN1             <---------LBD16<---------DREB2C(2)            ----- --------ANAC58     <------ZmHOX2a(1)            ------>ZmHOX2a(1)<---------DEAR4(2)         --------   tccttgcggctgcggcggagaaggagggggaggttgaggtttgttttgttcctccggcaaggaagaggcggtggcgcgtagagtgaatcgaggggaagag  25730500                               --------->ANAC58                               --------->ANAC46                               --------->ANAC58                              <---------LBD16                            <---------ZAT14                            <---------SPL7                          <---------------AtSPL8                   <---------ANAC46                  <---------LBD16                 <---------ANAC46                                         ==========================HOX2a_HOX2a                --------->ALFIN1                     --------->ANAC58     <------ZmHOX2a(2)              --------->ALFIN1--------->SPL7       --------->MYB52(1)    <---------ARR11(3)         ------>ZmHOX2a(2)<---------------AtSPL3 <---------MYB52(2)      --------->ARR11(3)     -----      --------->ATHB12   <---------ANAC46<---------DEAR3(1)<---------ATHB12                     <---- ---->CCA1(2) <-----------RAV1(1)  --------->GLK1(1) --------->ANAC58<------ZmHOX2a(1)       <------ZmHOX2a(1) --->ARR10    <---------ZAT6--------->ZAT14 --------->ALFIN1--------->ATHB12              --------->CCA1(2)   atggagagtgatcggagtgttggggatgtgtgtacggaaatcgacggtggaagtaacgcaaatgatttggaggaagatcgatggagagatagataggagg  25730600                                                                            <----------DOF2                                                --------->ALFIN1         <-----------GT1                                     --------->LBD16                  ----------->GT1                                    <---------LBD16                   <---------ZAT6     <------ZmHOX2a(1) ---->At4g35610                     --------->LBD16               ---------->DOF2    --------->LBD16 -----At4g35610   --------->GLK1(1)<---------LBD16            --------->GLK1(1)    <---------LBD16 *TSS   ctgagagtgagattgaacggagagccaaactctccatcccgggagagagagtgtgtgttctccgatatcaaagtgttactttctcaccggaggagcgaaa  25730700                 ----------->TBP                                                   <---------ARR11(3)             <----------DOF2    --------->AHL20(2) <-----------GT1                 --------->ARR11(3)        ---------->ID1      --------->AHL20(2)<---------YAB1                   ---------->DOF2     <-       <-------GAMYB      ----------->GT1  <---------YAB1                    --------->AHL20(2)    --      --------->MYB52(2) ----------->GT1<---------MYB52(1)                <---------ICU4   --------->At4g35610      <---------MYB46(3)--------->DAG2 --------->TOE2(3)              <-----------GT1      <---------At4g35610    <---------MYB52(1) ---------->DOF2----------->GT1          --------->YAB1<---------AHL20(2)    --   ctctctgtttgttgtctttataaaaaaaagttaaataaaaacgttattcttattttccccattattcatattttactaattaaaagataatttagctaaa  25730800                                                                                    <---------At5g28300                                                                                   <-----------GT1                                                                                ------>MYB46(1)                                                                              <---------MYB59                                                                     --------->ANAC58 ---------DOF2                                                       --------->ANAC58 ------->TOE1(3)           <-----------GT1   <---------ANAC46    ---------->DOF2------>MYB83 ------->TOE2(3)  --------->YAB1       <-----------GT1  <---------AtLEC2   <-----------GT1         <-   actttaaaattaagaagtattcaaaattttcacatttggattaacttgtttgtattttgtatgaccataaaacgaaattaccaaattacagtatgtgtta  25730900                               <---------ANAC55(2)                               ----------->GT1                               --------->ANAC58    <---------MYB46(3)                               --------->ANAC58   <---------TOE1(2)                        <---------------AGL15    <---------MYB52(1)                   <---------WOX13(1)                        --------------->AGL15  ------>ZmHOX2a(2)                    --------->ATHB12                     <-----------GT1         <---------ARR11(3)                     <---------ICU4                 --------->ATHB51          --------->ICU4                          --------->ICU4                 <---------AHL20(2)        <---------YAB1                          <---------YAB1 ---------DOF2   --------->AHL20(2)      --------->YAB1                          --------->YAB1   tcttttcgaaaattcagaattatttactgaatcaagtaaaaactcatgatcgtttgtttactataaatactctctcttgattttcatgattgtttgaaga  25731000                                     --------->ICU4                                     <---------YAB1                                   --------->YAB1                                  <---------YAB1  --------->YAB1                                 <---------ARR11(3)                               <---------YAB1     -------->HAHB4                                  ---                             --------->YAB1  --------->ARR11(3)                                  ----                             <---------ICU4<---------YAB1                             --------->ARR11(3)                         <---------YAB1  --------->YAB1                               <---------ARR11(3)                     <---------TOE2(3)<---------ICU4                                 XXXXXXXXXXXXXXXX                  <---------YAB1 --------->ARR11(3)                                  <---------CCA1(2)                --------->YAB1 --------->ICU4<---------ARR11(3)                   --------->AHL20(1)               <------ZmHOX2a(2)<---------ICU4    <---------ICU4                  <---------AHL20(1)              --------->ARR11(3)--------->YAB1   <---------YAB1             --------->YAB1      -----              <---------ARR11(3)-------->HAHB4   --------->ICU4   <-----------GT1--------->AHL20(2) <   cttgtttagtttctgagatcataaatgttgataatgatcataatcaagataatgatggtgaacatgaaataccatatatcaaaatatatatcttaagaaa  25731100                                                                                  <---------AHL20(1)                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)        --------->GLK1(2)                                                     <---------AHL20(2)        <---------ARR14(2)                                                    <---------YAB1     --------->ANAC58              --------->TOE1(3)                       <---------AHL20(2)     --------->ANAC58      <---------RVE1(1)                           <---------AHL20(2) -------->GT1             <---------MYB52(1)                          --------->AHL20(2)      ------- ----->DAG2       <---------MYB52(1)------>ZmHOX2a(1)                 <---------AHL20(2)      <------ XXXX>MIR830    <---------MYB46(3) --------->TOE2(3)                 <---------WOX13(1)     <------ZmHOX2a(1) ----->DOF2 ------>ZmHOX2a(1)    <---------YAB1                 --------->At4g35610       <---------TOE1(2) ----------ID1  ----------->GT1 <-----------GT1                 <---------At4g35610<---------AHL20(2)   aagtgacaagaatcctagtcgttaatccgatatttatccttaagtttatttcaaatttgtcaaataagctgatttattttataatttttttgtaggattt  25731200  Previous    Next  AGI:  At5g64280.1    Description:  DIT2.2 (DICARBOXYLATE TRANSPORTER 2.2); oxoglutarate:malate antiporter. similar to DCT/DIT2.1 (DICARBOXYLATE TRANSPORT), oxoglutarate:malate antiporter [Arabidopsis thaliana] (TAIR:AT5G64290.1); similar to chloroplast glutamate/malate translocator [Pisum sativum] (GB:ABO87605.1); similar to glutamate/malate translocator [Nicotiana tabacum] (GB:AAM89397.1); similar to glutamate/malate translocator [Flaveria bidentis] (GB:AAM89395.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) Range:  from: 25728295    to: 25730699    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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