Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <------NtERF2                                     ------>NtERF2                                     --------->LBD16                                    <---------ANAC46                                   <---------LBD16                                 <---------DEAR3(1)                             <---------ANAC58                             <---------ANAC58                         <---------ANAC58                         <---------ANAC58                  <---------ANAC46 ------>NtERF2                 ---------->DOF2        <---------ZAT14                  <---------ANAC58 <------NtERF2           --------->ARR11(3)           --------->ZAT14               <------ZmHOX2a(1) <---------RAP2.3(2)--------->TOE2(3)             --------->ANAC58 --------->ANAC46 <---------ANAC58<---------RAP2.3(1)    <---------ZAT6           --------->ANAC58  <   cacaagtagcgatagaaggagcgtgaagcttgcatgcggcgggaagagtagaagccttagtgatattcaaagtaactccaagagaagcactgctcttaaa  25663600                                                                           --------->DEAR3(1)                                                                          <------NtERF2                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)   --------->ANAC58                                                                --------->LBD16     --------->At4g35610                                                              <---------LBD16 <---------ATERF1(1)                                 --------->DEAR3(1)          ------>MYB83------>NtERF2 --------->ANAC58                             --------->MYB46(3)              --------->MYB52(1)  ------>NtERF2                        <----------DOF2                      ------>MYB46(1)  --------->SPL7     <---                      --------->At4g35610                ------->TEIL   <---------ALFIN1        ----- -----------HVH21     <---------At4g35610         ----------->RAV1(1)   --------->DEAR3(1)   --------   cgcttcacatagacactgagagtcagctttaagcaccgtcttaagaccagagcaacatgtaccttccggtttcgccaccgtgcctccgctcgaaacgaag  25663700                                                             <---------ANAC58                                                             <---------ANAC55(1)                                                             <---------AtLEC2                                                             <---------ANAC58                                                          <---------MYB52(1)                                                         <-----------HVH21                                                         <-------GAMYB                                                        --------->DEAR3(1)                                                       --------->ATERF1(1)                                                       <------NtERF2                                                       --------->RAP2.3(1)                                                      <---------RAP2.3(1)                                                      <---------ATERF1(1)                                                      --------->ABI4(2)                                                      ------>NtERF2                                                     <---------DEAR3(1)                                                    --------->RRTF1(1)                                                    --------->ATERF1(1)                                                    --------->RAP2.6(1)                                                    --------->DEAR4(2)                                                    <---------ABI4(2)                                                    --------->ERF1                                                   <---------RAP2.3(1)                                                   ------>NtERF2                                                   <---------ORA47(2)                                                   --------->LBD16                                                   <---------ATERF1(1)                                                   <---------ERF1                                                   <---------DEAR4(2)                                                  --------->DEAR3(1)                                                  <---------ATERF1(2)                                                  --------->ATERF1(2)                                                  <---------RAP2.3(3)                                                  <---------DEAR3(1)                                                  <---------RAP2.3(2)                                                 --------->RAP2.3(1)                                                 --------->ATERF1(1)                                                 <------NtERF2                                                 --------->DEAR3(2)             ------>NtERF2                                                ------>NtERF2--------->ANAC55(2)--------->HSFB2a(2)                                                --------->ZAT2             <-------TEIL                                                <---------ZAT2 --------->ALFIN1--------->DEAR3(1)                                                <---------ATERF1(1)        <---------ABI4(2)                                               --------->ARR14(2)  <---------MYB46(3)                                               <---------ARR14(2) <---------ANAC46                                              --------->ATERF1(1) <---------AtMYB61                  <---------ANAC58          --------->ANAC46 <---------ANAC46 <------NtERF2     <-----------HVH21<---------YAB1 --------->ZAT14<------NtERF2 --------->ALFIN1 ---ZmHOX2a(1)    <---------ANAC46   <---------ZAT14--------->RAP2.3(1) --------->At4g35610      <--- ------>GT1       <---------ANAC58   <---------ETT(2)--------->RAP2.3(2)<---------At4g35610      ---- ->TOE1(2)   --------->ICU4          --------->ETT(2)--------->DEAR3(1)----------->ARR10        <----   gataaacagtcagccatgttgagtatgagagtcgaacagtctacagacggagccggcgccgttgcgtggtggtgagatgcgccgagaactgagacggagg  25663800                                       ----------->HVH21                                       --------->ALFIN1                                      --------->At5g28300                                     --------->LBD16           <---------ANAC58                                    <---------ANAC46           <-----------RAV1(1)                               <-----------RAV1(1)             <---------ANAC46                    <-                               <---------MYB46(3)              <---------ANAC58                  <--- ------ARR14(2)                <---------REM1(1)     <-------GAMYB                               ---- ----->ARR14(2)             --------->ALFIN1        <-----------RAV1(1)         <<<<<<<<<TBF1 <------ --ZmHOX2a(1)      ---------->DOF2 <---------LBD16  --------->ALFIN1     <---------YAB1<----------DOF2   atagggatagaagaacgatgagaaagagaggtgttgttgcggtgaaggaagagtgtgttgccattgtgtgggattttgattcttcttctcttttttttgc  25663900                                                                                        <------MYB46(1)                                                                <------ZmHOX2a(1)       <---------DEAR3(2)                                                             *TSS                       <------MYB83                                                          <---------ZAT14              <---------DEAR3(1) ---------DOF2                    <---------AHL20(2)      --------->ZAT14             <---------ORA47(1) ------------AGL15         ----------->GT1            --------->DAG2                <------MYB83 ----------->AGL15  <---------ZAT14           ------------------------>ANAC81 <-----------TBP -----GT1     <------ZmHOX2a(1)  <---------AHL20(2)---------->DOF2  >>>>>>>>>TBF1   <------MYB46(1)   tcttttgagtttttgaggagagagtagagaggttttttaatggtggaaaatgagaaagagtgaagaggaagaagaagggattttgtaggtcggttttggg  25664000                                     >>>>>>>>>>AtMYC2                                     <---------ANAC55(2)                                     <---------ANAC55(1)                                     <---------ANAC58                            <----------DOF2                                     --------->ANAC55(2)                     <---------PCF2                                     <---------ANAC58                   ------>ZmHOX2a(2)                              <---------TOE2(3)                     ----------->HVH21                              <---------TOE1(3)                   <---------ANAC46                              --------->MYB59                     <---------ANAC55(1)                         <---------ANAC58                         --------->ANAC55(2)                         <---------ANAC46                         <---------ANAC58                         <---------ANAC58                         <---------ANAC55(2)                       <---------TGA2(2)     <----------DOF2      <---------ANAC58               ----                      ----------->TGA1   <---------CCA1(2)       <-------TEIL<---------ANAC46    ----   gttttggggtaatgtgcaaaaacgatgacgtttaggtatacgtgtctctttgcattttccatatggatgcgtgatcgtggggtctttcaccaagagacct  25664100                                                                                                    <                                                                                                   --                                                                                            =========                                                                                         <---------AHL20(2)                                                                                         <-----------GT1                                                                                    <---------AHL20(1)                                                                      <---------------AGL15 <--------        <----------DOF2                                               ===============================       <---------ICU4      <-----------GT1                            --------------->AGL15 <-------- <----------DOF2         <-----------GT1                           <-----------GT1  --------->AHL20(1) -->MYB46(1)        <----------DOF2             <-----------GT1<---------AHL20(2)   <---------AHL20(2) -->MYB83       <----------DOF2     <----------DOF2            --------->AHL20(2)   --------->AHL20(2)   gccctttcatctttccttctttctttttttctctcttccttttcaagtttttactcatttgttttttaattactccattttgaaaatttattaactttac  25664200                                                                                                  <--                                                                                             <-------        <---------AHL20(2)                       --------->TOE1(2)                           <-------       <---------AHL20(1)                        --------->DEAR3(1)                          <-------       --------->AHL20(1)                      ------->TEIL                                  <-------       <---------AHL20(2)                <---------AHL20(2)                  ------>ZmHOX2a(1)------- ------ZmHOX2a(1)                       <---------AHL20(2)                  ========================= --------->GT1                          --------->AHL20(2)              <----------DOF2     <-------- ===========================================================================================MADS_MADS --DOF2--------->AHL20(2)           --------->AHL20(2)            <----------DOF2   --------->ANAC46 =======MADS_MADS                   <---------AHL20(2)         ---------->ID1<---------------AGL15<-- -------AGL15  <----------DOF2      --------->ICU4     --------->ARR14(2)   --------------->AGL15<---   taggaaaaatttattagctttcatacactaactaagaaaaaattaaatgcacctccgaattctttgttctttcgctttcctattatgcgaaatttgcggg  25664300                                                                                            <--------                                                                 ----------->GT1            --------- -------RVE1(1)                                                ----------->GT1             ------>ZmHOX2a(2) --ANAC46                                                  <---------AHL20(2)         <---------WOX13(1) --ANAC58                                                  --------->AHL20(1)       <---------ICU4 --LBD16--------->WOX13(1)                   --------------->AGL15                  <--------ATHB1 --ANAC58  <-----------RAV1(2)             ----------->GT1 --------->AHL20(2)       --------->ATHB12 -->LBD16 <---------ATHB12    --------->ARR11(3)          --------->AHL20(2)        --------->ATHB51 ============================================================MADS_MADS             <---------YAB1 -LBD16--------->MYB46(3)     <---------ARR11(3)    <---------ZAT6                 --------->ICU4 -------CCA1(1)               --------->GLK1(2)     ----------->GT1        --------->MYB52(1)-------- ------ARR11(3)  --------->GLK1(1)       --------->ICU4   <---------AHL20(2)     --------->YAB1   atatttctaacaatcaggggtttccaaacaaaaatctaaactaattagtaattagagtaaaaaaattgagaaaaaaacaacgagaataattgatcgagaa  25664400                           <---------ZAT14                           --------->ZAT18                           <---------ZAT18                           --------->ZAT14                         <---------------AtSPL8             <------ZmHOX2a(1)            <---------YAB1                         --------------->AtSPL8           <---------TOE1(3)             <---------TOE2(3) --------->AHL20(2) <---------YAB1             --------->ANAC46           ------>ZmHOX2a(1)       <-- -HSFB2a(2)    <-----------GT1               --------->MYB46(3)          --------->TOE1(3)     ------ >HSFB2a(2) <---------MYB46(3)               <---------MYB52(2)          --------->TOE2(3)--------->ATHB12 --->GT1    --------->MYB52(2)             <-----------GT1<---------TOE2(3)       <---------YAB1 <---   aaataaactattgtttgttactatgttagtgtactctcttgaaaataacaaaccacatttaaggaaatgttttatcctcaaacccttattgatgtttggc  25664500  Previous    Next  AGI:  At5g64080.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. Identical to Non-specific lipid-transfer protein-like protein At5g64080 precursor [Arabidopsis Thaliana] (GB:Q8VYI9;GB:Q8L8Q1;GB:Q9FMI9); similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT2G13820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16182.1); similar to xylogen protein 1 [Zinnia elegans] (GB:BAD24657.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Plant lipid transfer protei Range:  from: 25662489    to: 25663961    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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