Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                              <------ZmHOX2a(2)                                 <-------MYC3                                                --------                              <---------ALFIN1                                               <-------                  --------->ANAC58                                                           --------            <---------ZAT6   <------NtERF2                                                   --------        --------->LBD16      --------->LBD16                                                 <-------       <---------ANAC55(2)   <---------At4g35610                                      --------->ATHB12       <---------ANAC46<---------ALFIN1                                              --------->ICU4       --------->ANAC55(2) <---------ZAT18         <-----------GT1         <----------DOF2   <-------      <---------LBD16----------->RAV1(1)        <---------DAG2             <---------DAG2   <-------- ---At4g35610     --------->ANAC58              <----------DOF2         <-----------GT1--------->ARR11(1) -->At4g35610   ---------->DOF2  ------->MYC3<---------ALFIN1--------->LBD16         <---------YAB1   cccattgtcccgtagtgagaaagcaccagtccgcacatgactagccctcactttaaccattcccccataagaaattactttttgagaatgattcggatct  25502500                                                   <---------ANAC58                                                   <---------ANAC58                                                  <---------At4g35610                                              <----------DOF2      <---------ANAC46                       <---------ANAC58 >ZmHOX2a(2)                                 <---------ANAC58                ------>NtERF2 ->ARR11(3)                            --------->GLK1(2)                    --------->DEAR3(1)    <-- --ARR14(2)                            --------->ARR11(3)                  --------->DEAR3(2)    ---- ->AGP1                                <---------ARR11(3)            --------->ATHB12            <--- ->ARR14(2)                           --------->RVE1(1)              --------->ATHB51            <--- ----ARR10                            --------->CCA1(1)             <---------YAB1          <-------- --AGP1                       <xxxxxxxxxxxxxxxxsmallRNA(i)    <-----------GT1--------->ORA47(1)  ---- -CCA1(2)         <----------DOF2   --------->AHL20(2)        <---------AHL20(2)           --------->TOE2(3)   agttcatggcctattagtaactttcaaaaaaaaaaaaaaaaaatcttgctttagcttatgttattaacttattattggccgaccattgtccctcgttaat  25502600                                      ------------>CBF                                      <---------ZAT18                                   <---------ANAC58              <----------DOF2      <---------ANAC58              <---------DAG2       <---------ANAC46          --------->ZAT18         <---------AtMYB61          <---------ZAT14         --------->ALFIN1          <---------ZAT18        <---------ZAT14 -------AHL20(2)                --------->ALFIN1                         <---------WRKY18(1) ----->AHL20(1)               <---------ANAC58                  --------->ANAC46             -------- ------AHL20(1)               <---------ANAC46                  <---------ALFIN1   --------->At4g35610 ------AHL20(2)               <---------ANAC58          <----------DOF2 --------->WRKY38(1)  <------- -MYB52(1)--------->ZAT14 <------------CBF              <---------DAG2  --------->WRKY12     <------- ----->AHL20(2)         <---------AHL20(2)           <-----------GT1  --------->TOE2(3)      --------   ttaatattcgactgcactttttttgttttattgtgtgtggtgcaattcatcgtttatactttatccacacatccttgaccatagcatctaactaataaaa  25502700                                                                                           ----------                                                                                           <---------                                                                                          <---------PCF2                                                                                          --------->TCP16(1)                                                    ----------->GT1                       --------->PCF5                                                  <------------CBF                        -----------                                                <---------AHL20(1)                       <---------TCP16(2)                                                --------->AHL20(1)                       ----------->TCP11(1)                                                --------->AHL20(2)                   <-----------RAV1(1)                                                <---------AHL20(2)             --------->ZAT14                                               --------->AHL20(2)              <---------ZAT18                                          --------->YAB1                       --------->ZAT18 ->AHL20(1)                 <----------DOF2  --------->YAB1                    <---------ZAT14 --AHL20(1)        --------->TOE2(3)     --------->ZAT6                     <---------ANAC58 --AHL20(2)       <---------YAB1     --------->AHL20(2)                     <---------ANAC58    ----- ->AHL20(2) <---------ARR11(3)       <---------AHL20(2)                     <---------ANAC46<------NtERF2   tacgatggagactagctcttaccatagcatctttttttttttaatactaataaattgtttaaaactcgatgtttagttgagtacactatgtggccccaaa  25502800                                                                                                    -                                                                                                  ---                  --------->REM1(1)                                                               <--                  <---------ALFIN1                                                            -------         --------->ANAC46                                                                    <-------         --------->ANAC58                                                                    --------         --------->ANAC58                                                                   ---------       --------->MYB52(1)                                                                   ---------    --------->TOE2(3)                                                 <---------ANAC58  --------->ANAC46    --------->TOE1(3)    ------->TEIL                                 --------->ANAC55(2)------------ ----->AGL15     -------->P                                           <---------ANAC58  --------->ANAC58 ------AGL15     ------>MYB83 ----------->TBP                   <---------ALFIN1    <-----------GT1<- ------>AGL1     ------>MYB46(1)----------->TBP        --------->ARR11(3)   <-----------GT1--------->WOX13(1) ----->DOF2    --------->AtMYB61<---------AHL20(2)<---------REM1(1)  <---------TOE2(3)  --------->ANAC58   aagaaaccctaacgaaacctacacttgaatctatatatatggagtcatggagaagtagctcttgctccacttacgtttttagcatttaacaagcaatcaa  25502900      <------ZmHOX2a(1) -------->ATHB12 ------>ARR11(3) -------ARR11(3) -->YAB1 --ATHB12 ---->CBF  ----------->TBP                     <---------ANAC58 >ANAC58 --------->AHL20(2)                    <---------ANAC58 >ANAC58 <-----------TBP                 <---------YAB1 >CBF<---------YAB1             <---------At4g35610      ------>ZmHOX2a(1)  <----------DOF2       <-- --------YAB1                   --------->At4g35610   ---------->ID1<---------ANAC55(2)  <---------AHL20(2)   tatcattaggattatatatggagaacaagtttttcgctgcattcttcttgcttcttgtcctcttctcatctcgtaagtcttttccttctatatatatgca  25503000                                                                        ------>ZmHOX2a(2)                                                                      <---------ARR11(3)                                                                  <---------ANAC46                                                                  <---------ANAC55(1)                                                                  <---------ANAC58                                   --------->AHL20(2)             <---------bZIP60(1)                                   <---------AHL20(2)             <---------ANAC58                               --------->AHL20(2)                 <---------O2                              --------->AHL20(1)                  --------->ANAC55(2)                              <---------AHL20(1)                  <---------ANAC55(2)                             --------->AHL20(2)                   --------->bZIP60(1)                          --------->YAB1                        <-----------GT1                   ---                  <---------WOX13(1) <---------AHL20(2)       <-----------HVH21                   <--                --------->ATHB12 --------->AHL20(2)          <---------ZAT6                       <--      <---------WRKY18(1)--------->AHL20(2)            --------->bZIP60(1)               --------->ALFIN1 -------AtMYB61<---------AHL20(2)<---------AHL20(2)    <---------bZIP60(1)               <-----------RAV1(1)   ttggtccatgaccatatttgattgacaataaatatatatatatatgatatatatgtgaagtcagtgttacgtgatctatctccattcttatgtgttgcat  25503100                         --------->ATHB12                        <------ZmHOX2a(2)                        ==========================HOX2a_HOX2a                               ---------                        <---------YAB1                           --------->AtMYB61          ------->GAMYB                       <---------ARR11(3)              ---------->DOF2                      ---------                       --------->ARR11(3)             --------->YAB1                      ------>MYB46(1)            <---------AHL20(2)    ----------->HVH21  <---------ATHB12                     ------>MYB83           --------->AHL20(2)     --------->ALFIN1 --------->WOX13(1)      <-------TEIL   -------->P           <---------AHL20(2) <---------ANAC46 --------->AtLEC2  <---------ALFIN1  --------->SPL7 ------>AHL20(2)      --------->GLK1(1)        --------->ANAC58 --------->MYB46(3) ------->TEIL -------AHL20(2)      <---------GLK1(1)        --------->ANAC58------>NtERF2   <-------MYC3--------->MYB46(3) -------AHL20(1)    <------ZmHOX2a(1)      <------ZmHOX2a(1) --------->MYB46(3)------->MYC3<---------MYB55(2)   tttatttgtgtaattaaatagaggagatcattgggggtgaaggaaggacatgccaatcaaagagccaccacttcaaatacatgtgtacgtccaaccacaa  25503200                                                                             <----------DOF2                                         ------>NtERF2                      <---------DAG2                                      <---------At4g35610                 --------->LBD16                                      <---------ATERF1(1)                 ------>NtERF2                                      --------->At4g35610                --------->ANAC46                                     <---------DEAR3(1)                  --------->ANAC58                                     <---------MYB46(3)                  ------->GAMYB                         <----------TaMYB80                             --------->DEAR3(1)                         --------->HSFB2a(1)                            <---------MYB55(2)                         <---------HSFB2a(1)                          ------->TEIL                        --------->ARR14(2)                           <---------ALFIN1               ----------->HVH21  <---------MYB46(3)                <---------ZAT18              <---------SPL7     <---------AtMYB61                  --------->ZAT18              <---------RAP2.6(3)--------->ALFIN1           <---------MYB52(1)             --------->ANAC55(2)<---------MYB52(1)         <-------GAMYB--------->MYB46(3)             <---------ANAC58  --------->LBD16  <---------ANAC58    --------->ZAT14            <----- >TOE2(3)    <---------ANAC58<---------LBD16    <---------ANAC58    <---------ZAT14 <---------STY1(2) >AtMYB61   ----------------->AGL1--------->ABI4(2)    --------->DEAR3(1)--------->ANAC58 <---------AHL20(2)   ctgtgccatagtttgccgtaacgagggattttccggtggtcgctgccatggcttccatcgccgttgctactgcacccgcctttgctaactagtttatttt  25503300                         <----------DOF2                   <----------DOF2                                                         <------MYB46(1)                   <---------DAG2                                                          <---------ANAC46                 ------->TEIL                                                              <------MYB83             <---------------AtSPL8               --------->DAG2                           ----------             --------------->AtSPL3              ---------->DOF2                          --------->MYB59             --------------->AtSPL8   <---------YAB1                                      <---------MYB46(3)          --------->AHL20(2)     <---------AHL20(2)   <-------TEIL          ----------->HVH21   ----- ------GT1<---------AHL20(2) <----------DOF2  --------->YAB1     <----------DOF2      <-----------RAV1(1)   ccattaatccatttaaatgtactttttctttctttttattttgaatactaataaagttcatcttcttctttttctcgtttgacatctattgttgggtaaa  25503400  Previous    Next  AGI:  At5g63660.1    Description:  LCR74/PDF2.5 (Low-molecular-weight cysteine-rich 74). Identical to Putative low-molecular-weight cysteine-rich protein LCR74 precursor (LCR74) [Arabidopsis Thaliana] (GB:Q9FFP8;GB:P82783); similar to LCR68/PDF2.3 (Low-molecular-weight cysteine-rich 68), protease inhibitor [Arabidopsis thaliana] (TAIR:AT2G02130.1); similar to seed-specific low molecular weight sulfur-rich protein [Glycine max] (GB:CAA79164.1); contains InterPro domain Gamma Purothionin; (InterPro:IPR008177); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 25502918    to: 25503288    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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