Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            ------->TEIL                                         <-----------GT1                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                          --------->MYB52(2)                               <---------GLK1(1)                        <---------MYB52(1)                               --------->GLK1(1)                       <<<<<<<<<<AtWER                              <---------ARR14(2)                 --------->ANAC58        --------->ARR11(3)    <---------ARR14(3)                 --------->ANAC58                 ---        <---------ARR11(3)    --------->ARR14(3)                 <---------ANAC55(2)              ---    <---------ICU4            --------->ARR14(2)                 --------->ANAC55(2) --------->YAB1--   <---------YAB1             <---------ARR11(3)                <---------------AtSPL3            --- --------->YAB1               --------->ARR11(3)    --------->REM1(1) <---------ZAT6<---------ATHB12-   tgatcatcaataccttgtttccttcaatgtaagatctccaaatgtacctctcgtacatctcttgatcacgtactgttagtttctcaatcgtgtctggtcc  25526500       <---------ETT(2)      ========================HOX2a_HOX2a                                                --------->AHL20(1)      <------ZmHOX2a(2)                                                                  --------->ARR11(3)     --------->ARR14(2)                                                                  <---------AHL20(1)     <---------ARR14(2)                            <---------ALFIN1                      <---------ARR11(3) --------->LBD16                                <-----------GT1             --------->ARR14(1) ----->P                                      <-----------GT1              --------->ARR14(2) --->MYB83  --------->GLK1(2)         <---------ANAC46                     <---------GLK1(2) ------->MYB46(3)      <------ZmHOX2a(1)   <---------GLK1(2)               <---------ARR11(3) --->MYB46(1)       <---------ICU4 <---------TOE2(3)                       <---------ARR14(2) ------>GAMYB --------->YAB1    --------->GLK1(2)<---------------AGL15     --------->ARR11(3)   aaccgcagatcgacaatcttgatcaggacaagagattgtggtttggattttctccacatagtagaaattcttctcaagatactctctccaatattttgag  25526600                                        --------->YAB1                                        <-----------GT1                                     <---------ICU4                                    <---------YAB1                                    --------->ICU4                                  --------->YAB1                                  <---------ICU4                      --------->ANAC58   --------->GLK1(2)                                 <---------ATHB12                     --------->ANAC58   --------->ARR14(2)                              <---------AHL20(2)                      --------->ANAC46   <---------ARR14(2)              ---------->DOF2--------->AHL20(2)            --------->TOE2(3)             ------->TEIL   tcgaacttgtgagaacaaaagggcatggagattaaatcattatcaccatcaaactcataaacatcagtctccaagctaatctcgctagatgaatctggac  25526700                                      <--------ATHB1                                      --------->ATHB51                                      <---------ICU4                                      --------->YAB1                --------->GLK1(1)     --------->AHL20(2)            <---------WOX13(1)       <---------ATHB12         <---------YAB1              <---------ATHB51                                            <---       <---------ICU4          --------->WOX13(1)                         --------->ANAC46      <----       --------->YAB1   --------->TOE1(3)                   ---------->DOF2                    ------      <------ZmHOX2a(2) --------->TOE2(3)                --------->TOE2(3)--------->ANAC58   --------   ------>ZmHOX2a(2)   ----------->RAV1(2)            <-----------GT1     --------->ANAC58 <---------   tgggatcgatcatgactgatttcaaacctgaatccatcaataatttctccttgttttcacctaaacgctctgaaacacgaagcgagtcccatcggagata  25526800     <---------SPL7   <---------------AtSPL3                           <---------WOX13(1) ------ANAC55(2)                                  --------->ATHB12          --------->At5g28300 ---TEIL                                       --------->GLK1(1)           ----------->GT1 --->CCA1(2)                           <-----------HVH21              <----------DOF2 ->GLK1(1)<-----------HVH21          --------->ARR11(3)              <---------ICU4 ------------WRI1                    <---------ARR11(3)  ------>ZmHOX2a(2)<---------TOE2(3)   cataagaagtacggtcgcatcggagtttgatatgaagaagatgtcagagatttcattgatctgtttcttcatctttacggtaatttcatttctcgttaga  25526900                       --------->ANAC58                       --------->ANAC58                      --------->SPL7                    <---------SPL7                  --------------->AtSPL8               --------->SPL7                                          ----------->GT1          ----------------------->TaNAC69(2)                   <----------ID1          --------->ARR11(3)        <---------GLK1(1)                                    ---------->DOF2       ---------->DOF2        --------->GLK1(1)                  <----------ID1 --------->YAB1   --------->AHL20(2)   -----   acagagtagggtctccgtccatcgtactccattgttttcttgaaaatgacaaaacaaaaatcagaaagacaaatcgataaattagtaaagagctagagaa  25527000                                     <---------ANAC58                                     <---------ANAC58                          <---------ANAC58      ------------------------>ANAC81     -------->HAHB4                          <---------ANAC58----------->RAV1(1)                       --------->YAB1                       <---------TOE2(3)  ------>NtERF2                             <---------ICU4        ---------->DOF2<---------TOE1(3) --------->ANAC46             --------->ALFIN1 ------>GT1       <---------ZAT6     <---------ANAC46    <------------CBF          --------->ICU4   gataaacttgtaaagaaatagggttaaggcttactagtagcttgcgccagaaacaacaagattgaatcgaaggtggagatagctaattatcgtctagggt  25527100                                                      <---------YAB1                                                    -------->ATHB1                                                    --------->YAB1                                 <---------GLK1(1)  <---------ICU4                                 --------->GLK1(1) --------->AHL20(2)                                --------->ARR14(2) <---------AHL20(2)                  ---------->DOF2                             <---------ANAC46      --------->ICU4            --------->ATHB12                   ------->GAMYB<---------ARR14(2) <---------YAB1           <---------YAB1       >>>>                --------->MYB52(1)       --------->ANAC58                   --------->ICU4 --------->ARR11(3)        <-----------GT1     <---------LBD16        --------->AHL20(1)  --------->ANAC55(2) <---------GLK1(2)      <-----------GT1    <------------CBF--------->ANAC58<---------YAB1<---------ANAC55(2) <---------ARR11(3)   ttgccatttttcactctccaacgggggaattggggatatcgtcaagctacaaaattattatgttttcgctattacataatgtttgataaaaaagattttt  25527200                                                                                             <-------                            --------->AHL20(2)                                             ----------                        <----------DOF2                        <---------AHL20(2)      <---------AHL20(1)                     --------->ARR11(3)                        --------->AHL20(1)      --------->AHL20(1)                  --------->YAB1                           <---------AHL20(2)          <---------AHL20(2)                 <---------YAB1                           <---------AHL20(2)          --------->AHL20(2)               --------->YAB1                          <---------ICU4                 --------->YAB1               <---------ICU4     <---------TOE2(3) <---------ANAC55(2)              <---------YAB1      --------->DAG2 <---------ARR11(3)             --------->ANAC55(2)            --------->YAB1 ---     ---------->DOF2--------->GLK1(1)      <---------TOE2(3)   --------->AHL20(2) <---------AHL20(2) --------->At4g35610<---------GLK1(1)     <-----------GT1 --------->AHL20(2)      --------->AHL20(2) >>>>>WRKY18--------->YAB1  <---------AHL20(2)    <-----------GT1            <---------ARR11(3)   <--   gacagcataaagtttgataatgatatctttttaattaagaaattttacgttgttacataattaaataaaatatgaccaaaatcatttattatattgttat  25527300                                                                                 --------->ANAC46                                               <---------AHL20(2)       --------->AHL20(2)                                               <---------ICU4           <---------AHL20(1)          -           <---------AHL20(1)                  --------->AHL20(2)       <---------AHL20(2)          <           --------->AHL20(1)              <---------AHL20(2)           --------->AHL20(1)         --           --------->ARR11(3)              --------->AHL20(2)          <---------AHL20(2)          <-         --------->AHL20(1)              --------->ANAC55(2)           --------->AHL20(2)          <- --------->ZAT6                          --------->TOE2(3)         <---------AHL20(2)            ---- --YAB1  <---------AHL20(1)        --------->AHL20(2)      ----------->GT1 --------->AHL20(2)<------- ->GT1  --------->AHL20(2)       --------->AHL20(2)<-----------GT1 --------->AHL20(2)        -------- ------>YAB1               <---------AHL20(2)  --------->ATHB51  --------->YAB1<-----------GT1  ----- -------ICU4               --------->AHL20(2) --------->ICU4     --------->TOE2(3)          <--------   tcatcactaaatatatattggagcaaaatttaaatttttatatacttaattatttactatttagtaatattaattaaatttatacgatatgtcaataatc  25527400  Previous    Next  AGI:  At5g63730.1    Description:  IBR domain-containing protein. similar to IBR domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63750.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83309.1); similar to OJ990528_30.1 [Oryza sativa (japonica cultivar-group)] (GB:CAE02043.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44993.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) Range:  from: 25525326    to: 25526932    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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