Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <------------                                                                                    --------->ZAT2                                                                                    <---------ZAT2                                                                                    <---------GLK1(1)         --------->MYB52(1)                                                         <---------At4g35610     <---------TOE1(3)                                                              --------->At4g35610     <---------TOE2(3)          --------->AtLEC2                                    --------->GLK1(1) -------->YAB1          <-------TEIL               ----------->RAV1(1)       --------->MYB52(2) -->ANAC58             <--------P                 --------->ANAC46         <---------MYB52(1)-------- -->ANAC46           ----------->GT1              --------->ANAC58       <---------MYB46(3)<---------ALFIN1 -->ANAC58         <------ZmHOX2a(1)              --------->ANAC58------->TEIL <---------ZAT6--------   aatagtgaaggtaactgggaaggaggtagattccatgaagaccattcgaaacacgacataagcccatgtacccagtcgttagtgagagctcccccatctg  25580100                                                                              ----------->GT1   ----- -----AGL1                                   --------->ZAT6       --------->LBD16               ----- ->ZAT2      <---------AtMYB61        --------->At5g28300  <---------ICU4    --------->TOE1(2)  ----- --->RAV1(2) --------->ALFIN1        ----------->GT1    --------->YAB1     ------->TEIL        ------   gccatgtaatgggagatggtggaacagtttccattaaaactgtaaaaacactaatctataatcaattccagagtatgaacatgtgaaacaagagtatcaa  25580200                                                                             --------------->AtSPL8                                                                     --------->ARR11(3)                                           ----------->RAV1(1)       <---------ARR11(3)                                           ------>NtERF2     ------->TEIL    --------------->AtSPL3                                       --------->ANAC58      --------->ARR14(2)  --------->YAB1                       --------->ANAC46      <---------ARR14(2) ---->ANAC58                           --------->ANAC58      <---------ARR11(1) ---->ANAC58                         ---------->DOF2         --------->GLK1(2)        --------->TOE2(3) ---->ANAC46                       <------ZmHOX2a(2)        <---------ARR14(1)     <---------ARR11(3) --->WOX13(1) ---------->DOF2  <---------At4g35610   --------->AHL20(2)  <-------TEIL <----------DOF2   gcaatcgaaacatagacaaagttttcaaatttcagcgatcaaagccaccagaacataaaatcgaatctgtatatattcattcgtacatctttaaactcaa  25580300                                      --------->GLK1(1)                                      <---------GLK1(1)           <----------ID1 --------->TOE1(2)          ----------->GT1--------->YAB1                     <---------LBD16         --------->DAG2  --------->ATHB12                <--------ATHB1                    --------->ALFIN1         <---------------AtSPL8 --------->GLK1(1)     --------->YAB1              --------->LBD16        ---------->DOF2  <---------ICU4           ---------->DOF2                --------->DEAR3(1)   ----------->GT1      <---------ATHB12    <---------CCA1(2)                  --------->MYB52(1)   gagaagagcaaaaagtacaaaatcgaatcatgggaaatcgaaatccatatcacaaagaataattcggaacagagtgagactcaccggctaagagtggaga  25580400                                                                                      <---------DEAR3(1)                                                                                      --------->DEAR3(1)                                                                                     <---------------                                                                                     --------->ATERF1(1)                                                                                     <------NtERF2  -                                       --------->ZAT2                              <---------DEAR3(1)                                 ------>MYB83                                    <-----------HVH21  <                                 ------>MYB46(1)     <---------ANAC58        <---------ALFIN1       <                        ------>ZmHOX2a(2)            <---------ANAC58      ------>NtERF2            <                      <---------ARR11(3)    <---------ANAC58              <---------ETT(1)          -                      --------->ARR11(3)    <---------ANAC58              --------->ANAC46          -                      --------->ARR14(2)   <---------At4g35610            --------->ANAC58         ==                      <---------ARR14(2)   --------->At4g35610            *TSS------>NtERF2        ==                      <---------AGP1  --------->ANAC58                    ----------->HVH21      <---             ---------->DOF2   <---------MYB59   <----------DOF2 <----------DOF2--------->DEAR3(1) <-  <-----------GT1    <---------CCA1(2)--------->ANAC58<----------DOF2     --------->ANAC58    -------   caatttacaaaattccaaagcttggatcttggacctagctaagctagcttactttgctttctctctgctttcagtcccgacaccgtcgtcgacgagattt  25580500          <---------ANAC58              <---------MYB52(1)          <---------ANAC58             <-------GAMYB  ------>ZmHOX2a(2)                   <---------MYB46(3) <------ZmHOX2a(2)                    <---------DEAR3(2) ------WRI1<----------DOF2        --------->TGA1a -------->ARR11(3)                <---------TGA1a  ---------->DOF2 ---------ARR11(3)                --------->bZIP60(1) ---------ARR14(2)                <---------O2 --------->At4g35610 ---------AGP1    ------>ZmHOX2a(2)  <---------DEAR3(1) -------->ARR14(2)<-------TEIL    <---------bZIP60(1) -------->GLK1(2)<------ZmHOX2a(2)=============MYC_MYB                   <---------ICU4 ----------->GT1 ========================HOX2a_HOX2a <---------TOE2(2)                   --------->ATHB12        ---- =======================HOX2a_HOX2a<-----------HVH21                    --------->ICU4  <---------DEAR3(2) ------TOE2(3)  --------->ARR14(2)============================bZIP_DOF--------->YAB1<---------SPL7 -----ZmHOX2a(1)<---------ARR14(2)--------->O2 --------->ZAT2        <-------TEIL --------->DEAR3(2) -->CCA1(2)=================================bZIP_DOF   <------ZmHOX2a(1)<---------YAB1--------->SPL7   aggatctgtctggctttggatccatttactcaaacgacgtcggttaaccagctaaaaggattcaaatcaaattcatgattccaaaccggccggtttaata  25580600                                                --------->ANAC46                                                --------->ANAC58                                                --------->ANAC58                                              --------->ANAC58                                    <--                   ----------->TGA1           --------->ANAC55(2)                      <------NtERF2                   ----------->HVH21          --------->ANAC58                       --------->ALFIN1                 <---------ANAC58             <---------ANAC55(2)               ---------->DOF2 <----                 <---------ANAC58          <---------ATHB12             --------->ARR11(3)     <-----         <----------DOF2         <---------ANAC46                       <---------GLK1(2)  ------>MYB46(1)        --------->TOE2(3)        <---------ANAC58                       <---------ARR11(3) ------>MYB83   --------->MYB46(3) <---------bZIP60(2)--------->WOX13(1)          --------->HSFB2a(2)   -------->P ----->MYB52(1)  <---------ANAC46<---------ANAC58         ---------->DOF2--------->GLK1(2) --------->MYB52(1)   aacgaacaaaccttttttgtcgtgacgctgcaatagcgttttgcaatcacgcgctatcgaaaacgcgagttcgagattttgttaaaggtggccaaccggt  25580700                                                                 --------->ANAC55(2)         --------                                                                 <---------ANAC55(2)         --------                                                                 <---------ANAC58            --------                                                              <---------MYB52(1)            <-------- -------MYB46(3)                               >>>>>>>>>EIN3 <-------GAMYB    <---------At4g35610 -----MYB52(1)                               <<<<<<<<<<<<<<<<<LFY<---------ANAC58          <--------- ----MYB52(1)                         <---------MYB59       ----------->GT1   --------->At4g35610   ttgttctggttttgatataaacttgaacaaaattgggagaccgaattatacattggtctattcggttacttatcgatttcagcttgattttgtttacggt  25580800     --------->ANAC58     --------->ANAC46     --------->ANAC58 ------->AtSPL3                              --------->ALFIN1 ------->AtSPL8                  <---------AHL20(2) ->ANAC46                    <---------AHL20(2)               ------>MYB46(1)                       < -------------WRI1 <------MYB83 <---------AHL20(2)            ------>MYB83                      <---- --GT1             <------MYB46(1)         --------->ALFIN1--------->DEAR3(2)           <-----------GT1   actatccaaggaatttttgtttggtttcgatttttttatttttcagtgtggatgaaatcaaaccgactaaaatcggttcgatatcgatttttacattttt  25580900                                             ------------------------>ANAC81                                  <---------------AtSPL3                                  <---------------AtSPL8                               <---------RVE1(1)                               <---------CCA1(1)                                                <----             <----------DOF2  <---------ARR11(3)                                               ------       <-------TEIL------>ZmHOX2a(1)        --------->DAG2                        <<<<<<<<<<MYB80 ---------SPL7     <---------------AGL15   ---------->DOF2 *TSS               <----------DOF2  ------ -------GT1  <---------DAG2   --------->ARR11(3)  ---------->DOF2     --------->DAG2          -------   tcggtccggttcatgcttttcctctattttgagatatttgtactgaaaagcagaaagagagaagaaacacaaaaattggactttggtttgaaattggcga  25581000  Previous    Next  AGI:  At5g63870.1    Description:  PP7 (protein phosphatase 7); protein serine/threonine phosphatase. Identical to Serine/threonine protein phosphatase 7 (PP7) [Arabidopsis Thaliana] (GB:Q9FN02;GB:O49346;GB:Q3E865); similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT1G48120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68512.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186) Range:  from: 25578387    to: 25580474    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g63880.1    Description:  VPS20.1. similar to VPS20.2 [Arabidopsis thaliana] (TAIR:AT5G09260.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81116.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 25580959    to: 25582724    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version