Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->LBD16    <---------HSFB2a(2)                            --------->At4g35610    --------->HSFB2a(2)          --------->HSFB2a(2) ---->ANAC58                     <---------HSFB2a(2)    --------->CCA1(2) ---->ANAC58          <---------AHL20(2)           <---------ZAT2 >ZAT6               --------->AHL20(2)            <---------At4g35610                    -----------   gcaactccagaaaactccacagataaaattgtttaccagaaaacaaaaaactcagcagatagaagagattgtatcaattcatcgaagctagatcgaaaaa  25693900                                --------->At4g35610                                           <------                      <---------ARR11(3)                                                --------->AHL20(2)                 <---------HSFC1(1)                                                     <---------AHL20(2)                 --------->HSFB2a(2)                                                <---------AHL20(2)                 --------->HSFC1(1)                                                 <---------YAB1                 <---------HSFB2a(2)                                                --------->AHL20(2)             <----------DOF2    <---------At4g35610                                <---------AHL20(2)          <------ZmHOX2a(1)  <---------At4g35610                                   --------->AHL20(2)      --------->REM1(2)      --------->At4g35610       <---------AHL20(2)     <---------AHL20(2) >GT1--------->ALFIN1 --------->ARR11(3)           ------>ZmHOX2a(1)    *TSS --------->AHL20(2)   aaaaactgtgtaggactttctagagatgttcggcagaagacgatgaaggcttcctatttttttttttttgacaaacattttaaattttaattaaactatt  25694000                                             ------->MYC4                                             ------->MYC3                                             <-------MYC4                                             <-------MYC3                                             <-------PIF5                                             <-------MYC2                                             ------->MYC2                                             ------->PIF5                  =================bZIP_DOF  -------->ABF1                  ---------->DOF2           --------->ANAC46                  ====================================bZIP_DOF                --------->YAB1              --------->ANAC55(2)         --------->LBD16           <---------ARR11(3)        --------->HSFB2a(2)       --------->YAB1        <---------HSFB2a(2)----------->HVH21--------->O2       <---------ANAC58  --------->TGA1a    <---------O2       <---------ANAC46  --------->O2       --------->TGA1a               <---------ANAC58       <---       <---------ANAC58  <---------ANAC55(2)<---------ANAC55(2)     <-----------GT1              <---       <---------LBD16   <---------O2     <---------ALFIN1     ----------->GT1                   <---      <---------LBD16    --------->ANAC55(2)<---------TGA1a   --------->DAG2                  ------- ------CBF    --------->GLK1(2)  <---------YAB1           --------->YAB1  <---------ANAC58--------->YAB1   gtttttgtttcgggagaatcaaaagacaagtgaccatgatatcaacacgtggcaactaaatcaaaaggtttaacaggcttgggtttttaatatcagaatt  25694100                                                     <-----------HVH21                                                     <-----------TGA1                                                    --------->bZIP60(2)                        ------>ZmHOX2a(1)           --------->O2                      ------>ZmHOX2a(2)             <---------O2                     <------ZmHOX2a(2)              --------->ANAC58                    --------->AGP1                  --------->TGA1a                    <---------ARR11(3)              --------->ANAC58                    --------->ARR11(3)              --------->ANAC55(1)                    <---------ARR14(2)              --------->ANAC46                    --------->ARR14(2)              --------->ANAC55(2)          --------->ANAC58                   --------->GLK1(1)               <-----------STF1  --------->ANAC46          <---------ZAT14                         <---------ALFIN1  --------->HSFC1(1)          --------->ZAT14                    <---------------AtSPL8 <---------HSFB2a(2)          --------->ZAT18                 --------->ATHB51          <---------HSFC1(1) ------ANAC58      <---------GLK1(1)      --------->ATHB12          --------->HSFB2a(2) ------ANAC58  <-----------HVH21         <---------YAB1      <-----------GT1     --------->ANAC46   < ------ANAC46 <---------ZAT6          --------->AHL20(2)  <---------ICU4         --------->ANAC58   < -->ARR14(2)  --------->ALFIN1        <---------AHL20(2) --------->ICU4       <---------ZAT18<-------   cgtggacgagagagcagtgtgagatcctatcagttccagttttattattggtacacgtcattagtaccttctcgaaactgggcacgcctcatcttcttat  25694200                                  --------->ANAC55(2)                                  <---------ANAC58                                  <---------ANAC55(2)                    --------->At4g35610                    <---------At4g35610                  <---------bZIP60(1)                  --------->bZIP60(1)             --------->YAB1       <---------ANAC46             -------->HAHB4       <---------ANAC55(1)             <---------ICU4       <---------ANAC58            <---------YAB1 <---------MYB52(1)            <---------ATHB12     <---------TOE2(3)     <-------GAMYB                               <-            --------->ICU4<----------DOF2              --------->At5g28300                         -- ---------ANAC58  <---------TGA2(1)                   ----------->GT1 ----------->GT1              -- ---------ANAC58  --------->TGA2(1)           <-----------GT1    ------------>CBF  <------NtERF2  <-- --YAB1 ------------------>ATHB9<-----------GT1<---------At5g28300    --------->YAB1   ---------->DOF2   tggcttacatcgtaatgatgacatcagcctttatttacgtataacaaattaccatgcggttaaaaaaaacaatagttatatgggccgaagaaagcccaaa  25694300                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                 --------->GLK1(1)                                                            <------NtERF2                                                           --------->LBD16                                                           ------>NtERF2                                                          <---------LBD16                                                          <---------ANAC46                                                         --------->ATERF1(1)                                                         <------NtERF2                                                         <---------LBD16                                                        ------>NtERF2                                                        <---------RRTF1(1)                                                        <---------DEAR4(2)                                                        <---------ATERF1(1)                                                        <---------ERF1                                                        <---------RAP2.3(1)                                                        <---------RAP2.6(1)                                                       <---------DEAR3(1)                                                       --------->DEAR3(1)                                                      --------->RRTF1(1)                                                      <------NtERF2<------ZmHOX2a(2)                                                      --------->RAP2.3(1)                                                      --------->DEAR4(2)                                                      --------->RAP2.6(1)                                                      <---------ABI4(2)                                                      --------->ATERF1(1)                                                      --------->ERF1------>ZmHOX2a(2)                                                     <---------ERF1===============================HOX2a_HOX2a                                                     --------->LBD16==============================HOX2a_HOX2a                                                     <---------DEAR4(2)                                                     <---------RRTF1(1)                                                     ------>NtERF2<---------ARR11(3)                                                     <---------ORA47(2)                                                     <---------ATERF1(1)                                                     <---------RAP2.3(1)                                                    <---------RRTF1(3)                                                    <---------DEAR3(1)                                                    --------->ATERF1(2)      <----------DOF2                                                    <---------DREB2C(2)     ======================HOX2a_HOX2a                                                    <---------RRTF1(2)------>ZmHOX2a(1)      *TSS   <-----------GT1                        <---------ATERF1(2)     ------>ZmHOX2a(2)     --------->MYB52(2)                             <---------RAP2.3(3)   <---------ARR11(3)  <----------DOF2                                   <---------RAP2.3(2)   --------->ARR11(3) --------ARR11(3)       ------>ZmHOX2a(2)           --------->DEAR3(1)=============HOX2a_HOX2a ------->ARR11(3)     <---------ARR14(2)           <---------LBD16--------->ARR11(3) ------->GLK1(2)      --------->ARR14(2)     <---------AHL20(2)  <---------GLK1(1)                 <- -------GLK1(2)    <------ZmHOX2a(2)        <---------AHL20(2)  ----------->ARR10          <------ZmHOX2a(1)   gaatctttagttgtttttccgatcgatctgcgagtcgagtagtttttttatttgccggcgccgggagagatcctttgatctttttccgatggaggagcaa  25694400                                                                <---------GLK1(2)                                                                <---------ARR14(2)                                                          ------->TEIL                    ---------->DOF2                                                          --------->GLK1(2)             --------->ANAC58    <------NtERF2           --------->ATHB12              --------->ARR14(2)            --------->ANAC58    --------->ATERF1(1)    <---------YAB1                 <---------ARR14(2) --------->HSFB2a(1)   ------>NtERF2           <------ZmHOX2a(2)             <---------CCA1(2)   <---------HSFB2a(1)   <---------MYB46(3)     --------->ARR11(3)             <---------ARR14(1)  --------->HSFC1(2)  <---------ANAC46        <---------ARR11(3)          <------NtERF2          <---------HSFC1(2) <---------LBD16--------->CCA1(2)        --------->MYB52(1)     --------->ARR14(2)   ------>ZmHOX2a(1) --------DEAR3(1)        <------ZmHOX2a(1)  ------->GAMYB<---------GLK1(2) <---------GLK1(2)   ttcggcgggagcgatgagagatggaaaggatcattggagaatataacggagatggcatcgaatctcgattcgcttcagaaacttctcctcaagaaagcag  25694500                                                             ----------->GT1                                                            <---------TOE1(3)                                              --------->ANAC58        <----------DOF2                                          --------->ANAC46  <---------TOE2(3)                                         --------->LBD16  --------->YAB1            <---------AHL20(2)                                  --------->O2--------->ANAC58        ------>ZmHOX2a(1)                                  ===============================================bZIP_DOF                         <---------ARR11(3)--------->ZAT2<---------ATHB12          --------->AHL20(2)                ============================bZIP_DOF   --------->WOX13(1)       --------->YAB1                <----------DOF2   --------->TGA1a     --------->MYB46(3)     ------>ZmHOX2a(1)   tcttcgttgaagaagacactttctctagagcttctctcgtctccgagcaagcccgaacaatcaaggttaatcctttttcctgtgataaaatttgaaatta  25694600                                                 <---------ANAC58                                              <---------WOX13(1)                            <--------                                            --------->ATHB12                                <--------                                            <---------ICU4                                <---------TOE1(2)                                           <---------YAB1                               <---------ZAT18                                      <----------DOF2                                   --------->ZAT18                                <----------DOF2  <---------ANAC58                      ------>ZmHOX2a(2)                           <----------DOF2 --------->ICU4        --------->ARR14(2)   <------ZmHOX2a(2)   <----------DOF2    <---------At4g35610--------->YAB1          <---------ARR14(2)<---------YAB1   tagagcttaattgtctgaattttgagcttcttttctttgactttgatgattgcttctgtgatttgtggattcgatctagttgatcacgatcgcacttttt  25694700                                                          --------->At5g28300    <----------DOF2                      <---------HSFB2a(2)                                   ------   <---------ANAC58                   --------->GLK1(2)  ----------->GT1                      <------   <---------ANAC58       --------->ZAT14--------->HSFB2a(2)                          --------->AHL20(2) --DOF2                <---------ANAC46 <---------LBD16 <---------DEAR3(1)         --------->YAB1 -DAG2        <---------YAB1     <---------ZAT6      ----------->HVH21            <---------YAB1   agtttgctttagtactactatagctcagtgtaatagtgtgattctggaattgcatttgacggtgaatttgggaacttgtagttgatcataaattttgaat  25694800  Previous    Next  AGI:  At5g64170.1    Description:  dentin sialophosphoprotein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54500.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54500.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN64446.1) Range:  from: 25689692    to: 25693972    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g64180.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO49698.1) Range:  from: 25694306    to: 25695583    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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