Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------HSFB2a(2)                                                                    --------->MYB52(1)                                                                <---------------AtSPL8                                                         ----------->GT1                                                        --------->ANAC58                                                      --------->MYB52(1)                                                  --------------->AGL15                                                  <---------------AGL15                                                 ----------------->AGL3                                                 <-----------------AGL3                                                 ----------------->AGL1                                                 <-----------------AGL2                                                 ----------------->AG --------->HSFB2a(2)                                                 <-----------------AG<---------LBD16                                                 <-----------------AGL1  --------->ARR14(2)       --------->TOE2(2)              --------->CCA1(2) --------->ANAC58 <---------ARR14(2)      --------->ANAC55(2)      --------->ANAC58  ----------------->AGL2--------->LBD16      <---------ANAC55(2)      --------->ANAC58--------->ARR14(2)<------MYB83      ----------->GT1          --------->ANAC46<---------ARR14(2)<------MYB46(1)        <----------ID1    --------->MYB52(1) <---------ARR11(3)     <---------CCA1(2) --------->MYB59    <---------ANAC58 -->YAB1               --------->ARR11(3)   ------>ZmHOX2a(2) >>>>>>>>>SARD1       <---------ANAC58 --ZAT6--------->TOE1(2)<------ZmHOX2a(2)  <------ZmHOX2a(2)  >>>>>>>>>CBP60g    --------->ARR11(3)   aacccataacgtaagaacaagtagagatcattcacccaagagacgatcgtatccaaaaacggaaatttggtaccggaaccgaatgtcttgacgacaaatc  25590900                                                                                             <-------                                           <---------DEAR3(1)                            --------->ALFIN1                           <---------ARR14(2)                                          <---------ANAC46                           --------->ARR14(2)                                          <---------ANAC58                           --------->ARR11(3)                       <---------DAG2 ------>ZmHOX2a(1)                           <---------GLK1(2)<---------DEAR3(2)    ------->TEIL     <---------------AGL15                  <---------ATHB12        <------NtERF2  <---------MYB52(1)       --------->TOE2(3)            --------->GLK1(2)            ------>NtERF2  <-----------HVH21     <---------GLK1(1)------           <---------GLK1(2)--------->GLK1(2)         --------->MYB46(3)      --------->GLK1(1)<-----           <---------ARR14(2)           --------->DEAR3(1)       <-----------GT1  --------->TOE1(3)<-           --------->ARR14(2)           <---------DEAR3(1)   --------------------->WRI1<---------ANAC58         <---------TOE1(2) <---------ARR11(3)         --------->DEAR3(2)   --------->ANAC46 <--------P   tcttcccatcccagattccaatcgctgaagattcttcaatcggcgtcggtaatcgaaccgtcagattgaacctttcgacgaaatccttaacgtggtagtt  25591000                        --------------------->WRI1                      <------NtERF2                      --------->ATERF1(1)                      <---------ZAT2                     ------>NtERF2                     <---------ATERF1(1)                    --------->DREB2C(2)                    --------->RAP2.3(3)                    --------->RAP2.3(2)                    <---------ATERF1(2)                    --------->DEAR3(1)                    <---------DEAR3(1)                   --------->ATERF1(1)                   <---------LBD16             ----------->HVH21             --------->O2                   --------->RAP2.3(1)     <------NtERF2              ------>MYB46(1)              --                   --------->DEAR4(2)     ------>NtERF2               ------>MYB83                <--                  --------->MYB52(1)      ----------->RAV1(1)       --------->MYB46(3)           <---                  <---------ATERF1(1)    --------->DEAR3(1)         --------->DREB2C(2)          <---                 --------->DEAR3(1)      --------->ETT(2)           ------->GAMYB                ----                 ------->GAMYB           ----------->HVH21          --------->DEAR3(1)           ----          <-----------ARR10              <---------ETT(2)          --------->DEAR3(2)            <---          --------->GLK1(2)             --------->RAP2.3(1)      <---------ALFIN1                ----     ----------->GT1--------->ATERF1(2)<---------ATERF1(1)      --------->SPL7 ----------->HVH21 <--- --MYB46(3)     --------->DEAR3(2)     --------->LBD16          --------->MYB46(3)               ---- --->ARR11(3)   <---------MYB55(2)    --------->DEAR3(1)     <---------ANAC58<---------ANAC55(2) <--- ----ARR11(3)   --------->MYB46(3)   <---------LBD16         <---------ANAC58--------->ANAC55(2)<---- --------LBD16 --------->SPL7    <-----------HVH21      ------>ZmHOX2a(1)    <---------O2 --------->YAB1   cttcggatggagaatcgaaccgccggcttcgaaagtatcaccggcgacagtgacggtcctcatgcgtccaccgactatctcgtgacgctcaaacatcagg  25591100       --------->ATHB12    <---------ANAC58    <---------ANAC46    <---------ANAC58 ---->ZmHOX2a(2) ----ZmHOX2a(2)                                 <---------ZAT2               ------>NtERF2 ------ARR14(3)                                 <---------At4g35610         --------->LBD16 --------ARR10                                <---------ZAT18      <------ZmHOX2a(2) ----->ARR14(3)                               --------->ZAT18     <---------ARR14(2) ----->ARR14(2)                          <------ZmHOX2a(1)   --------->DEAR3(1) ------ARR11(3)                          =================================HOX2a_HOX2a ----->GLK1(2)                      <---------ANAC46        --------->ATERF1(1)              -------- ------AGP1                    --------->MYB111(1)  <---------ANAC46  <---------ALFIN1      <-------- ----->ARR11(3)                ----------->ARR10--------->At4g35610--------->PCF2  <-------TEIL ------ARR14(2) <---------DEAR3(1)  <---------ANAC55(2)    ------->TEIL <---------ALFIN1    <-------- --ZmHOX2a(1)   <---------DREB2C(2)<---------LBD16 <---------LBD16--------->ARR14(2)      <----------   atcttggcttgatttaagccggtggaaacagagtagttacggaggaagtgagctacggatgagcctccgatcccactcccgacgatacatacggtcgctg  25591200                        <---------ARR14(2)                        --------->ARR14(2)                   <---------DEAR3(2)                  <---------ATERF1(2)                  <---------DEAR3(1)                 --------->ATERF1(1)                --------->ABI4(1)                <---------ATERF1(1)                ------>NtERF2               <---------DEAR3(1)               --------->RAP2.3(3)               --------->RAP2.3(2)               --------->DEAR3(1)               <---------ATERF1(2)              --------->RAP2.6(1)              --------->ATERF1(1)              --------->RRTF1(1)              --------->RAP2.3(1)              --------->ORA47(2)              --------->ERF1              --------->DEAR4(2)              <------NtERF2             <---------RAP2.3(1)             <---------ATERF1(1)             ------>NtERF2             <---------RRTF1(1)                   --------->LBD16                          <---------ARR11(3)            <---------DEAR3(1)                   --------->TOE1(2)                         --------->ARR11(3)         ----------->HVH21                       --------->DEAR3(1)                       <---------GLK1(1)   --------->YAB1<------NtERF2       --------->ANAC58                                     --------->GLK1(1) --------->GLK1(2)--------->ATERF1(2)--------->ANAC58                                  --------->LBD16 ->At4g35610--------->DEAR3(1)  <------NtERF2  --------->MYB52(1)                     <---------HSFB2a(2) -MYB46(3)  --------->ANAC46   --------->LBD16<---------ARR14(2) --------->MYB52(1)   --------->HSFB2a(2) -DEAR3(1)<---------ATERF1(1) --------->DEAR3(1)--------->DEAR3(2)            <---------WOX13(1) -HVH21 ------>ZmHOX2a(1)    <---------LBD16  --------->ARR14(2)--------->ZAT18      <---------LBD16   gagaatcatcctcgacgccgccggtggaatcgccggagcaaggtagaagaaccggcgatagtagagcgaacagaagggagattgctatcgggaaatcttt  25591300                  <---------DAG2              --------->WRKY38(1)                   <---------ATHB12                                -              --------->WRKY12                    --------->WOX13(1)                       <---------ZAT14             *TSS <----------DOF2               ------------>CBF                           --------->ZAT14      <---------WRKY38(1)                       <---------YAB1               --------->MYB52(1) -----      <---------WRKY12                 ----------->GT1            <---------ZAT18      --------->ZAT6      <---------WRKY45               <------------CBF   ------>NtERF2       ------>ZmHOX2a(1)   <----   cattttagtcaacgagttgactttatcgctctctctctcgattgtaaattatcaatgaggccttcttgggcccttatcctatcggactaactctatagtg  