Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------AHL20(2)    --------->AHL20(2)                                                    <---------YAB1    --------->AHL20(1)                                           <---------ARR14(2)    <---------AHL20(2)                                     <---------GLK1(1)                      <--    <---------AHL20(1)                              --------->ATHB12      --------->ICU4      <------ --------GT1                   <-------TEIL   --------->YAB1     --------->ARR11(3)     --------->ZAT6 --RVE1(1)                 <---------TOE1(2)------->TEIL   --------->GLK1(1)           --------->ZAT18 --CCA1(1)      --------->AtLEC2     <---------YAB1<-------TEIL  <---------GLK1(2)     <---------ZAT18   ttctaatttattcagacaatgcaaaattgcaggttcagtatcaatgtatcatattcatgggatttcagattttgtgatgactattttagaacactacttt  25417200                                     <---------At4g35610                                     --------->At4g35610                                 --------->TOE2(3)                               <-----------ARR10                               <---------ARR11(3)                               --------->GLK1(2)                               --------->ARR11(3)                     <---------TOE2(3)                         <---------ANAC58    --------->At4g35610<------ZmHOX2a(1)    <---------DAG2     <---------ANAC58 -------YAB1    <---------YAB1--------->RVE1(1)          <-----------GT1 ----DOF2  ----------->GT1 --------->YAB1   <----------DOF2   <-------TEIL---------->DOF2   <--------   gtgattatctgaaatgttatatttaggaataaaaatcttagctaaacttttttttttttttacattcgtgctatttgaaagaaaaaaaaaacttatagtt  25417300                                 <---------At4g35610                               <---------WRKY18(1)                              --------->WRKY12                              --------->WRKY38(1)                          ------->TEIL             <---------YAB1     <---------AHL20(2) <---------YAB1       <---------TOE1(2)<---------ICU4             --------->AHL20(2) -YAB1               ------>ZmHOX2a(1) --------->YAB1           --------->AHL20(2)               ----   gctatgaatgagaaaccatcttcctatgtatgttgacctgataatcacttgctatgaatgagacatttttatataaaaaaaccgctatgaacgagacatt  25417400                   --------->MYB52(1)                  --------->ZAT14                  <---------ZAT14                --------->At4g35610           --------->WRKY38(1)         <---------At5g28300           ----------->HVH21 --------->AHL20(2)           --------->WRKY12 --------->AHL20(2)                                         <---------MYB52(1)   --------->AtMYB61        <---------AHL20(2)----------->GT1           --------->MYB52(1)       <--- ----->AHL20(2) <---------At4g35610   <-----------GT1              <----------ID1     <----------DOF2   taaaaccatcacgttgacagcaaactgcatataaattaagttaccgaatggtttaatgggcctagtaatgggccaaacagtctttctcctttatttcaga  25417500                                            <-----------GT1                                            --------->ARR14(2)                                            <---------ARR14(2)                                            --------->MYB52(1)                                        <------ZmHOX2a(1)                                      <---------TOE2(3)                                   <---------MYB52(1)                                  <-------GAMYB                                 <---------ANAC46                               <-----------------AG                               <-----------------AGL1     ------------>CBF                             <-----------HVH21   <---------MYB52(1)                      --------->ATERF1(1)         --------->ZAT18    ----------->HVH21--------->MYB52(1)             <------------CBF       <---------ZAT18  <------ZmHOX2a(1) <---------KAN4(2)  <------------CBF           <---------ATERF1(1) ------WOX13(1)----------->TBP ----------------->AGL1------------>CBF  ----------->GT1---------->ID1   ttgatatagtggccactacaaatgcaggacctgtcccgttgaggaataaccggttttcaattcaattgagagaaggtttattgtattcgtcgtctcccat  25417600                       <-----------HVH21                                      ---------->DOF2             <---------ARR11(3)                 <---------CCA1(2)           ------>ZmHOX2a(1)    <---             --------->ARR11(3) --------->ARR11(3)               --------->ANAC46                ----            *TSS  <---------ZAT14   <----------DOF2             <---------LBD16                 -----         ---------->DOF2        <---------ARR11(3)          <----------DOF2--------->TOE2(3)  -------   ccgataagagagaaagatagtttacagtcacagagatacttttctcactcatctctctctctctttcccgcttccctccttaaaccccaattcttctcct  