Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                  <--                                                                                                 ----                                                                                                 ----                       ------>NtERF2                                                             ----                      <---------ARR14(2)                                                         ----                      --------->ARR14(2)                             --------->TOE1(3)           ----       ------->GAMYB------->GAMYB                             --------->LBD16                  ------      <---------MYB55(2)                                     --------->ANAC46                 -------      <---------MYB52(2)                                     ----------->GT1                  <------      --------->MYB46(3)                          --------->TOE1(2)  --------->TOE2(3)      <--------      <---------MYB111(2)               <---------ATHB12    <---------LBD16           ------>MYB83--- -RAV1(2)        --------->MYB52(1) --------->LBD16   <------ZmHOX2a(1)               ------>MYB46(1)   ctcttccaacaaaccagattaacggagcctctctcttccccaataactaaaccctaggattacccgtaaaaccttaactcaaaaaacctatctataacca  25661300 --------->DOF2 -------MYB55(2) ----->ANAC58                                                                                      <- ----->ANAC46                                                                                      -- -->MYB46(1)                                                                                       <- -->MYB83 --------->ARR11(3)                  <---------YAB1                                      <-- ----->ANAC58                                 --------->ICU4                                      <-- ->GAMYB  <---------ARR11(3)           <----------DOF2            ----------->GT1                ---- -->MYB46(3)                         ---------->ID1              <---------------------WRI1    <----- ---MYB55(2)--------->TOE2(3)    >>>>>>>>>CBP60g           ------>ZmHOX2a(1)              <---------GLK1(1) ---GT1  <---------GLK1(2)       >>>>>>>>>SARD1       <----------DOF2                     --------->GLK1(1) ------>MYB46(3)            --------->ANAC46--------->YAB1--------->TOE2(3)   ----------->GT1<-------   cccaaagctcaaaatctcaatgccaaatcgacgaaatttggctttataatgcttaactttcctaaatcgcgaaaaaaacacagaaaatagagatttctcc  25661400                                                   <---------GLK1(2)                                                 --------->LBD16                                                --------->HSFB2a(2)         --------->ANAC58                       <---------HSFB2a(2)   ------>ZmHOX2a(1)                           <---------LBD16 --------ARR14(2)                        <---------HSFB2a(1)                                    <---- ------->ARR14(2)     ---------->DOF2    --------->HSFB2a(1)                              --------->At4g35610 --------ARR11(1)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          --------->ANAC58 -------ARR14(1)    --------->LBD16      --------->HSFC1(2)                       --------->ANAC58 -------CCA1(2)     --------->At5g28300  <---------HSFC1(2)                       ------>MYB46(1) ----->LBD16    ------->GAMYB       ------>ZmHOX2a(2)                 <---------ANAC55(2) <---------At4g35610 ----LBD16     --------->MYB46(3)  <------ZmHOX2a(2)--------->ARR14(2)<---------ANAC46<----------CDC5 ----GT1 --------->ANAC58         <---------ARR14(2)--------->GLK1(2) <---------O2------>MYB83  -----   gtatcctactcactccaatcgccgtaaaccgaaggcgatcggaaatttctccagaatccaaaactaaatctcacgtagagaaccaagcgatgagctaatt  25661500                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                     <------NtERF2                                                          --------->MYB52(1)        <---------ATERF1(1)                                ----------->GT1        --------->ANAC58             <-----------HVH21                              <---------ANAC58         --------->ANAC55(2)         --------->DEAR3(1)                   --------->HSFB2a(2)                 <---------ANAC55(2)      ------>ZmHOX2a(2)           ------>ZmHOX2a(1)  <---------ANAC58     --------->GLK1(2)          --------->ARR14(2)    <---------MYB52(1)      <---------YAB1    --------->At4g35610             <---------ARR14(2)-----    --------->ARR14(2)   --------->GLK1(2)    --------->ZAT14           <------NtERF2--------->ATERF1(1) -----AHL20(2)     --------->LBD16  --------->AHL20(2) --------->ANAC58--------->LBD16     <--------- ---->AHL20(2)     <---------HSFB2a(2)        <---------ZAT14        <---------LBD16------>NtERF2<---   aatcccgttcttcctgctatccgagaaattctgcttgttaaaattcagagcagaatcaagtaacagaattagccggagtagatcgccgtcgtctcagccg  25661600                                         --------->MYB52(2)                                         <---------MYB46(3)                                         <------MYB83                                         <------MYB46(1)                                        --------->MYB55(2)                                        <---------AtMYB61                               ------------>CBF                            <---------SPL7                                             --------->ANAC58                        <---------MYB46(3)                                        <---------YAB1                        <---------DEAR3(1)                                      --------->YAB1                   <-------TEIL  <---------DEAR3(1)                             -------->HAHB4                  --------->ARR14(1)    <---------MYB46(3)                      <---------ICU4 ---LBD16         --------->CCA1(2)   <-------GAMYB                            <---------YAB1 --ZAT2  <---------ANAC46 <------NtERF2<---------MYB52(1)                      --------->ICU4 --At4g35610     --------->ARR11(3)  <---------MYB46(3)                   ----------->GT1 ->ZAT2 <---------AtMYB61 --------->ATERF1(1)<------NtERF2                --------->ANAC58         <- ->At4g35610     <---------ARR14(2)  <-----------RAV1(1)                  --------->ANAC58         -- ---->LBD16      --------->ARR11(1)  --------->MYB55(2)                 *TSS--------->AHL20(2) <----- --RAV1(2)       --------->ARR14(2)<---------At4g35610                  ---------->DOF2--------->ANAC58 ---NtERF2     ----------->ARR10------>ZmHOX2a(1)                  --------->ALFIN1 <---------SPL7---   gaagcagtttgtggtggaagatacggtcgtcgtcctcggctgttggtggcagacagagagagagagagagaggggaaagtaattatcgttcgcaatactt  25661700                                                                                                    -                                                                                                    <                                                                                                  <--                                                                                                  ---                                                                                                -----                                                                                               <-----                                                                   <---------YAB1              <-----                                                                  <---------AHL20(2)           ------                                                              --------->ATHB51                 <-----                                                              -------->ATHB1                 --------                                                              <---------ICU4               ------>ZmHOX2a(2)                <---------YAB1                                -------->HAHB4              <------ZmHOX2a(2)             --------->AHL20(2)                               <---------AHL20(2)          --------->CCA1(2)        <---------YAB1        <---------AHL20(2)              <--------HAHB4             <---------ARR14(2)       <-----------GT1        --------->AHL20(2)              --------->YAB1             --------->ARR14(2)   <---------AHL20(2)     <---------AHL20(2)                 --------->ICU4              <---------ARR11(3)   --------->AHL20(2)    <---------AHL20(2)                  <---------YAB1              --------->ARR11(3)  --------->AHL20(2)     --------->AHL20(2)                  <---------ATHB51            --------->AGP1  <---------AHL20(1)    --------->YAB1                    <---------AHL20(2)            --------->GLK1(1)  <---------AHL20(2) <---------AHL20(2)                   --------->AHL20(2)            <---------GLK1(1) --------AHL20(2)   <---------AHL20(2)                   --------->AHL20(2)           <------ZmHOX2a(1) ------->AHL20(2)   --------->AHL20(2)          --------------->AtSPL8        <---------ANAC58 ====== -----DOF2   <---------AHL20(2)                 --------------->AtSPL3        <---------ANAC46 ====== ------>AHL20(2)<---------AHL20(2)  <XXXXXXXXXXXXXXXXXXXXMIR841B<---------YAB1<---------ANAC58 <-----   ttaaattattttcatttttttattaattttaattttttggtttttagtaattcgtactatttaattattattttggtttggcgagggaggagatctaacg  25661800          --------->ZAT18     ---------->DOF2 -------->At4g35610 ---------At4g35610 -------ZAT14         --------->YAB1 ------>ZAT18        <---------YAB1 ---->TOE1(2)      --------->YAB1 ----ANAC58       <------ZmHOX2a(2)<---------ARR11(3)               --------->MYB52(1) ----ANAC46  --------->ANAC58      --------->ARR11(3)            --------->ANAC46 --->TGA1a<---------WRKY38(1)      --------->ARR14(2)           <-----------------AGL1 ----TGA1a<---------ZAT18          --------->GLK1(2)            --------->ZAT18                <----- ->MYB52(1)  --------->ANAC46      <---------ARR14(2)           ----------------->AGL1      <-------- ===============bZIP_DOF  --------->DAG2              --------->ANAC55(2)                 <---------WOX13(1) ===============bZIP_DOF ---------->DOF2   <---------ANAC46     <---------ZAT18      <---------At4g35610 ----ANAC58  --------->ANAC58 ----------->GT1       <---------DOF5.7(2)------->GAMYB <-------GAMYB   tgcgctggaaagtccacgcgatcataataaagttgaaaatccttggtgggaagtaaacgtgatttgtccacaacgggacacttggacagttgattaactt  25661900                                                  <---------ARR11(3)                       <---------AHL20(2)       <---------TOE2(3)      <---------At4g35610 <----------DOF2 <---------YAB1      <-------GAMYB<---------ICU4       <-----------GT1 ----------->HVH21<---------YAB1       <---------YAB1              <---------YAB1            -------- --------->ETT(2) --------->ICU4     <---------ICU4--------->GLK1(2)    --------->ANAC58   --------->ICU4 -----DOF2      --------->YAB1      <---------YAB1--------->ARR11(3)    --------->ANAC58 --------->YAB1 ---GT1       <-----------GT1      <---------GLK1(2)            ------->TEIL          ----------->GT1   ttgttgacagttgatttttcattattttctttcaaaagattattactattgagattttgaattttgaatctgataagctaattacaagaagtaataatct  25662000                                                                      <---------O2                                                                      --------->ANAC58                                                                      --------->ANAC55(2)                                                                      --------->O2                                  --------->ANAC46                    ===============================                             <----------DOF2                          <---------TGA1a           <----                          --------->ARR11(3)                          --------->TGA1a          ------                          <---------ARR11(3)                          --------->ANAC46       <-------TEIL                         <---------CCA1(2)                        <-----------HVH21        ------->MYC3                       --------->AHL20(2) --------->ANAC58       <----------DOF2   XXXXXXXXXXXXXXXXXX                       <---------AHL20(2) --------->bZIP60(2)    ===============bZIP_DOF   <-------MYC3                   <---------AHL20(2)     --------->ANAC58 <----------DOF2         --------->TOE2(3)                  --------->AHL20(1)      --------->ANAC46 =====================bZIP_DOF   <-------MYC2 ->GLK1(2)        <---------AHL20(1)  ------>NtERF2    <-----------GT1--------->ANAC58     ------->MYC2   gatttttaaaaaatacgatatatatttatatctttcacgatgccacgaaacattttgtttcctttcactttcacgtctctaattttcttaacacatgcat  25662100       <---------At4g35610 <----------DOF2                                                        --------->At5g28300 ===========bZIP_DOF                                               <---------ZAT14       <---------YAB1 -----GLK1(1)                                           --------->ZAT14----------->GT1--------->ICU4 ->TEIL--------->At4g35610                      <---------WOX13(1) --------->ZAT14 <---------AHL20(2) XX>MIR3440B-5P    --------------->AtSPL8    <---------YAB1        --------->ZAT18 --------->AHL20(2)   ttccttttcagatgaagaaattttgtactcgtttcatagaacaagttgtaattggtactatagtcaaactacactgtaacaaaatataaatatgatactc  25662200  Previous    Next  AGI:  At5g64070.1    Description:  phosphatidylinositol 4-kinase (PI4K). similar to phosphatidylinositol 4-kinase, putative [Arabidopsis thaliana] (TAIR:AT5G09350.1); similar to hypothetical protein OsI_034285 [Oryza sativa (indica cultivar-group)] (GB:EAY80326.1); similar to putative phosphatidylinositol 4-kinase [Oryza sativa] (GB:AAF34418.1); similar to Phosphatidylinositol 4-kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA92023.2); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Phosphatidylinositol 3- and 4-kinase, catalytic; (InterPr Range:  from: 25654202    to: 25661672    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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