Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------AHL20(2)                                                                        <---------AHL20(1)                                                                     --------->ATHB51                                                                     --------->YAB1                                                                     <--------ATHB1                                                                     <---------AHL20(1)                                                                     --------->AHL20(2)                                                        <---------DAG2  <---------AHL20(2)                                                        <----------DOF2 --------->AHL20(2)          -                        --------->ARR14(2)           <-----------GT1 <---------ICU4                 <           <---------ANAC58               <----------DOF2           <---------ATHB51                < ----------GT1          <---------ARR14(2)--------->TOE2(3)         <---------ATHB12          <------ ----DAG2  <---------ANAC46            --------->ARR11(3)   <---------ANAC58                  <------ -----DOF2 <---------ANAC58            <---------ARR11(3)   <---------ANAC58              <----------DOF2   tttcccaaattttgcttagacaagtgtatatgcaaaatgaagaactttaatcgaataacttttcttgtcaataatttttttttttttttttgctttaagg  25546900                                                                            <---------ICU4                                                                          --------->ARR11(3)                                                                          <---------ARR11(3)                                                                         <---------GLK1(1)                                                                      --------->ANAC58                                                             <---------AHL20(2)                                                             <---------AHL20(1)                                                             --------->AHL20(1)                                                             --------->AHL20(2)     <-----------GT1                                        <---------AHL20(2) -------->AHL20(2)                                          --------->AHL20(2) ---------AHL20(2)                                  ----------->GT1   --------->ANAC46 ---------YAB1--------->AHL20(2)                --------->AHL20(1)    --------->ANAC58 ---TOE2(3)  <---------AHL20(2)                 --------->ARR11(3)<-----------GT1        --------->ATHB12 ---TOE1(3)  --------->AHL20(2)        --------->AHL20(2) --------->YAB1 --------->GLK1(1)   ttttaattaacctatttaaaatacaatttgatatgttgaaatttaaaacatatattgtaaaaataaatttacaagaaatctttacaaaacaagattggac  25547000                <---------ARR11(3)                                               --------->ZAT14                --------->ARR11(3)                                               <---------ZAT14                <---------AHL20(1)                                              <----------DOF2                --------->AHL20(1)                                              <---------DAG2          ----------->GT1                                                    <-----------GT1    ---------->ID1                                                     <---------ANAC55(2)  <-----------RAV1(1)                                                  --------->ANAC55(2)  <--------   cattttgttgttttgaaaaatattcaacttgctcatttttagcattgacttgaacttattcaacataagtatcacttaatcactttactaattcaactga  25547100                                                     <---------YAB1                    --------->GLK1(1)              <---------ICU4                    --------->KAN4(1)              --------->ATHB12                   --------->ARR11(3)             <---------YAB1                   <---------KAN4(2)              --------->ICU4                   --------->ARR14(2)          <-------TEIL                   <---------ARR11(3)      <---------TOE1(3)                 <------ZmHOX2a(2)                   <---------ARR14(2)      <---------TOE2(3)                <---------ARR11(3)       <----------DOF2    <---------At4g35610 <--------P                    --------->ARR11(3) -At4g35610 <---------AtMYB61            ---------->DOF2      --------->TOE2(3)   tcaaaacttcttttttggtgggatattcaactgatcaaaacagtaaaggttgattattagtttgccttagaagttgaagatcatatagatgctagtcaaa  25547200                                                                                               ------                                                                             <-----------GT1  <------ZmHOX2a(2)                                                                        --------->AHL20(2)   --------                                                                        <-----------TBP      <-------                                        ---------->DOF2              <------ZmHOX2a(1)      <------ZmHOX2a(1)                                 --------->TOE1(2)                   ================================                                --------->YAB1              --------------->AGL15       ------->GAMYB                      <-------GAMYB--------->SPL7   --------->YAB1   ================================HOX2a_HOX2a            --------->MYB59     ----------->GT1 ---------->DOF2   <---------LBD16*TSS----------->RAV1(1)        <----------DOF2 <---------REM1(1)  ----------->GT1  =========================================   ttagaaggggcattttggtaattcagttgtagaatcgtaagacaaaggtgaaaagcataatgctattttcaggattatataacacatcaacagaggatcc  25547300           --------->ATHB12           <------------ATHB5           -------->ATHB1           <---------ICU4           --------->YAB1          <---------ATHB12          <<<<<<<<<<AGL22          <---------YAB1          <<<<<<<<<<AGL20          <---------ATHB51          <<<<<<<<<<AGL24          --------->ICU4       <---------------AGL15       --------------->AGL15       ------------>ATHB5      ----------------->AG      ----------------->AGL3      ----------------->AGL2      =================================================MADS_MADS      <-----------------AGL1          --------------->AGL15 <---------DAG2         <---------ATHB12      <---------At4g35610               <---------AHL20(2) <----------DOF2      --------->WOX13(1)   ---------->DOF2                   --------->AHL20(2) >ZmHOX2a(2)      --------->ANAC58    <---------------AGL15        <---------CCA1(2) ->ARR14(2)<--------ATHB1            <-----------------AGL3    --------->TOE2(3)<---------YAB1 --ARR14(2)--------->ATHB51          ----------------->AGL3 <---------CCA1(2)<---------AHL20(2) =HOX2a_HOX2a     --------->ANAC58  <<<<<<<<<GATA-1     --------->TOE2(3)    --------->AHL20(1)  ---- =======================MADS_MADS  <-----------GT1   <---------CCA1(2)--------->TOE2(3) --------->ANAC46   aaacttttcccaattattgcaagtcaatcgatttgtttatctatataaagctcccaaatctcaaatctcaaatctcaaattttttattaaacgcctacat  25547400                                   <---------ANAC58                           <---------ANAC58                                   <---------ANAC46                        ------->MYC2                                   <---------ANAC58                        <-------MYC2                          --------->DAG2                                   <-------MYC3                      --------->YAB1                                       ------->MYC3                     <------ZmHOX2a(2)               <---------ZAT18    <---------ALFIN1                    <---------ARR11(3)               --------->ZAT18  --------->ANAC58 ------->MYC3                    --------->ARR11(3)           <---------AHL20(2)   --------->ANAC58 <-------MYC3       <---------ALFIN1  ---------->DOF2   <---------AHL20(2)       --------->ANAC46--------->ANAC46 ----->AHL20(1)    <---------At4g35610     --------->AHL20(2)    <-------TEIL <---------ANAC58   atattactcacacttgttttcagatcataaagttttttcttggatttatatataatgcactaatacatacacacccacatgcttacacacatgttcgaac  25547500                                                                                                <----                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                     --------------->AGL15                                         ---------->DOF2                             <---------YAB1                                  <------ZmHOX2a(1)                        <---------ANAC46 <--------        ---------->DOF2   ------------------------>ANAC81                  <---------YAB1  <---------ANAC46   <---------ICU4        <------ZmHOX2a(1)                         <---------LBD16  -----------------  --------->ICU4       ------------------------>ANAC81    <---------SPL7<--------P  <----------------   tgtaatcagtaaaagaaacatcagagaggaagagaaggagaagaaaagatggagatgggtcgtctggtcttcgggttgtgtttgattcttattgtgggta  25547600                             <------NtERF2                             --------->RAP2.3(1)                            <---------ORA47(2)                            <---------ATERF1(1)                            <---------DEAR4(2)                            <---------ERF1                            <---------RAP2.3(1)                            ------>NtERF2                           <---------ANAC46                           <---------RRTF1(3)                           <---------RAP2.3(3)                           <---------RAP2.3(2)                          <---------ABI4(1)                          --------->ATERF1(1)                         <---------RAP2.3(1)                        <---------DEAR3(1)                 xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 <---------MYB46(3)                 <---------ORA47(2)                 <---------DEAR4(2)                 <---------DEAR3(2)                 --------->SPL7                <---------DEAR3(1)                <---------SPL7  <---------ANAC58     --------->SPL7      --------->TOE1(2)  <---------ANAC58  --------->ABI4(2)      --------->TOE2(2)                                     ----  <---------ANAC46 --------->ALFIN1        <---------SPL7                                      ------ ---TEIL        --------->ALFIN1          <---------ANAC58                                   <------- -------AtSPL3 <---------ABI4(1)          <---------ANAC58                        <---------HSFC1(2) -MYB46(3)   <---------DEAR3(1)          <-----------------------TaNAC69(2)       --------->HSFC1(2) ------>AtSPL8--------->LBD16--------->ATERF1(1)  ----------->HVH21               <---------HSFB2a(1) -------AtSPL8------>NtERF2<---------DEAR3(1) ----------->HVH21                   --------->HSFB2a(1) ------>TaNAC69(2)<------NtERF2         --------->MYB52(1)<----------DOF2         <---------At4g35610 -AGL3      <---------LBD16--------->DEAR3(1)--------->SPL7  --------->YAB1    <------ZmHOX2a(1) <---   cgtttcttgaattctccggcggtgctacggcggcgaagggagtaacgtacgacggacggtctttgataatcgatggacagaggaagcttctcttctccgg  25547700                         --------->LBD16                    <---------ALFIN1                   <---------ZAT18                   --------->ZAT14                  <---------ALFIN1                 <---------At4g35610                 --------->At4g35610                                        <-----------GT1             --------->ANAC46                                            <---------ICU4        <---------ARR14(2)                                               --------->YAB1   --------->MYB46(3) --------->ANAC46                                  <---------YAB1 ----->ARR14(2)  <---------ZAT2                                   <---------TOE2(3) --->LBD16  ------>ZmHOX2a(1)                                   <---------AHL20(2) --LBD16--------->ARR14(2)  --------->At5g28300                --------->AHL20(2)             <------ ------ARR14(2)  --------->ZAT2           --------->YAB1      <----------DOF2     --------->RAP2.6(3)   ttccatccactatcctcgcagcacacccgaggtaaatgtttccatcatacataaactagatgtgatttaatgtgataataacatttcggcaaacctcttt  25547800  Previous    Next  AGI:  At5g63800.1    Description:  BGAL6/MUM2 (MUCILAGE-MODIFIED 2); beta-galactosidase. Identical to Beta-galactosidase 6 precursor (BGAL6) [Arabidopsis Thaliana] (GB:Q9FFN4;GB:Q0WMN2;GB:Q9SCV6); similar to BGAL11 (beta-galactosidase 11), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G35010.1); similar to BGAL16 (BETA-GALACTOSIDASE 16), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT1G77410.1); similar to BGAL13 (beta-galactosidase 13), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G16730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61895.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71666.1); similar to hypothetical protein [V Range:  from: 25547281    to: 25553075    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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