Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------MYB52(1)                                       <-------GAMYB          <---------ANAC58            <---------DEAR3(2)          <---------ANAC58            <---------MYB46(3)  ------>ZmHOX2a(2)                  <---------TOE2(2) <------ZmHOX2a(2)                   <---------DEAR3(1) ---------ARR11(3)                <---------O2 --------->At4g35610 -------->GLK1(2)                 <---------bZIP60(1) ---------ARR14(2)                --------->bZIP60(1) -------->ARR11(3)<-------TEIL    --------->O2 --------->ZAT2 ---------AGP1   <------ZmHOX2a(2)============================bZIP_DOF   --------->ATHB12        ---- -------->ARR14(2)------>ZmHOX2a(2)<-----------HVH21                     <---------ICU4 <---------DEAR3(2) -----ZmHOX2a(1)<---------ARR14(2)<---------TGA1a                       <---------YAB1  ----------->GT1 ------TOE2(3)  --------->ARR14(2)--------->TGA1a  ---------->DOF2    --------->YAB1<---------SPL7 -->CCA1(2)=================================bZIP_DOF                 <-------TEIL --------->DEAR3(2) ------WRI1<----------DOF2        =============MYC_MYB <------ZmHOX2a(1)--------->ICU4--------->SPL7   aggatctgtctggctttggatccatttactcaaacgacgtcggttaaccagctaaaaggattcaaatcaaattcatgattccaaaccggccggtttaata  25580600                                                --------->ANAC58                                                --------->ANAC58                                                --------->ANAC46                                              --------->ANAC55(2)                                 <--                   ----------->TGA1           <---------ANAC55(2)                      <------NtERF2                   ----------->HVH21          --------->ANAC58                       --------->ALFIN1                 <---------ANAC58             --------->ANAC58                  ---------->DOF2 <----                 <---------ANAC58          <---------ATHB12             <---------GLK1(2)      <-----         <----------DOF2         <---------ANAC58                       <---------ARR11(3) ------>MYB46(1)        --------->TOE2(3)        <---------ANAC46                       --------->ARR11(3) ------>MYB83   --------->MYB46(3) <---------bZIP60(2)--------->WOX13(1)          --------->HSFB2a(2)   -------->P ----->MYB52(1)  <---------ANAC46<---------ANAC58         ---------->DOF2--------->GLK1(2) --------->MYB52(1)   aacgaacaaaccttttttgtcgtgacgctgcaatagcgttttgcaatcacgcgctatcgaaaacgcgagttcgagattttgttaaaggtggccaaccggt  25580700                                                                 <---------ANAC58            --------                                                                 <---------ANAC55(2)         --------                                                                 <---------ANAC58            --------                                                              <---------MYB52(1)            <-------- -------MYB46(3)                               >>>>>>>>>EIN3 <-------GAMYB    <---------At4g35610 -----MYB52(1)                               <<<<<<<<<<<<<<<<<LFY--------->ANAC55(2)       <--------- ----MYB52(1)                         <---------MYB59       ----------->GT1   --------->At4g35610   ttgttctggttttgatataaacttgaacaaaattgggagaccgaattatacattggtctattcggttacttatcgatttcagcttgattttgtttacggt  25580800     --------->ANAC58     --------->ANAC58     --------->ANAC46 ------->AtSPL8                              --------->ALFIN1 ------->AtSPL3                  <---------AHL20(2) ->ANAC46                    <---------AHL20(2)               ------>MYB83                          < -------------WRI1 <------MYB83 <---------AHL20(2)            ------>MYB46(1)                   <---- --GT1             <------MYB46(1)         --------->ALFIN1--------->DEAR3(2)           <-----------GT1   actatccaaggaatttttgtttggtttcgatttttttatttttcagtgtggatgaaatcaaaccgactaaaatcggttcgatatcgatttttacattttt  25580900                                             ------------------------>ANAC81                                  <---------------AtSPL3                                  <---------------AtSPL8                               <---------CCA1(1)                               <---------RVE1(1)                                                <----             <----------DOF2  --------->ARR11(3)                                               ------       <-------TEIL<---------------AGL15    --------->DAG2                        <<<<<<<<<<MYB80 ---------SPL7     ------>ZmHOX2a(1)       ---------->DOF2 *TSS               <----------DOF2  ------ -------GT1  <---------DAG2   <---------ARR11(3)  ---------->DOF2     --------->DAG2          -------   tcggtccggttcatgcttttcctctattttgagatatttgtactgaaaagcagaaagagagaagaaacacaaaaattggactttggtttgaaattggcga  25581000                                                                                          <------MYB83                                                                                          <---------MYB46(3)                                                                                          --------->MYB52(2)                       --------->YAB1                                                     <------MYB46(1)                       <---------ICU4         --------->ARR11(3)                         <---------TOE2(2)                      <---------ATHB12        <---------ARR14(2)                         <---------TOE1(2)         --------->ARR11(3)                  <---------CCA1(2)                          <---------MYB52(1)        <---------GLK1(1)                 <------ZmHOX2a(2)                         --------->ARR14(2) --NtERF2--------->GLK1(2)               <---------ARR11(3)                   <-----------GT1 ----->RAV1(1)        --------->ICU4     --------->ARR11(3)       <---------At4g35610 --------->ATHB12 >NtERF2--------->GLK1(1)        --------->TOE2(3)             <---------At4g35610  <---------ARR11(1) -->ETT(2)          --------->YAB1   ---------->DOF2        <------------------------ANAC81   catttttgggaaatctagagactaataatcaatttcgtcaaaagatcaaatcttgctaaattttcttctgctcgtttgattttccgaatcgttggtttcg  25581100                                                     <-------TEIL                                                    <--------P                                                   <-------GAMYB                                <----                                                  <---------MYB46(3)                            <----                                                 <---------TOE2(2)                          <--------                                             <---------LBD16                                ---------                                            --------->MYB52(1)                             --------->ANAC58                                           <------ZmHOX2a(2)                               --------->ANAC58                                          <-----------HVH21                            --------->ANAC58                                          --------->ARR11(3)    --------->GLK1(2)      --------->ANAC46             --------->ALFIN1        ----------->RAV1(1)       <---------GLK1(2)       --------->ANAC58        ---------->DOF2             --------->MYB46(3)   ------>ZmHOX2a(2)        ---------->DOF2 ---   ataagtgaagaaaagatggggaatttgttcgtgaagaaaccacagatcacggaggttgatcgagcgattctctctctcaaaacccaaagacgcaagcttg  25581200                                                                             <------ZmHOX2a(2)                                                                             ========================   <---------ARR11(3)                           <----------DOF2             <---------ARR11(3) --MYB46(1)                           --------->TOE2(3)           <---------HSFB2a(2) --MYB83     ----------->GT1        --------->ARR11(3)            --------->HSFB2a(2) -ZAT2 <---------At4g35610          <---------ARR11(3)         <----------DOF2              <-------TEIL >ZAT2 --------->At4g35610         <---------CCA1(2)        <---------ARR11(3)          <---------YAB1 ------>WRKY18(1)  <---------AHL20(2) --------->YAB1  <-----------GT1       --------->ARR11(3) ------   gtcaatatcagcagaaggttttttattctctcttcttatatcttaattttcttttgttacaatttcttttggaacccagatcatatagttttgattcatc  25581300                                                             <---------ANAC46                                                    <---------MYB46(3)                                                   <---------WOX13(1)     <---------YAB1                               >>>>>>>>>ARR1     ------>ZmHOX2a(1)                            >>>>>>>>>ARR2                                 <---- <---------ARR11(3)                              --------->ATHB12         ---------->DOF2    <------- ===========HOX2a_HOX2a                     <---------ANAC46 <---------ZAT6                  -------- --->AtLEC2                     <-----------GT1 <---------YAB1        ---------->DOF2 <----------DOF2   caaaatcctaattggagattggatttgattcgtttcacaatatgtgtcttatgattgttagtagtgtgatggaaaagaaagactcaagcttttgagttct  25581400                                                                             --------->ZAT2                                                                             --------->At4g35610                                                                             <---------At4g35610                     <------ZmHOX2a(2)                                      --------->ANAC58                    --------->ARR11(3)                                      --------->ANAC58        -                    <---------ARR11(3)                                  --------->ANAC58          ---                    <-----------ARR10                                   --------->ANAC58        -----         <----------DOF2                                               --------->DAG2          ------     <---------CCA1(2)------>ZmHOX2a(2)                       ---------->DOF2<---------ZAT2    <----- ------DOF2         <---------ARR14(2)         <---------ANAC58  <---------At4g35610           <----- --ARR11(3)         --------->ARR14(2)         <---------ANAC58  --------->At4g35610           <----- ->ARR11(3)    <-----------GT1 <---------AHL20(2)    ---------->DOF2  ---------->DOF2          <-----   ttggctcatctctttgttaaccgatcttctcattttttttgctaatttagcttgagaaagtaattgaagcggaaaagcaagctgcaagagacttaatccg  25581500  Previous    Next  AGI:  At5g63880.1    Description:  VPS20.1. similar to VPS20.2 [Arabidopsis thaliana] (TAIR:AT5G09260.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81116.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 25580959    to: 25582724    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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