Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->ZAT2                            --------->At4g35610                           --------->ANAC58                           --------->ANAC46                           --------->ANAC58  <---------ALFIN1       <---------At4g35610                                                        < ----->ZmHOX2a(1)      <-----------GT1                           <----------ID1                    -- -------->HSFB2a(2)  <-----------HVH21                 --------->ATHB12    --------->MYB52(1)     --- >ZmHOX2a(1) --------->MYB46(3)       --------->YAB1   <---------ICU4 ---------->DOF2     ---------->DOF2   tcctcgaccccaagaacaaacaatgtcaccagctacaaaatcaaaacataaaactactcattagtagacgacgaaagtaagggaaactcgattaaaggcc  25575600                                                       <---------MYB52(1)                                             <-----------GT1                       --------->DEAR3(1) <---------GLK1(1)            <---------HSFB2a(2)           --------->GLK1(1)                       <----------ID1            --------->HSFB2a(2)          <---------ARR14(2)                       ----------->GT1        <---------ARR14(2)               --------->ARR14(2)            --------->LBD16        --------->ARR14(2)     ---------->DOF2        --------->LBD16 <---------ANAC55(2) ------ZmHOX2a(2)  --------->ZAT18   <---------At4g35610   <---------YAB1        ----------->GT1 ------->AGP1      --------->ZAT14   <---------LBD16<---------LBD16   --------->ANAC55(2) ------>At4g35610  <---------ZAT14   --------->At4g35610   --------->ICU4      ---------->DOF2      >   agatcaagagaattcgcgaagagcacagcctactaaagcagcggatttcacaattccggtgattatttgagtccgtaatagaaaaggaaaaaaaacagcg  25575700                                                                                          --------->ATERF1(1)                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                               <---------MYB52(1)                                                                              --------->At5g28300                                                                              <---------RAP2.6(3)                                                                             --------->ANAC55(2)                                                                             --------->RAP2.6(2)  <--                                                                             ----------->GT1      ---                                                                             <---------ANAC55(2)  <--                                             <---------LBD16              --------->ARR14(2)     <---                                             <---------At4g35610          <---------ARR14(2) <------NtERF2                                      --------->ANAC58                   --------->ATERF1(1)---------                         ----------->HVH21 <-----------RAV1(2)         --------->ALFIN1   <------NtERF2            <---------SPL7            --------->ANAC58            <---------TOE2(1)       --------->At4g35610           <---------ANAC46         <---------ANAC58        ------->TEIL <------ZmHOX2a(1)<---------At4g35610          <-----------------------TaNAC69(2) --------->At4g35610  <---------ANAC46       ------>NtERF2          <---------------AtSPL8    <---------ANAC58<---------YAB1<---------TOE1(1)      <---------ATERF1(1)          --------------->AtSPL3 --------->ALFIN1 <---------At4g35610 <------ZmHOX2a(1) <---------DEAR3(1) >>>>>>>>TBF1 <-------TEIL     --------->ALFIN1--------->LBD16<---------DAG2<------NtERF2<---------DEAR3(2)   aagaagaagagagacgtacagagaagagcgacggagtggctagcaccagcggagatgataagaaccttacgaggaggagccgtaacttcgtcggcagcca  25575800     ------>NtERF2     --------->LBD16    --------->ANAC58                                                                         --------    --------->ANAC46                                                                         <-------    --------->DEAR3(1)                                                            ===================    --------->ANAC58                    <---------AHL20(2)                   --------->HSFB2a(1)   <---------LBD16                  <---------RVE1(1)                        <---------HSFC1(2)  ------>ZmHOX2a(1)                 <---------CCA1(1)                        <---------HSFB2a(1)  ==================HOX2a_HOX2a    --------->ARR11(3)                    --------->ANAC58   <-------- -------ARR14(2)                   <---------ARR11(3)                ----------->GT1  <---------AHL20(2) ------>ARR14(2)                 --------->ANAC58                   --------->DAG2<---------------AGL15 -------ARR11(3)             <-----------GT1  <---------LBD16      ---------->DOF2--------------->AGL15 ------CCA1(2)------------>AtMYB77 <---------AHL20(1)         ----------->GT1--------->HSFC1(2) >RAP2.6(2)  <------ZmHOX2a(2)   --------->ANAC58         ------->TEIL   --------->ANAC58<---------YAB1   tatcctccgccatggatcacagttgcagttttcacaagatattttttttggggagaaatgaattttgaaaaaagtaagaaatttctattttttgataaat  25575900                             --------->LBD16                            --------->ANAC55(2)                                              <------NtERF2                            --------->TOE2(3)                                               ------>NtERF2                         --------->ARR14(2)                                     ----------->GT1                         <---------ARR14(2)                                   *TSS     ---------->DOF2            <---------ANAC58<---------ANAC55(2)                             <---------MYB46(3) ->AHL20(2) <---------ANAC58--------->ANAC46          ---------->DOF2      <--------P ---------->DOF2 --AHL20(2)<---------At4g35610<---------MYB52(1)   --------->ANAC58       --------->At5g28300-------- =======MADS_MADS    --------->ZAT6                --------->ANAC58  --------->DAG2   <---------ICU4 -------AGL15     <----------DOF2          <-------GAMYB            ---------->DOF2  --------->ICU4--   tgggaaattttgtagcttctctttcactatccgtaatctctcgagggttgaacaaggaaagacagagagagaaagcggtagatggtaataaaggcgcgat  25576000                  <---------ARR14(2)                  <---------ARR11(3)                  --------->ARR14(2)                  --------->ARR11(3)                                         --------->At5g28300         <-------MYC3                                                       ----------->GT1         <-------MYC4                                                     --------->SPL7         ------->MYC3                                                     --------->ZAT14         <-------MYC2                        <---------ANAC58           <---------SPL1(2)      <-----         ------->MYC2           <---------DAG2                         ------->GAMYB          <------  --------->CCA1(2)             <----------DOF2                       --------------->AtSPL3  <------ <---------ARR14(2)     <----------DOF2 <---------DAG2               <---------At5g28300      <------ --------->ARR14(2)     <---------DAG2  <----------DOF2<---------AHL20(2) <---------ZAT14    -------- --->HVH21 <-----------HVH21 <-----------GT1 <---------ANAC58       <-----------GT1          -------- --------->ARR10 <---------CCA1(2)   <-----------GT1  <---------AHL20(2)<---------SPL7<----------DOF2   ggagatttgcacatgtcatatatctgctttttgacttttttacttttgctggtttttttattttttgttttaaccgtacagtaaatctcttttttgtcgt  25576100                                                            ---------->DOF2                                                    ----------->HVH21                                                   <---------MYB59                                                   --------->AtMYB61                                              --------->ANAC55(2)     <---------AHL20(2)                       <---------ANAC55(2)   <----------DOF2                            --------->ANAC46 ----SPL7                                  <---------ARR14(2) ---ANAC58                                 --------->ARR14(2)                      <-----------GT1 ---ANAC46                             ----------------->AGL2                 --------->ATHB51 ---ANAC58         --------->PCF2  <---------ICU4------->TEIL--------->DAG2   <---------ICU4 ------->AtSPL3--------->DAG2      <---------AHL20(2)    --------->LBD16   --------->YAB1 -->ID1      ---------->DOF2 --------->ANAC55(2) <-----------ARR10      <----------DOF2     <--------   acaggctttaattgcaaaagggtccctcttcacttaataaatccaaatacggacctcaccggtaaagttttatactttcataatttcaccatttcttttt  25576200                                                          ----------->HVH21 <---------ANAC58                                                        --------->ANAC46    <---------ANAC58                                                     <---------ZAT18   ----------->GT1                                                     --------->ZAT14   ------>ZmHOX2a(2)                      <-----------GT1                <---------ZAT14 <---------ARR11(3)         <----          <---------WRKY18(1)                 --------->ANAC58    --------->HSFB2a(2)          <-----       <---------ANAC58                       --------->ANAC58    <---------HSFB2a(2)<XXXXXXXXXXXXXXX --DOF2<---------ANAC58                       --------->ANAC46 --------->GLK1(2)   <----------DOF2   ttttttgtttcttgaccatttcatttacctcttcacataagtagatttaagccagtacacatgacattctagatcgtaacttgtgttttatgtgttcatc  25576300                                                                     --------->ZAT14                                                                ---------->DOF2                                                           <-------MYC2                                                           ------->MYC2                                                           <-------MYC4                                                           ------->MYC3                                                           ------->MYC4                                                           <-------MYC3     <---------MYB52(1)                                                          --------->TGA1a --------->ANAC58                                                          =================bZIP_DOF                                                          <---------TGA1a --------->ANAC58                                                          <---------O2    --------->ANAC55(1)                                                          --------->O2 <---------REM1(2)      --------->ALFIN1              --------->YAB1        <---------ANAC55(2)      <---------REM1(1)--------->TOE1(2)                  --------->ANAC55(2)  <-----------RAV1(2) ------>ZmHOX2a(2)                  ------------>OsbHLH66        --------->AHL20(2) -----ICU4          --------->ARR11(3) <---------TOE2(2)<---------ALFIN1  --------->ANAC46          - ----YAB1           <---------ARR11(3) <---------TOE1(2)<------------OsbHLH66 --------->MYB52(2)   <- XXXXXMIR823  <-------TEIL         <---------ATHB12 --------->AtLEC2 --------->ARR14(2)   --------->GLK1(2)   attcacaggtgtaaggcgcatagatcgtaagagcctaatcatatgtttttagtcatgcacacgtgtgaaagtatacacgttagtcaaaaaaaattctgag  25576400                  <---------ARR14(2)                  --------->ARR14(2)                                                --------->AHL20(2)        ---------->DOF2     ---------->ID1                                  <----------ID1 -------->YAB1   --------->GLK1(1)      <---------YAB1                 ---------->DOF2   <---------LBD16 ------TEIL ----------->HVH21 <----------DOF2          <---------At4g35610  ----------->GT1   tttcatagtccaaagtgacatatccaatttgtctttttagttataaatattcagttcagctattttagtttttcaaagaggtcaaattaaacctggatta  25576500  Previous    Next  AGI:  At5g63860.1    Description:  UVR8 (UVB-RESISTANCE 8). similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G12350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67581.1); similar to Os04g0435700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052849.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71669.1); contains InterPro domain Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091) Range:  from: 25571734    to: 25575978    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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