25417700                                                                                     ------>ZmHOX2a(1)                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                            <-------TEIL                                                                          <-------MYC3                                                                         <---------TGA1a           <---------CCA1(2)                       <----------DOF2<-----------GT1 ------>ZmHOX2a(1) ------At4g35610                      <---------YAB1  =============================bZIP_DOF ----->At4g35610                      --------->ICU4  <----------DOF2 ------>ZmHOX2a(1) ->ZmHOX2a(1)            ----------->GT1 <---------YAB1   <---------AtLEC2------->MYC3 <---------CCA1(2) ---->RAV1(2)  <----------DOF2      --------->YAB1 ================================bZIP_DOF   gctcacaaaaaccctatcttttgggttttgttatacagtgatgatgaaacctgcttctttgcaaggtttctcctcacatgcgtcctcctctatctactcc  25417800            <---------ZAT2            <---------At4g35610                                                          <---------HSFB2a(2)            --------->ZAT2                   <---------ZAT18                      ---------->DOF2            --------->At4g35610       <----------DOF2                          ------>NtERF2           --------->ANAC58         --------->At4g35610                        --------->LBD16           --------->ANAC58         <---------ZAT2                            --------->ANAC46       --------->ANAC58             <---------At4g35610    ---------->ID1   ------>MYB83 --------->HSFB2a(2)       --------->ANAC46             <------NtERF2      <----------DOF2      ------>MYB46(1)       ---       --------->ANAC58------>ZmHOX2a(1)     --------->ZAT18           <-----------GT1--------->ARR11(3)   gatgttcgcaggccagctactactccttcgaaaatggcagcttttagtgccctctcgctttgtccctatactttcaccttccgccaaagctctcgaatta  25417900                  <---------MYB52(1)                 <-----------TGA1                 <-----------HVH21                <---------ANAC58                <---------ANAC58                <---------ANAC55(2)                --------->ANAC55(2)                <---------bZIP60(1)                                                 --------->LBD16           ------>ZmHOX2a(1)                <---------MYB52(1)                  <---------ARR14(2)         <---------ANAC58                  <-------GAMYB                      <---------ANAC58         <---------ANAC58                 <---------MYB46(3)                  <---------ANAC58         <---------ANAC46      ------>ZmHOX2a(1)                         ------>ZmHOX2a(1)      -----       <---------ARR14(2)    ----------->RAV1(2)     <----------DOF2   ----------------->AGL1 <------       --------->ARR14(2)    =========================RAV             ---------->ID1<---------LBD16      <---------MYB52(1)  <---------At4g35610     <-----------GT1  <----------DOF2  ------>ZmHOX2a(1) ------>ZAT6    --------->bZIP60(1)       <-----------RAV1(1) ------>ZmHOX2a(1) --------->ARR14(2)   agtctaccgtttcctgttccgtcacttctgctcctgcttctggtctgttgtttttctttctctcctcgtcttttcctattgggttcctcggaaattaagt  25418000                                                                                         <--------P                                                               --------->AHL20(2)        <---------WOX13(1)                                                               --------->AHL20(1)      <---------MYB46(3)   <---------WOX13(1)                                          <---------AHL20(2)<---------ARR11(3) --------->ATHB12                                        ----------->GT1         <---------GLK1(2) ---->ARR11(3)     <---------ALFIN1                  <---------YAB1      <----------DOF2<-------GAMYB ---TOE2(3)    --------->At4g35610        <---------ARR14(2)  --------->AHL20(2) --------->ARR11(3)<-   tattgattgagtaaatgtgctccactactgtaatgggtttggagtattttgaattagcatagaaaaaaattgaaactttataagatttttggttgatagt  25418100  Previous    Next  AGI:  At5g63420.1    Description:  EMB2746 (EMBRYO DEFECTIVE 2746); catalytic. similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT2G38250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68277.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81787.1); similar to hypothetical protein OsI_007422 [Oryza sativa (indica cultivar-group)] (GB:EAY86189.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279) Range:  from: 25417612    to: 25423194    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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