Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ZAT2                                                     <---------AHL20(2)                  ----------->RAV1(2)                                        <---------ARR11(3)                  --------->ZAT2                             ---------->DOF2 <---------GLK1(2)        --------->ZAT2                     <---------At4g35610               --------->ARR14(2)        <---------ZAT2       <---------ANAC55(2)    <---------ARR11(3)       --------->ARR11(3)       --------->AGP1        --------->ANAC55(2)    --------->ARR11(3)       <---------ARR14(2)  <-----------HVH21--------->TOE2(2)       --------->At4g35610      --------->YAB1--------->TOE2(3) ---->RAV1(1)   <---------ALFIN1  ----------->GT1   <-----------ARR10 --------->At4g35610   attttgtcagagctaggcacacctgcgtcttaagtaatgtgatttagatgacattatcttcccaaaagaatcatctccagattttcttaaattgaacaaa  25423100               --------->AHL20(1)               <---------AHL20(1)               --------->AHL20(2)               <---------AHL20(2)              <---------AHL20(2)              --------->AHL20(2) <---------At4g35610              --------->YAB1     --------->At4g35610           --------->YAB1        <---------ZAT2          --------->AHL20(2)     --------->ZAT2                                       <---------ARR14(2)          --------->ICU4------->TEIL                                                  --------->ARR14(2)        --------->TOE2(3)   <-----------GT1                                     --------->GLK1(2)     --------->ANAC58<---------ANAC55(2)     <---------YAB1                     --------->ARR14(2) --     --------->ANAC58<---------YAB1       <---------YAB1                   ------->GAMYB           --   ---------->DOF2<---------AHL20(2)    <---------At4g35610               --------->ANAC46    <------   aacagaaaagcattaattatattatgtatgtaaccagctgtaagatgatttttgtctgtagaactagaagctatcaacgcagaatccaaatcccaaggga  25423200                                     <-------TEIL                                    --------->CCA1(2)                                    --------->ARR14(1)                                   <---------ARR14(2)                                   --------->ARR11(1)                                   <---------GLK1(2)                                 <---------TOE1(3)                     -------->ATHB1                                 <---------TOE2(3)                    --------->ICU4                                 <---------YAB1                   --------->LBD16   --------->ANAC58        <------MYB46(1)                       --------->ANAC46   --------->ANAC58        <------MYB83                         <---------LBD16 ---------->DOF2          --------->MYB59<----------DOF2       --------->MYB52(1) ------->ANAC58           <---------AtMYB61                    -------->P      --------->YAB1 ------->ANAC58    <-----------GT1 --------->ARR14(2)         --------->MYB52(1)       <-------TEIL ----ID1--------->ICU4  <---------MYB52(1)             <---------ANAC55(2) <---------AHL20(2)       <   caagaaagccatgactagttttttcggtttggtttaagattcgctttggcttcaaacacatgactaaccggaattattcaattttgatgttcatgtggtt  25423300                                                         --------->LBD16                                                       <---------LBD16                                              <---------AHL20(2)                                          <---------AHL20(2)                                          --------->AHL20(2)                                 <---------ATHB12    --------->ARR14(2)                                ------>MYB83  --------->AHL20(2)                                ------>MYB46(1)      <---------ARR14(2)                     ---------                              --------->AtMYB61    <---------AHL20(2)                ------>MYB46(1)                   <---------AHL20(2)    <---------AHL20(1)                          ------>MYB83             <---------MYB52(1)--------->WOX13(1) --------->AHL20(2)                --------->MYB52(1)            <-------GAMYB     --------->MYB46(3)  <---------AHL20(2) <-------GAMYB  ----------->RAV1(1)       <<<<<<<<<MYB2    <-----------GT1  <---------AHL20(2)         <-----------RAV1(1)    ---------- ---------YAB1    --------->AHL20(2)     --------->AHL20(2)    <---------At4g35610--------->MYB46(3)   ttcttattggttttcgttgattttatataccaccaatcactaatttttttaattaaatccggtttagatgctgttgtacattgaaccaacagttaaagtg  25423400                                                                ------------>CBF                                                             --------->LBD16                                                            --------->O2                                                            <---------O2                                                            --------->DEAR3(1)                                                            <---------TGA1a                                                            --------->TGA1a                                                            <---------ANAC46                                                           <------NtERF2                                                           --------->ATERF1(1)                                                          ------>NtERF2                                                          --------->ABI4(1)                                                         --------->ANAC46                                                         --------->RAP2.3(3)                                                         --------->RRTF1(3)                                                         --------->RAP2.3(2)                                                         --------->DEAR3(1)                                                         <---------DEAR3(1)                                                        --------->ORA47(2)               <---------AHL20(2)                                                        --------->ERF1              <---------YAB1                                                        --------->RAP2.3(1)       --------->YAB1                                                        --------->DEAR4(2)       <---------YAB1------                  ---------->DOF2                       --------->ATERF1(1)   <---------AHL20(2)               --------->TOE2(3)                       <---------ATERF1(1)    --------->AHL20(2)   --------->MYB52(1)                             <---------ETT(2)            --------->AHL20(1)   ------------>AtMYB77                         <-----------HVH21             <---------AHL20(1)  ----------->HVH21     --------->At4g35610    --------->DEAR3(1)       ----------->GT1<---------YAB1 >DAG2         --------->TOE1(3)  <---------MYB52(1)  ------>ZmHOX2a(2)--------->MYB59<---------AHL20(2) >DOF2     <-----------GT1       <-----------HVH21--------->ETT(2)  --------->ICU4<---------ICU4   agaaatgacggtttcacccttaaagcagcgtagcccgtctggtattccaccgtcgatcgccgccgtggcaattttggtaatttattattattttaaaaac  25423500                                             <---------AHL20(2)                                             --------->AHL20(1)                            *TSS     <---------ETT(1)                           <---------At4g35610--------->ATHB12<----------DOF2                           <---------ZAT2    --------->AHL20(2)                  --------->At4g35610-                           --------->At4g35610<---------AHL20(2)                 <---------At4g35610<                 ---------->DOF2  --------->ARR14(2)        ------->TEIL         --------->CCA1(2)  -   ---------->DOF2         --------->ZAT2    <---------AHL20(1)      >>>>>>>>>TBF1             ------ ------>CBF   --------->AtLEC2    <---------ARR14(2) <---------WOX13(1) >>>>>>>>>TBF1          ------   aatgtgaaagagattaatgcaaagttgagagctgagtttccgacaaatttattggattgacgaactttgaagaagaagaagagagatgccgaagagaacg  25423600                             <---------SPL7                             --------->LBD16                            <---------ANAC46                           <------NtERF2                           <---------LBD16                          ------>NtERF2                          <---------ATERF1(1)                         <---------DEAR3(1)                        --------->ABI4(1)                        <---------ABI4(2)                        <------NtERF2                      --------->ATERF1(1)                      <------NtERF2                     <---------RAP2.3(1)                     <---------ATERF1(1)                     ------>NtERF2                    --------->ANAC58    --------->ANAC55(1) ------>NtERF2    --------->ANAC46--------->ANAC46    --------->ANAC55(2)<---------ATERF1(1)    --------->ANAC58--------->ANAC58    --------->ANAC58<---------DEAR3(1)                  <---------ARR14(2)                          -    <---------ANAC55(2)--------->DEAR3(1)            <---------ANAC46                       --------- -------->ANAC58   --------->SPL7               ------>ZmHOX2a(2)                           <-------- ---------ALFIN1  =====================================HOX2a_HOX2a                      --------->ICU4 -------->ANAC58  <---------ATERF1(1)     --------------------->WRI1                    ------>ZmHOX2a(1) --->ANAC58       <------ZmHOX2a(1)  --------->DEAR3(2) --------->ARR14(2) <---------MYB46(3)      <- --->ANAC58      ----------->HVH21 ------->TEIL--------->GLK1(1)        <-----------RAV1(1)<---------YAB1   acacacacgtactcgagcgaggacgccgcgccggatggacccgactctgatctcttcgtatactactgcaaacactgtggttctcatgtccttatcactg  25423700                                                         <---------ZAT6                            <-                                                  --------->AHL20(2)                   <----------DOF2                            --------->LBD16   <---------ANAC58              <---------ANAC58       -- -------->MYB52(2)   <---------YAB1           ----------->GT1               <---------ANAC58     ---- >ZAT6            <----------DOF2             <---------ANAC46          <---------ANAC58        ----- ---GT1          <---------DAG2               <---------ANAC58          <---------ANAC58        <---- ------TEIL   <-----------GT1            --------->MYB52(2)        <----------DOF2   <----------DOF2-   gttcgtttctccaatttcaccttttgattccgagtttggggtttagttgcgttaaattagagtgaaacccttttacttgcgagattgctctttggtttcc  25423800        <---------WOX13(1)      --------->ATHB12 <-------TEIL        <---------WOX13(1) --------ARR14(2)  --------->ATHB12 ------->ARR14(2) <---------YAB1 ----->LBD16    --------->YAB1                                                                      < ---->HSFB2a(2) <---------ICU4                <----------DOF2                          <---------MYB46(3) -----HSFB2a(2)--------->ICU4            <---------WOX13(1)                           <---------ANAC46 -------->CCA1(2) --------->ICU4  <---------ATHB12                                 --------->ALFIN1 <   agatacattgattgggaattatgattgaaagtttcaatctttgatttactttgaacatcaggtcatagtagtttatagtttttaagtggtggataacttc  25423900                                                      --------->ANAC55(2)                                                    <-----------GT1                                               <---------GLK1(2)                            <---------DAG2     <---------ARR11(3)                     ------->GAMYB      --------->ANAC58          <---------TOE2(3) <----------DOF2    --------->ARR11(3) <----------DOF2    --------->MYB46(3)  --------->AtLEC2               --------->GLK1(2) ---------ANAC58    <---------MYB52(2)  --------->ANAC58 --------->ATHB12 ---------ANAC58 <----------ID1  --------->MYB59<---------RVE1(1)     <---------GLK1(2)          ----   ttgctttgaatttagattaacaacaaactactttttaggtccaagcacagatttttacatgatttcgatttagattcttggggttttgttactctggtaa  25424000  Previous    Next  AGI:  At5g63420.1    Description:  EMB2746 (EMBRYO DEFECTIVE 2746); catalytic. similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT2G38250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68277.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81787.1); similar to hypothetical protein OsI_007422 [Oryza sativa (indica cultivar-group)] (GB:EAY86189.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279) Range:  from: 25417612    to: 25423194    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g63440.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN75279.1); contains InterPro domain Protein of unknown function DUF167 (InterPro:IPR003746) Range:  from: 25423528    to: 25425649    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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