Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------O2                                       ----------                                        --------->O2                                     --------->ANAC58                                       ----------->STF1                                  --------->ANAC58                                     ----------->HVH21       --------->YAB1              --------->ANAC46              ---------->DOF2  --------->ANAC46   <---------CCA1(2)            --------->REM1(1)   tgaacaaattcagacacaaagactccaaattatcagcaattgacgtcttatcaaatctcatattcaaaatagaattcatctacatcgagacacgaaagct  25482700                                                      <---------ZAT2                                                      --------->ZAT2                                                     --------->ANAC58                                                     ------>MYB83                                <---------ATHB12     --------->ANAC58                              --------->WOX13(1)     ------>MYB46(1)                      --------->DAG2    --------->At4g35610   <----------DOF2   ---------->DOF2    <---------At4g35610---------->DOF2   <------ZmHOX2a(1) >DOF2      ---------->DOF2 <------ZmHOX2a(2)   <-----------GT1     <---------ATHB12        ---------   cgagactttacttcaaaagatggaaaagggatcaatcaattcagcagaaattaccaagctccaaagaccaataaccagaggaaaaccctacaaattcaat  25482800                        <---------ATHB12                      ------>MYB83                      ------>MYB46(1)                                               ------>ZmHOX2a(2)             <-----------------------TaNAC69(2)                                    <------ZmHOX2a(2)            --------->ZAT18                                                       --------->ARR11(3)            <---------ZAT18         --------->AHL20(2)                            <---------ARR11(3)        <---------DEAR3(1)          <---------AHL20(1)                  ------>NtERF2   --------->AGP1   --------->TOE2(3)                      --------->AHL20(2)     <---------ARR14(2) --------->LBD16    <---------MYB59 <---------AHL20(2)     <---------AHL20(2)     --------->ARR14(2) >AHL20(2)  ------>NtERF2 ---------->DOF2          <----------DOF2   --------->HSFB2a(2)   <---------   acccagagctacggtgccctaacctaatcaaagaccaaaaaatttcgataccactttcaaattaaaaacttcgaggccttatacgatctgtttttacatt  25482900                                            <-----------------AGL1                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                       <---------At4g35610                                       --------->At4g35610                                      <---------AGP1                                      <---------ARR14(2)                                      --------->ARR14(2)                                      <---------ARR11(3)                                      --------->GLK1(2)                                      --------->ARR11(3)                                      <-----------ARR10                                 --------->MYB52(1)     <-----------HVH21                              --------->ANAC55(1)       <-------GAMYB                             ---                              --------->ANAC55(2)      <---------DEAR3(2)                    <-------                              --------->ANAC58        <---------RAP2.6(2)                 --------->HSFB2a(2)                              --------->ANAC46  --------->ARR14(2)                   <---------ZAT2                              <---------ANAC55(2)  --------->DAG2               <---------ZAT2   <---                             <-------TEIL----------->HVH21                      --------->ZAT2-------                 =============================HOX2a_HOX2a   <-------GAMYB       --------->At4g35610                 ==============================HOX2a_HOX2a  --------->At4g35610 <---------At4g35610                 <------ZmHOX2a(1)   <------ZmHOX2a(1)<---------DREB2C(2)      <-----------ARR10-----                ----------->GT1  ---------->DOF2<---------ARR14(2)            <------ZmHOX2a(1) -----             ===============================HOX2a_HOX2a<---------MYB46(3)   --------->ALFIN1 -------- --GT1       <------ZmHOX2a(2)--------->ANAC58--------->LBD16      --------->ATHB12  --------->ZAT2   tctcaaaaatcgacgatcaggaaaatagaaatacgtaaaggatctgaccggataaggcggtcggatgaatgatgggaagaggagctgagcttggagaacc  25483000                                                --------->ANAC55(2)                                                <---------ANAC55(2)                                                --------->ANAC58                                               <---------LBD16                                              --------->MYB52(1)                                             ----------->HVH21                                             --------->TGA2(2)                                            <-----------HVH21                                            <-----------TGA1                                           --------->ANAC46                                           <---------bZIP60(1)                                           --------->TGA2(1)                                       <-                                           <---------O2                                           ---                                           ===============================================MYC_MYB ---                                           --------->TGA1a                                       ----                                           --------->O2                                          ----                                           <---------TGA1a                                       ----                                           --------->ANAC58                                      ----                                           <---------TGA2(1)                                    -----                                           <---------ANAC55(2)                                  -----                                           --------->ANAC58                          <---------ANAC58                                           --------->ANAC55(2)                       <---------bZIP60(2)                                     <-----------HVH21                       ------------>MYB.PH3(1)                                  <---------LBD16                            --------->MYB52(1) <----                                --------->GLK1(2)                        --------->LBD16        <----         <------ZmHOX2a(1)     --------->KAN4(2)--------->ANAC55(1)     --------->HSFC1(1)   <-------    --------->ALFIN1          --------->HSFB2a(1)                       --------->HSFB2a(2)  -------- ------>TOE1(1)               <---------HSFC1(2)--------->ANAC58        <---------HSFB2a(2) --------- --ARR14(2)                   <---------HSFB2a(1)                       <---------HSFC1(1)  --------- ------LBD16                  --------->HSFC1(2)--------->ANAC46       <---------LBD16      --------- -->GLK1(2)               ----------->GT1  --------->bZIP60(2)     <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)< ---->TOE1(2)           <----------ID1     --------->bZIP60(1)   <---------ANAC58    <---------ANAC58 ---->TOE2(2)       ---------->DOF2 --------->LBD16              <---------ANAC58 ----------->TGA1--- ->ARR14(2)         =================================bZIP_DOF    <---------ANAC46 ----------->HVH21--   tcggagatggaggagagtagacaaaagcgagaaaattccggtgagacgtcacggaagggagaagattgcgttttccagaaaacggtgacgttccaagcag  25483100  <---------At4g35610  --------->At4g35610 --------ATERF1(1) ------>DEAR3(1) ---->GAMYB ----->MYB46(3) ----->RAP2.3(1) ----->ATERF1(1) ----->DEAR3(2) ---->ZAT2                                                          ----------->GT1 ---->At4g35610                                                   <---------YAB1 -----At4g35610                                                 --------->ATHB12 -----ATERF1(1)                    <-----------GT1              <---------AHL20(2) --ZAT2                       <---------AHL20(2)               --------->AHL20(2) ->ZAT2                       --------->AHL20(2)               <---------AHL20(2) >ANAC58                     <---------AHL20(1)             --------->AHL20(2) >ANAC46                     <---------AHL20(2)             <---------AHL20(2)    <---------YAB1 >ANAC58   ----------->GT1   --------->AHL20(2)            --------->AHL20(2)   <---------AHL20(2)  < ------NtERF2          *TSS --------->ICU4           --------->ANAC58           --------->AHL20(2)<-- -------->HVH21        ----------->GT1               --------->ANAC58          --------->AHL20(2) --- ---->NtERF2        <---------GLK1(2)                --------->ANAC46      <-------TEIL           ---   ccgacgctgagaatggaaactagatttgtaatttttttagccacttgctccaactacgctatttatttattagtaaattcatttatttttgtgttcaaat  25483200                                                              --------->ATHB12               --------                                                             <---------ATHB12                <-------                                                             --------->ICU4                  --------                                                             <---------YAB1                  <-------          --------->AHL20(2)                                <---------TOE2(3)               ---------          <---------AHL20(2)                              <---------AHL20(2)           ----------->GT1 ---------AHL20(2)                                     <---------ARR11(3)          ---------->DOF2 -------ANAC55(2)         --------->TOE2(3)            --------->ARR11(3)        --------->YAB1 ------>ANAC55(2)       <-------TEIL               ---------->DOF2           <---------AHL20(2) -------->GT1 <---------ATHB12          <---------CCA1(1)--------->AHL20(2) --------->AHL20(2)   aagtaatttcatttaaatcatcgatatacattagtagattggatatttctcatcaaagatttaatgatttatagataattttatcaaaagagaaataaat  25483300                           <---------YAB1                          --------->AHL20(2)                                         --------->ZAT14                          --------->YAB1                                             <---------ZAT14       --------->AHL20(2) <---------AHL20(2)                              <---------AHL20(1) ->AHL20(2)             <---------YAB1                                    --------->AHL20(1) --AHL20(1)          <---------MYB52(1)   ----------->GT1      --------->ANAC58  --------->ZAT6 ->AHL20(1)         <-------GAMYB      ----------->GT1         --------->ANAC58<-----------GT1 --AHL20(2)     <-----------HVH21    ---------->DOF2  ---------->DOF2--------->AHL20(2)             < >AHL20(2) <---------AHL20(2)   --------->TOE2(3)----------->GT1     <---------AHL20(2)----------->GT1   tgtgtttttttatatatatgtcagttattaatattcttagaaagtagaaaattgtgaaaagagggaagaaattaaaaatattaacagtatagaaaaacaa  25483400                                 --------->AHL20(2)              ----------->GT1    <---------AHL20(2)                      <---------At5g28300         --------->ANAC58       <---------YAB1                   <-----------GT1         --------->ANAC58     --------->YAB1                     ---------->ID1       ---------->DOF2        --------->AHL20(2)   <---------ZAT14      <-----------GT1 <-----------RAV1(1)   --------->At5g28300         --------->ZAT14  <----------DOF2 ---------TOE2(3)     ----------->GT1       ----------->GT1     <-----------GT1   taaatgttggaaagaaatgaaaaacagtaaaattataaattttgtccagttactacagtttttttttttccttttcactgtctaaacaaacacaaatatc  25483500                                                                      --------->WOX13(1)                                                                    <---------ATHB12         --------->ARR11(3)                                 ----------->HVH21             --------->DAG2     <---------ICU4             <---------MYB52(2)        --------->ALFIN1              ---------->DOF2   <---------TOE2(3)<---------YAB1                    <-----------RAV1(2)             --------->YAB1<   agattaacaatgaccttgtctgaagattgtagcaactaaaaatagacctcagtgaaacaggtgtgaagcagtcattcacaaaccagaatcaaaaggctat  25483600  Previous    Next  AGI:  At5g63610.1    Description:  HEN3 (HUA ENHANCER 3); kinase. Identical to Cyclin-dependent kinase E-1 (CDKE-1) [Arabidopsis Thaliana] (GB:Q84TI6;GB:Q70Z09;GB:Q9FFQ3); similar to CDC2/CDC2A/CDC2AAT/CDK2/CDKA1/CDKA,1 (CELL DIVISION CONTROL 2), cyclin-dependent protein kinase/ kinase/ protein binding / protein kinase [Arabidopsis thaliana] (TAIR:AT3G48750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71656.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/thr Range:  from: 25480663    to: 25483123    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g63620.1    Description:  oxidoreductase, zinc-binding dehydrogenase family protein. similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G64710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71612.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085) Range:  from: 25483354    to: 25485659    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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