25591400              <---------AHL20(2)         --------->AHL20(1)                                                       ------>ZmHOX2a(2)         <---------AHL20(1)                                                      <------ZmHOX2a(2)   ----------->GT1                                                              <---------ARR14(2)   <----------ID1              <---------AHL20(2)                               --------->ARR14(2)  ----------->GT1              --------->AHL20(2)                               --------->AGP1  <---------TOE2(3)        <---------AHL20(2)                                   --------->ARR11(3) --------->DAG2            --------->AHL20(2)                                   <---------AGP1 --------->DOF2       <---------AHL20(2)   --------->ZAT18   <---------AHL20(2) <---------ARR11(3)  < ---->ZAT18 <---------AHL20(2)<---------AHL20(2)    --------->ARR11(3)   <---------At4g35610       -- -----ZAT18 <---------YAB1<---------AHL20(2)    ---------->DOF2          --------->At4g35610       <-   cataaaggaaaaatattattttgttttatttatttattttgcaagtgttctaaagaaattgaattaatctcattaagctcaagatctatattctatacga  25591500                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                    <---------LBD16                             <----                                                  <---------ARR14(2)                            -----                                              ------>ZmHOX2a(2)                             ------->GAMYB                                             <------ZmHOX2a(2)                              <--------                                            --------->ARR14(2)                           <-----------GT1                                            <---------ARR14(2)                         --------->DOF5.7(2)                                       -------->P --------->ARR14(2)                  <----------DOF2            --------->YAB1             --------->MYB52(1)                             --------->TOE1(3)           <---------YAB1             --------->MYB52(1)                              --------->TOE2(3)   --------->YAB1                   <---------MYB52(2)                           <------ZmHOX2a(2) -----------GT1                    --------->At4g35610                          <---------ARR11(3) ------->AHL20(2)          --------->YAB1 --------->LBD16                       --------->ARR11(3) --------AHL20(2)         <---------YAB1<---------LBD16    <---------YAB1      --------->At4g35610   tttaaacatacttatcatatagtcatatatcataagaagctaaccggatccgagtccggttttgattcaatttcaattgtgagatcaactttaaccgaat  25591600                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              -------                                                                    <---------STY1(2)         <------                                                                --------->YAB1            >>>>>>>>>>E2Fc                                                            --------->AtMYB61             >>>>>>>>>>E2Fe                                      <-----------HVH21    ----------------->AGL2         ----------- ---->ATHB1                          <------MYB46(1)       ------------>CBF               >>>>>>>>>>E2Fd ----->ATHB12                        <------MYB83        --------->AtMYB61                >>>>>>>>>>E2Fa ----->ATHB51             --------->HSFB2a(2)           --------->MYB46(3)          ---------->DOF2 -----ATHB51   <----------ID1       --------->MYB59   <---------bZIP60(1)       --------->YAB1------- ---->ICU4 ---------->DOF2--------->ANAC46         ----------->HVH21--------->STY1(2)    ----------->GT1 -MYB59<---------------AGL15      <---------MYB52(1)  --------->bZIP60(1)      <---------YAB1--------   tattgaagcccattaaaggcacaaatttccacaactgttcggtcagtgtctcagtgacaccaccaatagtagctaggctatatcataagagcgggaaaat  25591700                                                                                ----------->HVH21                                                                               --------->LBD16                                                                              --------->TGA1a                                                                              --------->bZIP60(2)                                                                              <---------TGA1a                                                                              =======================                                                                           --------->PCF5                                                                          --------->ATERF1(1)                                                                          <---------TCP16(2)                                                                          <------NtERF2                                                                         ------>NtERF2                                                                         --------->ABI4(2)                                                                         <---------ATERF1(1)                                                                        <---------DEAR3(1)                                                                        --------->ALFIN1                                                                       <------NtERF2                                                                       <-------GAMYB                                                                       --------->ATERF1(1)                                                                       =================MYC_MYB                                                                      <---------MYB46(3)                                                                      <---------ATERF1(1)                                                                      <---------ORA47(2)                                                                      <---------DEAR4(2)                                                                     --------->ALFIN1                                                                --------->O2  --------->O2                                                                ========================bZIP_bZIP                               ===========================================MYC_MYB                               <------------AtMYB77             <---------O2 <------NtERF2          <                              ============================================MYC_MYB                  --                              <---------At5g28300               =====================================                              -------->P                        <---------bZIP60(2)               <--                             --------->MYB52(1)                 ===============MYC_MYB            <--                         <-----------GT1           --------->LBD16  <---------ABI4(1) --------->ALFIN1                        --------->ICU4            --------->ATERF1(2)<---------DREB2C(2)       ------ ----ARR14(2)      --------->ANAC55(1)            <---------ATERF1(2)<---------DEAR3(1)       <------ --->ARR14(2)      --------->ANAC58              <---------LBD16<---------TGA1a<-----------HVH21 <--- ---HSFB2a(1)      --------->ANAC46  <---------TOE1(3)   <-----------HVH21----------->TCP11(1)------- -->HSFC1(2)       <---------ANAC55(2)       <----------DOF2 ----------->HVH21<---------O2    ------- ---HSFC1(2)       --------->ANAC58  <---------TOE2(3)  <---------bZIP60(1)<---------PCF2   ------->TEIL >GT1   XXXXXXXXXXXXXXXXXXXX>MIR863-3P       ===========================================bZIP_DOF <--- -->HSFB2a(1)      --------->ANAC55(2)       =============================bZIP_DOF   >>>>>>>>>TAC1<-- --->ARR10    *TSS ----------->GT1<---------MYB52(1)    --------->bZIP60(1)--------->TCP16(1) <------   tcgcctactgaaaacaaaaaaacgtaattactaaccgttagggttttctttaccggcgatgtcgcgacgaggcggtggccccgtgacagtgttgaacgtg  25591800  Previous    Next  AGI:  At5g63910.1    Description:  FCLY; prenylcysteine oxidase. Identical to Probable prenylcysteine oxidase precursor [Arabidopsis Thaliana] (GB:P57681); similar to unnamed protein product [Vitis vinifera] (GB:CAO71675.1); contains InterPro domain Prenylcysteine lyase (InterPro:IPR010795); contains InterPro domain Prenylcysteine oxidase (InterPro:IPR017046) Range:  from: 25589091    to: 25591313    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g63920.1    Description:  DNA topoisomerase III alpha, putative. similar to DNA topoisomerase family protein [Arabidopsis thaliana] (TAIR:AT2G32000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68531.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ49689.1); similar to DNA topoisomerase III (GB:AAB03695.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain DNA topoisomerase, type IA, DNA-binding; (InterPro:IPR003602); contains InterPro domain Toprim subdomain; (InterPro:IPR006154); contains InterPro domain DNA topoisomerase, type IA, central region, subdomain 1; (InterPro:IPR01 Range:  from: 25591714    to: 25598504    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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